RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 HYIQ5T013 277 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 NCAPH2Q6IBW4 605 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 LRSAM1Q6UWE0 723 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 PLEKHH3Q7Z736 793 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 NLRX1Q86UT6 975 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 GRAMD1CQ8IYS0 662 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 MORC4Q8TE76 937 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 PLIN2Q99541 437 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 TEKT3Q9BXF9 490 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 UNC45AQ9H3U1 944 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 CCDC39Q9UFE4 941 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 LOC102724159A0A0B4J2E5 919 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 MAFGO15525 162 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 KCNA2P16389 499 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 STAT6P42226 847 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 PDE4DQ08499 809 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 PWP2Q15269 919 aaKnown RBP17.94■□□□□ 0.46
TRIM3-213ENST00000533309 RRAGBQ5VZM2 374 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 GAS2L3Q86XJ1 694 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 RASSF8Q8NHQ8 419 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 CALML4Q96GE6 196 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 MTRQ99707 1265 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.93■□□□□ 0.46
TRIM3-213ENST00000533309 SPATA31C2B4DYI2 1134 aa17.93■□□□□ 0.46
TRIM3-213ENST00000533309 MED24O75448 989 aa17.93■□□□□ 0.46
TRIM3-213ENST00000533309 PRR29P0C7W0 189 aa17.93■□□□□ 0.46
TRIM3-213ENST00000533309 ICAM3P32942 547 aa17.93■□□□□ 0.46
TRIM3-213ENST00000533309 PNOCQ13519 176 aa17.93■□□□□ 0.46
TRIM3-213ENST00000533309 GNPTABQ3T906 1256 aa17.93■□□□□ 0.46
TRIM3-213ENST00000533309 KANK3Q6NY19 840 aa17.93■□□□□ 0.46
TRIM3-213ENST00000533309 CEP57L1Q8IYX8 460 aa17.93■□□□□ 0.46
TRIM3-213ENST00000533309 PAGE5Q96GU1 130 aa17.93■□□□□ 0.46
TRIM3-213ENST00000533309 TBC1D22BQ9NU19 505 aa17.93■□□□□ 0.46
TRIM3-213ENST00000533309 POTEB3A0JP26 581 aa17.92■□□□□ 0.46
TRIM3-213ENST00000533309 SLC15A5A6NIM6 579 aa17.92■□□□□ 0.46
TRIM3-213ENST00000533309 SLC26A4O43511 780 aa17.92■□□□□ 0.46
TRIM3-213ENST00000533309 CHMP2AO43633 222 aa17.92■□□□□ 0.46
TRIM3-213ENST00000533309 ALDH1A1P00352 501 aa17.92■□□□□ 0.46
TRIM3-213ENST00000533309 SPATA31C1P0DKV0 1188 aa17.92■□□□□ 0.46
TRIM3-213ENST00000533309 CCT6AP40227 531 aaKnown RBP17.92■□□□□ 0.46
TRIM3-213ENST00000533309 HTRA3P83110 453 aa17.92■□□□□ 0.46
TRIM3-213ENST00000533309 POSTNQ15063 836 aa17.92■□□□□ 0.46
TRIM3-213ENST00000533309 POTEBQ6S5H4 581 aa17.92■□□□□ 0.46
TRIM3-213ENST00000533309 KCNK18Q7Z418 384 aa17.92■□□□□ 0.46
TRIM3-213ENST00000533309 CDHR1Q96JP9 859 aa17.92■□□□□ 0.46
TRIM3-213ENST00000533309 BLOC1S4Q9NUP1 217 aa17.92■□□□□ 0.46
TRIM3-213ENST00000533309 KIAA1468Q9P260 1216 aa17.92■□□□□ 0.46
TRIM3-213ENST00000533309 KDM3AQ9Y4C1 1321 aa17.92■□□□□ 0.46
TRIM3-213ENST00000533309 LOXHD1Q8IVV2 1947 aa17.91■□□□□ 0.46
TRIM3-213ENST00000533309 B4DLN1 442 aa17.91■□□□□ 0.46
TRIM3-213ENST00000533309 DDX39AO00148 427 aaKnown RBP17.91■□□□□ 0.46
TRIM3-213ENST00000533309 RPA1P27694 616 aa17.91■□□□□ 0.46
TRIM3-213ENST00000533309 MORN1Q5T089 497 aa17.91■□□□□ 0.46
TRIM3-213ENST00000533309 HAUS3Q68CZ6 603 aa17.91■□□□□ 0.46
TRIM3-213ENST00000533309 ZNF467Q7Z7K2 595 aaPredicted RBP17.91■□□□□ 0.46
TRIM3-213ENST00000533309 CATSPER3Q86XQ3 398 aa17.91■□□□□ 0.46
TRIM3-213ENST00000533309 REM2Q8IYK8 340 aaPredicted RBP17.91■□□□□ 0.46
TRIM3-213ENST00000533309 ERMNQ8TAM6 284 aa17.91■□□□□ 0.46
TRIM3-213ENST00000533309 EIF2AK1Q9BQI3 630 aaKnown RBP17.91■□□□□ 0.46
TRIM3-213ENST00000533309 CUEDC2Q9H467 287 aa17.91■□□□□ 0.46
TRIM3-213ENST00000533309 STK17AQ9UEE5 414 aa17.91■□□□□ 0.46
TRIM3-213ENST00000533309 TUBE1Q9UJT0 475 aa17.91■□□□□ 0.46
TRIM3-213ENST00000533309 CCNE2O96020 404 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 AFMP43652 599 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 VEGFBP49765 207 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 SP2Q02086 613 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 GSE1Q14687 1217 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 SEPT14Q6ZU15 432 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 STAMQ92783 540 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 CDK5RAP3Q96JB5 506 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 MPHOSPH6Q99547 160 aaKnown RBP17.9■□□□□ 0.46
TRIM3-213ENST00000533309 HSD17B14Q9BPX1 270 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 POLR3CQ9BUI4 534 aaPredicted RBP17.9■□□□□ 0.46
TRIM3-213ENST00000533309 BCAS3Q9H6U6 928 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 KBTBD4Q9NVX7 518 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 STK24Q9Y6E0 443 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 NFASCO94856 1347 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 POTEFA5A3E0 1075 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 ASB14A6NK59 587 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 ECM2O94769 699 aaPredicted RBP17.9■□□□□ 0.46
TRIM3-213ENST00000533309 CTGFP29279 349 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 CASP1P29466 404 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 CYP4A11Q02928 519 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 EPHA7Q15375 998 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 POTEGQ6S5H5 508 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 ARMCX2Q7L311 632 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 EEPD1Q7L9B9 569 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 SPATA20Q8TB22 786 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 NT5C3AQ9H0P0 336 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 MAGEF1Q9HAY2 307 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 RGL1Q9NZL6 768 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 DIS3Q9Y2L1 958 aaKnown RBP17.9■□□□□ 0.46
TRIM3-213ENST00000533309 PCDHA5Q9Y5H7 936 aa17.9■□□□□ 0.46
TRIM3-213ENST00000533309 MYH9P35579 1960 aaKnown RBP17.89■□□□□ 0.45
TRIM3-213ENST00000533309 A0A087WWV3 80 aa17.89■□□□□ 0.45
TRIM3-213ENST00000533309 TYRO3Q06418 890 aa17.89■□□□□ 0.45
TRIM3-213ENST00000533309 DPYDQ12882 1025 aa17.89■□□□□ 0.45
TRIM3-213ENST00000533309 MAMDC4Q6UXC1 1216 aa17.89■□□□□ 0.45
TRIM3-213ENST00000533309 DPP9Q86TI2 863 aa17.89■□□□□ 0.45
TRIM3-213ENST00000533309 FBXO16Q8IX29 292 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms