RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 SLC12A3P55017 1021 aa16.91■□□□□ 0.3
SRPRA-206ENST00000532259 REXO1L1PQ8IX06 675 aa16.91■□□□□ 0.3
SRPRA-206ENST00000532259 MB21D1Q8N884 522 aa16.91■□□□□ 0.3
SRPRA-206ENST00000532259 PIGOQ8TEQ8 1089 aa16.91■□□□□ 0.3
SRPRA-206ENST00000532259 PCMTD1Q96MG8 357 aaPredicted RBP16.91■□□□□ 0.3
SRPRA-206ENST00000532259 BMP2KQ9NSY1 1161 aaPredicted RBP16.91■□□□□ 0.3
SRPRA-206ENST00000532259 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.91■□□□□ 0.3
SRPRA-206ENST00000532259 DNAI1Q9UI46 699 aa16.91■□□□□ 0.3
SRPRA-206ENST00000532259 V9GYY5 206 aaPredicted RBP16.91■□□□□ 0.3
SRPRA-206ENST00000532259 PCNTO95613 3336 aa16.91■□□□□ 0.3
SRPRA-206ENST00000532259 POLR2AP24928 1970 aaKnown RBP16.91■□□□□ 0.3
SRPRA-206ENST00000532259 LGALS16A8MUM7 142 aa16.91■□□□□ 0.3
SRPRA-206ENST00000532259 TBX3O15119 743 aa16.91■□□□□ 0.3
SRPRA-206ENST00000532259 EEF1GP26641 437 aaKnown RBP16.91■□□□□ 0.3
SRPRA-206ENST00000532259 HAUS3Q68CZ6 603 aa16.91■□□□□ 0.3
SRPRA-206ENST00000532259 CENPPQ6IPU0 288 aa16.91■□□□□ 0.3
SRPRA-206ENST00000532259 KIF18AQ8NI77 898 aa16.91■□□□□ 0.3
SRPRA-206ENST00000532259 FAM20AQ96MK3 541 aa16.91■□□□□ 0.3
SRPRA-206ENST00000532259 NOC4LQ9BVI4 516 aaKnown RBP16.91■□□□□ 0.3
SRPRA-206ENST00000532259 DDNO94850 711 aaPredicted RBP16.9■□□□□ 0.3
SRPRA-206ENST00000532259 TPM1P09493 284 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 RPA1P27694 616 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 KRT9P35527 623 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 FAM26FQ5R3K3 315 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 OTOP1Q7RTM1 612 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 TRMT1LQ7Z2T5 733 aaKnown RBP16.9■□□□□ 0.3
SRPRA-206ENST00000532259 TPH2Q8IWU9 490 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 EIF2AK1Q9BQI3 630 aaKnown RBP16.9■□□□□ 0.3
SRPRA-206ENST00000532259 BHMT2Q9H2M3 363 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 ZHX2Q9Y6X8 837 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 TTC26A0AVF1 554 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 DYNC1I1O14576 645 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 ITGB5P18084 799 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 HMGCS2P54868 508 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 CEP55Q53EZ4 464 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 LRCH2Q5VUJ6 765 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 MCTP2Q6DN12 878 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 ERMNQ8TAM6 284 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 ZNF507Q8TCN5 953 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 PANX2Q96RD6 677 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 IRX2Q9BZI1 471 aaPredicted RBP16.9■□□□□ 0.3
SRPRA-206ENST00000532259 FHDC1Q9C0D6 1143 aaPredicted RBP16.9■□□□□ 0.3
SRPRA-206ENST00000532259 LZTFL1Q9NQ48 299 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 KCND1Q9NSA2 647 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 RIPK3Q9Y572 518 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 PAXBP1Q9Y5B6 917 aa16.9■□□□□ 0.3
SRPRA-206ENST00000532259 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.9■□□□□ 0.32e-13■□□□□ 8.2
SRPRA-206ENST00000532259 RSPH10B2B2RC85 870 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 FANCGO15287 622 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 RSPH10BP0C881 870 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 PTPRAP18433 802 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 CASP5P51878 434 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 TBC1D8BQ0IIM8 1120 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 LPAR1Q92633 364 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 ATG4CQ96DT6 458 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 MRPL44Q9H9J2 332 aaKnown RBP16.89■□□□□ 0.29
SRPRA-206ENST00000532259 SLC38A10Q9HBR0 1119 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 ABHD10Q9NUJ1 306 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 WRAP73Q9P2S5 460 aaPredicted RBP16.89■□□□□ 0.29
SRPRA-206ENST00000532259 DNM3Q9UQ16 869 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 PCDHA2Q9Y5H9 948 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 SFI1A8K8P3 1242 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 PSMD10O75832 226 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 KCNJ6P48051 423 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 SYCP1Q15431 976 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 MIIPQ5JXC2 388 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 CNGA4Q8IV77 575 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 SCYL3Q8IZE3 742 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 MYOCDQ8IZQ8 938 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 LRRC27Q9C0I9 530 aa16.89■□□□□ 0.29
SRPRA-206ENST00000532259 HSD17B4P51659 736 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 ERVK-24P63145 666 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 GUF1Q8N442 669 aaKnown RBP16.88■□□□□ 0.29
SRPRA-206ENST00000532259 ACRBPQ8NEB7 543 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 DYDC2Q96IM9 177 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 RUSC1Q9BVN2 902 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 WDR11Q9BZH6 1224 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 PPP1R9AQ9ULJ8 1098 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 ITIH6Q6UXX5 1313 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 RASSF10A6NK89 507 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 ZSCAN12O43309 604 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 GAS7O60861 476 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 SLITRK3O94933 977 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 BACE1P56817 501 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 SEMA3FQ13275 785 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 CCDC65Q8IXS2 484 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 CCDC155Q8N6L0 562 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 CHP1Q99653 195 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 REEP2Q9BRK0 252 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 ZNF577Q9BSK1 485 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 AGPAT5Q9NUQ2 364 aa16.88■□□□□ 0.29
SRPRA-206ENST00000532259 SSC5DA1L4H1 1573 aa16.87■□□□□ 0.29
SRPRA-206ENST00000532259 TRAF5O00463 557 aa16.87■□□□□ 0.29
SRPRA-206ENST00000532259 PEX10O60683 326 aa16.87■□□□□ 0.29
SRPRA-206ENST00000532259 TRIM21P19474 475 aaKnown RBP16.87■□□□□ 0.29
SRPRA-206ENST00000532259 GIT2Q14161 759 aa16.87■□□□□ 0.29
SRPRA-206ENST00000532259 COBLL1Q53SF7 1204 aa16.87■□□□□ 0.29
SRPRA-206ENST00000532259 TRIM65Q6PJ69 517 aa16.87■□□□□ 0.29
SRPRA-206ENST00000532259 SLC5A5Q92911 643 aa16.87■□□□□ 0.29
SRPRA-206ENST00000532259 TAAR1Q96RJ0 339 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms