RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 PTCH2Q9Y6C5 1203 aa12.81□□□□□ -0.36
GMDS-210ENST00000533279 ASTN1O14525 1302 aa12.81□□□□□ -0.36
GMDS-210ENST00000533279 NFASCO94856 1347 aa12.81□□□□□ -0.36
GMDS-210ENST00000533279 ELP1O95163 1332 aa12.81□□□□□ -0.36
GMDS-210ENST00000533279 VWA3AA6NCI4 1184 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 DDX11L8A8MPP1 907 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 WDR64B1ANS9 1081 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 DDX39AO00148 427 aaKnown RBP12.8□□□□□ -0.36
GMDS-210ENST00000533279 SEPT4O43236 478 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 ZEB2O60315 1214 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 CUTAO60888 179 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 GGPS1O95749 300 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 SNAI1O95863 264 aaPredicted RBP12.8□□□□□ -0.36
GMDS-210ENST00000533279 INHAP05111 366 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 ARP10275 920 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 LAMC2Q13753 1193 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 CCDC144BQ3MJ40 725 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 DUSP28Q4G0W2 176 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 KRT79Q5XKE5 535 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 NCAPH2Q6IBW4 605 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 ZNF746Q6NUN9 644 aaPredicted RBP12.8□□□□□ -0.36
GMDS-210ENST00000533279 MIS18BP1Q6P0N0 1132 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 METTL7BQ6UX53 244 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 MIER3Q7Z3K6 550 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 SMAP1Q8IYB5 467 aaPredicted RBP12.8□□□□□ -0.36
GMDS-210ENST00000533279 RDM1Q8NG50 284 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 CYP2W1Q8TAV3 490 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 ETNPPLQ8TBG4 499 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 NEK9Q8TD19 979 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 SLC5A5Q92911 643 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 ZFP91Q96JP5 570 aaPredicted RBP12.8□□□□□ -0.36
GMDS-210ENST00000533279 CCDC43Q96MW1 224 aaKnown RBP12.8□□□□□ -0.36
GMDS-210ENST00000533279 PYM1Q9BRP8 204 aaKnown RBP12.8□□□□□ -0.36
GMDS-210ENST00000533279 FTOQ9C0B1 505 aaKnown RBP eCLIP12.8□□□□□ -0.36
GMDS-210ENST00000533279 HMX1Q9NP08 348 aaPredicted RBP12.8□□□□□ -0.36
GMDS-210ENST00000533279 LRWD1Q9UFC0 647 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 KDM3AQ9Y4C1 1321 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 LCTP09848 1927 aa12.8□□□□□ -0.36
GMDS-210ENST00000533279 CEP350Q5VT06 3117 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 ZSWIM8A7E2V4 1837 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 RBM47A0AV96 593 aaKnown RBP12.79□□□□□ -0.36
GMDS-210ENST00000533279 CHMP2AO43633 222 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 PSAPP07602 524 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 CYBAP13498 195 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 UBA1P22314 1058 aaKnown RBP12.79□□□□□ -0.36
GMDS-210ENST00000533279 UBA7P41226 1012 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 ADCYAP1R1P41586 468 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 TECP42680 631 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 CPT1AP50416 773 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 FXR2P51116 673 aaKnown RBP eCLIP12.79□□□□□ -0.36
GMDS-210ENST00000533279 FAM160B1Q5W0V3 765 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 CCDC73Q6ZRK6 1079 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 OR6J1Q8NGC5 347 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 LENG9Q96B70 501 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 CALML4Q96GE6 196 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 SPATA33Q96N06 139 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 TMEM60Q9H2L4 133 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 AZI2Q9H6S1 392 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 CCDC39Q9UFE4 941 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 RCOR1Q9UKL0 485 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 SRPRBQ9Y5M8 271 aaKnown RBP12.79□□□□□ -0.36
GMDS-210ENST00000533279 DOCK3Q8IZD9 2030 aa12.79□□□□□ -0.36
GMDS-210ENST00000533279 BACH1O14867 736 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 SLC26A4O43511 780 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 DUSP11O75319 330 aaKnown RBP12.78□□□□□ -0.36
GMDS-210ENST00000533279 KCNA2P16389 499 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 SP4Q02446 784 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 CACNB2Q08289 660 aaPredicted RBP12.78□□□□□ -0.36
GMDS-210ENST00000533279 PPP2R5CQ13362 524 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 PDIA5Q14554 519 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 PTPAQ15257 358 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 LY6KQ17RY6 165 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 CELF3Q5SZQ8 465 aaKnown RBP12.78□□□□□ -0.36
GMDS-210ENST00000533279 TAPT1Q6NXT6 567 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 CLEC17AQ6ZS10 378 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 CYFIP1Q7L576 1253 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 TLK2Q86UE8 772 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 ZNF579Q8NAF0 562 aaKnown RBP12.78□□□□□ -0.36
GMDS-210ENST00000533279 ATP6V0A1Q93050 837 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 MTMR9Q96QG7 549 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 NT5C3AQ9H0P0 336 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 DDX41Q9UJV9 622 aaKnown RBP12.78□□□□□ -0.36
GMDS-210ENST00000533279 Q9Y3F1 56 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 DDX49Q9Y6V7 483 aaKnown RBP12.78□□□□□ -0.36
GMDS-210ENST00000533279 LRRC37A2A6NM11 1700 aa12.78□□□□□ -0.36
GMDS-210ENST00000533279 PSMD10O75832 226 aa12.77□□□□□ -0.37
GMDS-210ENST00000533279 RGS20O76081 388 aa12.77□□□□□ -0.37
GMDS-210ENST00000533279 ZNF865P0CJ78 1059 aaPredicted RBP12.77□□□□□ -0.37
GMDS-210ENST00000533279 PRAMEF19Q5SWL8 479 aa12.77□□□□□ -0.37
GMDS-210ENST00000533279 CCDC62Q6P9F0 684 aa12.77□□□□□ -0.37
GMDS-210ENST00000533279 SNX29Q8TEQ0 813 aa12.77□□□□□ -0.37
GMDS-210ENST00000533279 SEPT1Q8WYJ6 367 aa12.77□□□□□ -0.37
GMDS-210ENST00000533279 GDPD2Q9HCC8 539 aa12.77□□□□□ -0.37
GMDS-210ENST00000533279 PDGFCQ9NRA1 345 aa12.77□□□□□ -0.37
GMDS-210ENST00000533279 ZNF215Q9UL58 517 aaPredicted RBP12.77□□□□□ -0.37
GMDS-210ENST00000533279 PCDHA10Q9Y5I2 948 aa12.77□□□□□ -0.37
GMDS-210ENST00000533279 KIAA1217Q5T5P2 1943 aa12.77□□□□□ -0.37
GMDS-210ENST00000533279 MCM3APO60318 1980 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 WNT7AO00755 349 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 DYNC1LI2O43237 492 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms