RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 CTAGE4Q8IX94 777 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 CYP2W1Q8TAV3 490 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 SMCR8Q8TEV9 937 aaPredicted RBP17■□□□□ 0.31
CACNA1E-208ENST00000533229 SCFD1Q8WVM8 642 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 BAP1Q92560 729 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 PURBQ96QR8 312 aaKnown RBP17■□□□□ 0.31
CACNA1E-208ENST00000533229 TSG101Q99816 390 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 UBXN6Q9BZV1 441 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 BMP2KQ9NSY1 1161 aaPredicted RBP17■□□□□ 0.31
CACNA1E-208ENST00000533229 RAB21Q9UL25 225 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 HOXA13P31271 388 aaPredicted RBP17■□□□□ 0.31
CACNA1E-208ENST00000533229 HERC4Q5GLZ8 1057 aaPredicted RBP17■□□□□ 0.31
CACNA1E-208ENST00000533229 SYDE2Q5VT97 1194 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 PAPD7Q5XG87 772 aaKnown RBP17■□□□□ 0.31
CACNA1E-208ENST00000533229 MOXD1Q6UVY6 613 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 CCDC84Q86UT8 332 aaPredicted RBP17■□□□□ 0.31
CACNA1E-208ENST00000533229 CSRNP1Q96S65 589 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 COL4A3BPQ9Y5P4 624 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 ATRNL1Q5VV63 1379 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 SLX4Q8IY92 1834 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 MACROD2A1Z1Q3 448 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 MEIS1O00470 390 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 SPATA31C1P0DKV0 1188 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 BMP3P12645 472 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 ECE1P42892 770 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 BRD3Q15059 726 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 KIAA1755Q5JYT7 1200 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 RRAGAQ7L523 313 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 SLFN12Q8IYM2 578 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 KCTD10Q9H3F6 313 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 ENTPD3O75355 529 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 IPO7O95373 1038 aaKnown RBP16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 EIF4A3P38919 411 aaKnown RBP16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 MMP14P50281 582 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 VAV2P52735 878 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 Q4G0T1 1027 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 RBM26Q5T8P6 1007 aaKnown RBP16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 CCDC65Q8IXS2 484 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 IQCDQ96DY2 449 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 MMS19Q96T76 1030 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 TANGO6Q9C0B7 1094 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 SAR1BQ9Y6B6 198 aa16.99■□□□□ 0.31
CACNA1E-208ENST00000533229 FRMD3A2A2Y4 597 aa16.98■□□□□ 0.31
CACNA1E-208ENST00000533229 HOXA7P31268 230 aaPredicted RBP16.98■□□□□ 0.31
CACNA1E-208ENST00000533229 SREBF1P36956 1147 aa16.98■□□□□ 0.31
CACNA1E-208ENST00000533229 CASP5P51878 434 aa16.98■□□□□ 0.31
CACNA1E-208ENST00000533229 KIF11P52732 1056 aa16.98■□□□□ 0.31
CACNA1E-208ENST00000533229 VSNL1P62760 191 aa16.98■□□□□ 0.31
CACNA1E-208ENST00000533229 APBA1Q02410 837 aa16.98■□□□□ 0.31
CACNA1E-208ENST00000533229 BEND6Q5SZJ8 279 aaPredicted RBP16.98■□□□□ 0.31
CACNA1E-208ENST00000533229 SUGCTQ9HAC7 445 aa16.98■□□□□ 0.31
CACNA1E-208ENST00000533229 EMILIN3Q9NT22 766 aa16.98■□□□□ 0.31
CACNA1E-208ENST00000533229 SPDYE3A6NKU9 549 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 NOL4O94818 638 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 KIF20AO95235 890 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 BTNL9Q6UXG8 535 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 SLC30A10Q6XR72 485 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 HNRNPLLQ8WVV9 542 aaKnown RBP16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 CNKSR1Q969H4 720 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 BCAS3Q9H6U6 928 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 PRR12Q9ULL5 1215 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 PCDHA13Q9Y5I0 950 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 ARFGEF1Q9Y6D6 1849 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 TCP10L2B9ZVM9 353 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 MSH4O15457 936 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 KIF5AQ12840 1032 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 PABPC4Q13310 644 aaKnown RBP eCLIP16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 GIT2Q14161 759 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 SPA17Q15506 151 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 CCDC40Q4G0X9 1142 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 CC2D2BQ6DHV5 1058 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 ZHX3Q9H4I2 956 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 ABCB6Q9NP58 842 aa16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 ZCCHC17Q9NP64 241 aaKnown RBP16.97■□□□□ 0.31
CACNA1E-208ENST00000533229 ZNF646O15015 1829 aaPredicted RBP16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 MAP2K7O14733 419 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 TBX3O15119 743 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 ZNF185O15231 689 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 PPIP5K2O43314 1243 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 LCA5LO95447 670 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 RPA1P27694 616 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 ASTE1Q2TB18 679 aaPredicted RBP16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 HGSNATQ68CP4 663 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 HAUS3Q68CZ6 603 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 PDXDC1Q6P996 788 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 EHBP1Q8NDI1 1231 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 ACER1Q8TDN7 264 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 TBC1D5Q92609 795 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 CAPZA3Q96KX2 299 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 IFIH1Q9BYX4 1025 aaKnown RBP16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 POLD4Q9HCU8 107 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 NLRC4Q9NPP4 1024 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 CAPN6Q9Y6Q1 641 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 PITPNM2Q9BZ72 1349 aa16.96■□□□□ 0.31
CACNA1E-208ENST00000533229 CLRN2A0PK11 232 aa16.96■□□□□ 0.3
CACNA1E-208ENST00000533229 C21orf2O43822 256 aa16.96■□□□□ 0.3
CACNA1E-208ENST00000533229 KRT18P05783 430 aaKnown RBP16.96■□□□□ 0.3
CACNA1E-208ENST00000533229 CIITAP33076 1130 aa16.96■□□□□ 0.3
CACNA1E-208ENST00000533229 TUBB4BP68371 445 aa16.96■□□□□ 0.3
CACNA1E-208ENST00000533229 SMC1AQ14683 1233 aaKnown RBP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms