RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 ITGB1P05556 798 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 ADHFE1Q8IWW8 467 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 SPICE1Q8N0Z3 855 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 FSD1Q9BTV5 496 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 RPP25Q9BUL9 199 aaKnown RBP2.16□□□□□ -2.06
KNL1-211ENST00000533001 PCGF6Q9BYE7 350 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 GTF2IRD1Q9UHL9 959 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 LYSTQ99698 3801 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 LRP4O75096 1905 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 IGLV3-22A0A075B6J6 115 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 TBC1D4O60343 1298 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 TFRCP02786 760 aaKnown RBP2.16□□□□□ -2.06
KNL1-211ENST00000533001 PDHBP11177 359 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 ZKSCAN1P17029 563 aaPredicted RBP2.16□□□□□ -2.06
KNL1-211ENST00000533001 ERVFC1P60507 584 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 SRSF1Q07955 248 aaKnown RBP eCLIP2.16□□□□□ -2.06
KNL1-211ENST00000533001 TCEAL5Q5H9L2 206 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 METTL24Q5JXM2 366 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 MYSM1Q5VVJ2 828 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 VSIG10LQ86VR7 867 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 DBF4BQ8NFT6 615 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 PHOSPHO2Q8TCD6 241 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 SLC22A17Q8WUG5 538 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 MRPL38Q96DV4 380 aaKnown RBP2.16□□□□□ -2.06
KNL1-211ENST00000533001 MUTYHQ9UIF7 546 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 PRR12Q9ULL5 1215 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 ZMYM6O95789 1325 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 USP17L12C9JPN9 530 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 USP17L21D6R901 530 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 WNT7AO00755 349 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 WDR46O15213 610 aaKnown RBP2.16□□□□□ -2.06
KNL1-211ENST00000533001 ICAM3P32942 547 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 OAZ1P54368 228 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 FPGSQ05932 587 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 CCDC57Q2TAC2 916 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 GAB4Q2WGN9 574 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 ZNF618Q5T7W0 954 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 ATF7IPQ6VMQ6 1270 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 RNF135Q8IUD6 432 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 RGS22Q8NE09 1264 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 RNPEPQ9H4A4 650 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 ZNF532Q9HCE3 1301 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 IGKV6-21A0A0C4DH24 114 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 ABLIM1O14639 778 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 RECQL4O94761 1208 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 CHAF1AQ13111 956 aaPredicted RBP2.16□□□□□ -2.06
KNL1-211ENST00000533001 UBE3CQ15386 1083 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 TARBP2Q15633 366 aaKnown RBP2.16□□□□□ -2.06
KNL1-211ENST00000533001 EPC2Q52LR7 807 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 GJD3Q8N144 294 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 TMEM106CQ9BVX2 250 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 LRRC3Q9BY71 257 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 PLAGL2Q9UPG8 496 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 PRRC2AP48634 2157 aaKnown RBP2.16□□□□□ -2.06
KNL1-211ENST00000533001 F8W810 466 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 AKR1A1P14550 325 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 KCNA2P16389 499 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 PMLP29590 882 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 SHC2P98077 582 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 NBPF20Q3BBV1 942 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 NFXL1Q6ZNB6 911 aa2.16□□□□□ -2.06
KNL1-211ENST00000533001 NOL10Q9BSC4 688 aaKnown RBP2.16□□□□□ -2.06
KNL1-211ENST00000533001 M0R2C6 588 aa2.15□□□□□ -2.06
KNL1-211ENST00000533001 CCL23P55773 120 aa2.15□□□□□ -2.06
KNL1-211ENST00000533001 RRP1P56182 461 aaKnown RBP2.15□□□□□ -2.06
KNL1-211ENST00000533001 ZNF697Q5TEC3 545 aa2.15□□□□□ -2.06
KNL1-211ENST00000533001 NFRKBQ6P4R8 1299 aa2.15□□□□□ -2.06
KNL1-211ENST00000533001 TBC1D10CQ8IV04 446 aa2.15□□□□□ -2.06
KNL1-211ENST00000533001 TEX13BQ9BXU2 312 aa2.15□□□□□ -2.06
KNL1-211ENST00000533001 SIL1Q9H173 461 aa2.15□□□□□ -2.06
KNL1-211ENST00000533001 KIAA1109Q2LD37 5005 aa2.15□□□□□ -2.06
KNL1-211ENST00000533001 DIDO1Q9BTC0 2240 aaKnown RBP2.15□□□□□ -2.06
KNL1-211ENST00000533001 LOC102724159A0A0B4J2E5 919 aa2.15□□□□□ -2.06
KNL1-211ENST00000533001 PALM3A6NDB9 673 aaPredicted RBP2.15□□□□□ -2.06
KNL1-211ENST00000533001 SPIRE1Q08AE8 756 aa2.15□□□□□ -2.06
KNL1-211ENST00000533001 MESP2Q0VG99 397 aa2.15□□□□□ -2.06
KNL1-211ENST00000533001 PWP2Q15269 919 aaKnown RBP2.15□□□□□ -2.06
KNL1-211ENST00000533001 OTUD7BQ6GQQ9 843 aa2.15□□□□□ -2.06
KNL1-211ENST00000533001 TMEM179Q6ZVK1 233 aa2.15□□□□□ -2.06
KNL1-211ENST00000533001 FBXO16Q8IX29 292 aaPredicted RBP2.15□□□□□ -2.06
KNL1-211ENST00000533001 MIGA1Q8NAN2 632 aa2.15□□□□□ -2.06
KNL1-211ENST00000533001 CXorf38Q8TB03 319 aa2.15□□□□□ -2.06
KNL1-211ENST00000533001 SYTL5Q8TDW5 730 aaPredicted RBP2.15□□□□□ -2.06
KNL1-211ENST00000533001 MAPK8IP3Q9UPT6 1336 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 HIDE1A8MVS5 230 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 ANHXE9PGG2 379 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 LRRN2O75325 713 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 CCNE2O96020 404 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 RPS6P62753 249 aaKnown RBP2.15□□□□□ -2.07
KNL1-211ENST00000533001 DRP2Q13474 957 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 ALX1Q15699 326 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 GIMAP6Q6P9H5 292 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 TMED8Q6PL24 325 aaPredicted RBP2.15□□□□□ -2.07
KNL1-211ENST00000533001 RSPO2Q6UXX9 243 aaPredicted RBP2.15□□□□□ -2.07
KNL1-211ENST00000533001 CYP2W1Q8TAV3 490 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 RIOX1Q9H6W3 641 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 ZSWIM6Q9HCJ5 1215 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 GPHNQ9NQX3 736 aaPredicted RBP2.15□□□□□ -2.07
KNL1-211ENST00000533001 PLXNA2O75051 1894 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 TTLL13PA6NNM8 815 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms