RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 TBC1D7Q9P0N9 293 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 DDX25Q9UHL0 483 aaKnown RBP10.3□□□□□ -0.76
BDNF-216ENST00000532997 TLDC2A0PJX2 215 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 GMNCA6NCL1 334 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 USP17L3A6NCW0 530 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 USP17L4A6NCW7 530 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 PDE2AO00408 941 aaPredicted RBP10.29□□□□□ -0.76
BDNF-216ENST00000532997 KLRC4O43908 158 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 FERP16591 822 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 STAT1P42224 750 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 PLCB4Q15147 1175 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 CDC37Q16543 378 aaPredicted RBP10.29□□□□□ -0.76
BDNF-216ENST00000532997 DENND2CQ68D51 928 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 TAOK1Q7L7X3 1001 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 USP17L1Q7RTZ2 530 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 ADAMTS1Q9UHI8 967 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 MTUS1Q9ULD2 1270 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 COL5A2P05997 1499 aaPredicted RBP10.29□□□□□ -0.76
BDNF-216ENST00000532997 TRIM37O94972 964 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 ATP5DP30049 168 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 HNRNPH1P31943 449 aaKnown RBP10.29□□□□□ -0.76
BDNF-216ENST00000532997 NAB2Q15742 525 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 SH2D3CQ8N5H7 860 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 NKX2-3Q8TAU0 364 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 PURBQ96QR8 312 aaKnown RBP10.29□□□□□ -0.76
BDNF-216ENST00000532997 CCT8L2Q96SF2 557 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 SLITRK6Q9H5Y7 841 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 DNM3Q9UQ16 869 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 SRRM3A6NNA2 597 aaPredicted RBP10.29□□□□□ -0.76
BDNF-216ENST00000532997 AFPP02771 609 aaKnown RBP10.29□□□□□ -0.76
BDNF-216ENST00000532997 PLEKP08567 350 aaPredicted RBP10.29□□□□□ -0.76
BDNF-216ENST00000532997 FGRP09769 529 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 SMARCA1P28370 1054 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 CARSP49589 748 aaKnown RBP10.29□□□□□ -0.76
BDNF-216ENST00000532997 SF3B3Q15393 1217 aaKnown RBP10.29□□□□□ -0.76
BDNF-216ENST00000532997 PTGISQ16647 500 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 ERFEQ4G0M1 354 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 COBLL1Q53SF7 1204 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 UBL4BQ8N7F7 174 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 RPGRQ92834 1020 aaKnown RBP10.29□□□□□ -0.76
BDNF-216ENST00000532997 ARL8AQ96BM9 186 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 DYNLL2Q96FJ2 89 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 CALR3Q96L12 384 aaKnown RBP10.29□□□□□ -0.76
BDNF-216ENST00000532997 PIGSQ96S52 555 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 FAM205AQ6ZU69 1335 aa10.29□□□□□ -0.76
BDNF-216ENST00000532997 ATXN2Q99700 1313 aaKnown RBP10.29□□□□□ -0.76
BDNF-216ENST00000532997 ESYT3A0FGR9 886 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 NTSR2O95665 410 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 FAM107AO95990 144 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 TNFAIP3P21580 790 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 IBSPP21815 317 aaPredicted RBP10.28□□□□□ -0.76
BDNF-216ENST00000532997 GUCY1A3Q02108 690 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 SEL1L2Q5TEA6 688 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 ADGRA1Q86SQ6 560 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 CCDC197Q8NCU1 140 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 GPCPD1Q9NPB8 672 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 DIS3Q9Y2L1 958 aaKnown RBP10.28□□□□□ -0.76
BDNF-216ENST00000532997 PKD1L3Q7Z443 1732 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 FAM13AO94988 1023 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 KRT14P02533 472 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 NR2F2P24468 414 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 PRDX5P30044 214 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 PPP2R2AP63151 447 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 COASYQ13057 564 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 TRAF1Q13077 416 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 EZH2Q15910 746 aaKnown RBP10.28□□□□□ -0.76
BDNF-216ENST00000532997 NAA35Q5VZE5 725 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 FBXW10Q5XX13 1052 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 PPP1R18Q6NYC8 613 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 SLFN12Q8IYM2 578 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 U2AF1L4Q8WU68 220 aaKnown RBP10.28□□□□□ -0.76
BDNF-216ENST00000532997 IFT74Q96LB3 600 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 MTRQ99707 1265 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 MXD3Q9BW11 206 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 EMILIN3Q9NT22 766 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 CHD4Q14839 1912 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 NUP188Q5SRE5 1749 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 ESYT2A0FGR8 921 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 WNT7AO00755 349 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 RGS16O15492 202 aaPredicted RBP10.28□□□□□ -0.76
BDNF-216ENST00000532997 VIMP08670 466 aaKnown RBP10.28□□□□□ -0.76
BDNF-216ENST00000532997 LMNB1P20700 586 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 FXR2P51116 673 aaKnown RBP eCLIP10.28□□□□□ -0.76
BDNF-216ENST00000532997 IL17AQ16552 155 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 NAALADL2Q58DX5 795 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 AGBL2Q5U5Z8 902 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 ALKBH5Q6P6C2 394 aaKnown RBP10.28□□□□□ -0.76
BDNF-216ENST00000532997 FBXO33Q7Z6M2 555 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 EIF1ADQ8N9N8 165 aaKnown RBP10.28□□□□□ -0.76
BDNF-216ENST00000532997 JPH2Q9BR39 696 aaPredicted RBP10.28□□□□□ -0.76
BDNF-216ENST00000532997 ISCUQ9H1K1 167 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 TACC3Q9Y6A5 838 aa10.28□□□□□ -0.76
BDNF-216ENST00000532997 TRPM3Q9HCF6 1732 aaPredicted RBP10.28□□□□□ -0.76
BDNF-216ENST00000532997 MYMKA6NI61 221 aa10.27□□□□□ -0.76
BDNF-216ENST00000532997 SLC26A4O43511 780 aa10.27□□□□□ -0.76
BDNF-216ENST00000532997 MYBL2P10244 700 aa10.27□□□□□ -0.76
BDNF-216ENST00000532997 HSPA6P17066 643 aa10.27□□□□□ -0.76
BDNF-216ENST00000532997 CALCOCO2Q13137 446 aa10.27□□□□□ -0.76
BDNF-216ENST00000532997 ZNF572Q7Z3I7 529 aaPredicted RBP10.27□□□□□ -0.76
BDNF-216ENST00000532997 MREGQ8N565 214 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms