RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 RNF10Q8N5U6 811 aaKnown RBP13.24□□□□□ -0.29
ATM-222ENST00000533733 ETNPPLQ8TBG4 499 aa13.24□□□□□ -0.29
ATM-222ENST00000533733 NUDT12Q9BQG2 462 aa13.24□□□□□ -0.29
ATM-222ENST00000533733 PUF60Q9UHX1 559 aaKnown RBP13.24□□□□□ -0.29
ATM-222ENST00000533733 TSKSQ9UJT2 592 aa13.24□□□□□ -0.29
ATM-222ENST00000533733 KIAA1024Q9UPX6 916 aa13.24□□□□□ -0.29
ATM-222ENST00000533733 DNM3Q9UQ16 869 aa13.24□□□□□ -0.29
ATM-222ENST00000533733 A0A0U1RQJ8 604 aa13.23□□□□□ -0.29
ATM-222ENST00000533733 TRAF5O00463 557 aa13.23□□□□□ -0.29
ATM-222ENST00000533733 CETN3O15182 167 aa13.23□□□□□ -0.29
ATM-222ENST00000533733 KRT18P05783 430 aaKnown RBP13.23□□□□□ -0.29
ATM-222ENST00000533733 CYP11B2P19099 503 aa13.23□□□□□ -0.29
ATM-222ENST00000533733 ZNF772Q68DY9 489 aaPredicted RBP13.23□□□□□ -0.29
ATM-222ENST00000533733 PDXDC1Q6P996 788 aa13.23□□□□□ -0.29
ATM-222ENST00000533733 GPBP1Q86WP2 473 aa13.23□□□□□ -0.29
ATM-222ENST00000533733 SYT2Q8N9I0 419 aaPredicted RBP13.23□□□□□ -0.29
ATM-222ENST00000533733 ATRIPQ8WXE1 791 aa13.23□□□□□ -0.29
ATM-222ENST00000533733 POLR3CQ9BUI4 534 aaPredicted RBP13.23□□□□□ -0.29
ATM-222ENST00000533733 FUT8Q9BYC5 575 aa13.23□□□□□ -0.29
ATM-222ENST00000533733 IFIH1Q9BYX4 1025 aaKnown RBP13.23□□□□□ -0.29
ATM-222ENST00000533733 MMRN2Q9H8L6 949 aa13.23□□□□□ -0.29
ATM-222ENST00000533733 ARHGEF10LQ9HCE6 1279 aa13.23□□□□□ -0.29
ATM-222ENST00000533733 PRDM10Q9NQV6 1147 aa13.23□□□□□ -0.29
ATM-222ENST00000533733 EMILIN3Q9NT22 766 aa13.23□□□□□ -0.29
ATM-222ENST00000533733 PCDHA2Q9Y5H9 948 aa13.23□□□□□ -0.29
ATM-222ENST00000533733 USP17L15C9J2P7 530 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 USP17L13C9JLJ4 530 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 USP17L11C9JVI0 530 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 USP17L18D6R9N7 530 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 USP17L22D6RA61 530 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 USP17L17D6RBQ6 530 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 USP17L19D6RCP7 530 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 USP17L20D6RJB6 530 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 RBAK-RBAKDNI3L0D1 243 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 AKR1B10O60218 316 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 PLA2G6O60733 806 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 APBA3O96018 575 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 KIF11P52732 1056 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 SLC12A3P55017 1021 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 USP17L24Q0WX57 530 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 ECM1Q16610 540 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 SLC9C1Q4G0N8 1177 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 HERC4Q5GLZ8 1057 aaPredicted RBP13.22□□□□□ -0.29
ATM-222ENST00000533733 BEND6Q5SZJ8 279 aaPredicted RBP13.22□□□□□ -0.29
ATM-222ENST00000533733 USP17L6PQ6QN14 398 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 ZNF572Q7Z3I7 529 aaPredicted RBP13.22□□□□□ -0.29
ATM-222ENST00000533733 TRIM59Q8IWR1 403 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 ZFPM1Q8IX07 1006 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 PCDHA13Q9Y5I0 950 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 ATP8B3O60423 1300 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 CALUO43852 315 aaPredicted RBP13.22□□□□□ -0.29
ATM-222ENST00000533733 NDUFB10O96000 172 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 SERPING1P05155 500 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 GAP43P17677 238 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 TCP1P17987 556 aaKnown RBP13.22□□□□□ -0.29
ATM-222ENST00000533733 ANXA13P27216 316 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 SPIRE1Q08AE8 756 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 TCP10Q12799 353 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 BMT2Q1RMZ1 405 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 ZNF771Q7L3S4 317 aaPredicted RBP13.22□□□□□ -0.29
ATM-222ENST00000533733 SH3BP5LQ7L8J4 393 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 FRMD5Q7Z6J6 570 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 BAP1Q92560 729 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 HPS3Q969F9 1004 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 TANGO6Q9C0B7 1094 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 SH2D4AQ9H788 454 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 VIPAS39Q9H9C1 493 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 METTL14Q9HCE5 456 aaKnown RBP13.22□□□□□ -0.29
ATM-222ENST00000533733 GOPCQ9HD26 462 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 RNF216Q9NWF9 866 aaPredicted RBP13.22□□□□□ -0.29
ATM-222ENST00000533733 ARHGAP20Q9P2F6 1191 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 RNF14Q9UBS8 474 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 TRAF3IP3Q9Y228 551 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 RABGAP1Q9Y3P9 1069 aa13.22□□□□□ -0.29
ATM-222ENST00000533733 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.22□□□□□ -0.29
ATM-222ENST00000533733 MYH10P35580 1976 aa13.21□□□□□ -0.29
ATM-222ENST00000533733 POTEB3A0JP26 581 aa13.21□□□□□ -0.3
ATM-222ENST00000533733 POTECB2RU33 542 aa13.21□□□□□ -0.3
ATM-222ENST00000533733 E9PMD0 336 aa13.21□□□□□ -0.3
ATM-222ENST00000533733 PDXKO00764 312 aa13.21□□□□□ -0.3
ATM-222ENST00000533733 SSBP05455 408 aaKnown RBP eCLIP13.21□□□□□ -0.3
ATM-222ENST00000533733 KLK7P49862 253 aa13.21□□□□□ -0.3
ATM-222ENST00000533733 USP14P54578 494 aa13.21□□□□□ -0.3
ATM-222ENST00000533733 SMC1AQ14683 1233 aaKnown RBP13.21□□□□□ -0.3
ATM-222ENST00000533733 C10orf76Q5T2E6 689 aa13.21□□□□□ -0.3
ATM-222ENST00000533733 FKBP1CQ5VVH2 108 aa13.21□□□□□ -0.3
ATM-222ENST00000533733 TAF3Q5VWG9 929 aa13.21□□□□□ -0.3
ATM-222ENST00000533733 POTEBQ6S5H4 581 aa13.21□□□□□ -0.3
ATM-222ENST00000533733 SIAH1Q8IUQ4 282 aa13.21□□□□□ -0.3
ATM-222ENST00000533733 VPS33BQ9H267 617 aa13.21□□□□□ -0.3
ATM-222ENST00000533733 KCTD10Q9H3F6 313 aa13.21□□□□□ -0.3
ATM-222ENST00000533733 FAM207AQ9NSI2 230 aaPredicted RBP13.21□□□□□ -0.3
ATM-222ENST00000533733 HDAC9Q9UKV0 1011 aa13.21□□□□□ -0.3
ATM-222ENST00000533733 DAAM1Q9Y4D1 1078 aa13.21□□□□□ -0.3
ATM-222ENST00000533733 UBE4BO95155 1302 aa13.21□□□□□ -0.3
ATM-222ENST00000533733 CCDC66A2RUB6 948 aa13.2□□□□□ -0.3
ATM-222ENST00000533733 LRRC53A6NM62 1247 aa13.2□□□□□ -0.3
ATM-222ENST00000533733 SLC16A3O15427 465 aaKnown RBP13.2□□□□□ -0.3
ATM-222ENST00000533733 MED24O75448 989 aa13.2□□□□□ -0.3
ATM-222ENST00000533733 SEC31AO94979 1220 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms