RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 CNKSR3Q6P9H4 555 aa14.27□□□□□ -0.13
CAPRIN1-213ENST00000533562 TMTC3Q6ZXV5 915 aa14.27□□□□□ -0.13
CAPRIN1-213ENST00000533562 DHX32Q7L7V1 743 aaKnown RBP14.27□□□□□ -0.13
CAPRIN1-213ENST00000533562 HERC6Q8IVU3 1022 aa14.27□□□□□ -0.13
CAPRIN1-213ENST00000533562 PPM1EQ8WY54 764 aa14.27□□□□□ -0.13
CAPRIN1-213ENST00000533562 SYMPKQ92797 1274 aaKnown RBP14.27□□□□□ -0.13
CAPRIN1-213ENST00000533562 CDHR1Q96JP9 859 aa14.27□□□□□ -0.13
CAPRIN1-213ENST00000533562 RBM28Q9NW13 759 aaKnown RBP14.27□□□□□ -0.13
CAPRIN1-213ENST00000533562 ABHD14A-ACY1A0A1B0GW23 586 aa14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 SPDYE3A6NKU9 549 aa14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 EFCAB14O75071 495 aa14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 CDC45O75419 566 aa14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 LGALS2P05162 132 aa14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 CA3P07451 260 aa14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 HMGB1P09429 215 aaKnown RBP14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 ZNF200P98182 395 aaPredicted RBP14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 COL9A3Q14050 684 aaPredicted RBP14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 IKBKEQ14164 716 aa14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 ADGRE1Q14246 886 aa14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 KRT32Q14532 448 aa14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 GPNMBQ14956 572 aa14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 SERINC5Q86VE9 423 aa14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 MICU3Q86XE3 530 aa14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 ATP6V0A1Q93050 837 aa14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 GPR20Q99678 358 aa14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 BCAS3Q9H6U6 928 aa14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 ZNF215Q9UL58 517 aaPredicted RBP14.26□□□□□ -0.13
CAPRIN1-213ENST00000533562 EMSYQ7Z589 1322 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 hCG_1642624A0A1W2PR95 340 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 RSPH10B2B2RC85 870 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 MAFGO15525 162 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 TLL1O43897 1013 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 NBNO60934 754 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 RSPH10BP0C881 870 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 SMIM10L2AP0DMW4 78 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 SMIM10L2BP0DMW5 78 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 THPOP40225 353 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 EXOSC10Q01780 885 aaKnown RBP14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 SEMA3FQ13275 785 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 TRIM71Q2Q1W2 868 aaKnown RBP14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 ZNF618Q5T7W0 954 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 APOA5Q6Q788 366 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 HEATR3Q7Z4Q2 680 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 RAB11FIP4Q86YS3 637 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 TEX2Q8IWB9 1127 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 USP38Q8NB14 1042 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 GPRASP2Q96D09 838 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 ZBED2Q9BTP6 218 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 TSPYL2Q9H2G4 693 aaPredicted RBP14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 RNPEPQ9H4A4 650 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 EHMT1Q9H9B1 1298 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 NCOR1O75376 2440 aa14.25□□□□□ -0.13
CAPRIN1-213ENST00000533562 SPTBN5Q9NRC6 3674 aaKnown RBP14.24□□□□□ -0.13
CAPRIN1-213ENST00000533562 ZBTB43O43298 467 aa14.24□□□□□ -0.13
CAPRIN1-213ENST00000533562 WDR5P61964 334 aaKnown RBP14.24□□□□□ -0.13
CAPRIN1-213ENST00000533562 HIC1Q14526 733 aa14.24□□□□□ -0.13
CAPRIN1-213ENST00000533562 CCDC85BQ15834 202 aaPredicted RBP14.24□□□□□ -0.13
CAPRIN1-213ENST00000533562 SKAP1Q86WV1 359 aa14.24□□□□□ -0.13
CAPRIN1-213ENST00000533562 PCDHA6Q9UN73 950 aa14.24□□□□□ -0.13
CAPRIN1-213ENST00000533562 PCDHA8Q9Y5H6 950 aa14.24□□□□□ -0.13
CAPRIN1-213ENST00000533562 GBF1Q92538 1859 aa14.24□□□□□ -0.13
CAPRIN1-213ENST00000533562 TANC1Q9C0D5 1861 aa14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 TREHO43280 583 aa14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 GTPBP6O43824 516 aaPredicted RBP14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 CAND2O75155 1236 aa14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 LGR5O75473 907 aa14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 HOXC8P31273 242 aa14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 FGD1P98174 961 aa14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 SP4Q02446 784 aa14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 MTMR1Q13613 665 aa14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 UBE2SQ16763 222 aa14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 RTN1Q16799 776 aa14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 TJAP1Q5JTD0 557 aa14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 UTP14CQ5TAP6 766 aaKnown RBP14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 TRAF7Q6Q0C0 670 aa14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 RASEFQ8IZ41 740 aa14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 ATXN2LQ8WWM7 1075 aaKnown RBP14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 SEPT1Q8WYJ6 367 aa14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 WNT8BQ93098 351 aa14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 V9GY48 417 aaPredicted RBP14.23□□□□□ -0.13
CAPRIN1-213ENST00000533562 NRCAMQ92823 1304 aa14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 ATP9AO75110 1047 aa14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 FOSP01100 380 aaPredicted RBP14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 ITGB5P18084 799 aa14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 POU3F3P20264 500 aaPredicted RBP14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 NAPAP54920 295 aa14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 TAP1Q03518 808 aa14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 ADCK5Q3MIX3 580 aa14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 CCDC136Q96JN2 1154 aa14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 TCEANC2Q96MN5 208 aa14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 RAD9AQ99638 391 aa14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 GLT8D2Q9H1C3 349 aa14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 CERS4Q9HA82 394 aa14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 JADE2Q9NQC1 790 aa14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 SETD4Q9NVD3 440 aa14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 BRPF3Q9ULD4 1205 aa14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 UBIAD1Q9Y5Z9 338 aa14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 PRRC2BQ5JSZ5 2229 aaKnown RBP14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 XIRP2A4UGR9 3374 aa14.22□□□□□ -0.13
CAPRIN1-213ENST00000533562 MUC3AQ02505 3323 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms