RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 HSDL1Q3SXM5 330 aa12.35□□□□□ -0.43
GPATCH4-216ENST00000531900 C9orf50Q5SZB4 431 aa12.35□□□□□ -0.43
GPATCH4-216ENST00000531900 VPS54Q9P1Q0 977 aa12.35□□□□□ -0.43
GPATCH4-216ENST00000531900 PCDHA4Q9UN74 947 aa12.35□□□□□ -0.43
GPATCH4-216ENST00000531900 LIMCH1Q9UPQ0 1083 aa12.35□□□□□ -0.43
GPATCH4-216ENST00000531900 STXBP5LQ9Y2K9 1186 aa12.35□□□□□ -0.43
GPATCH4-216ENST00000531900 KAT6AQ92794 2004 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 ADAMTS3O15072 1205 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 ATP9AO75110 1047 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 LARGE1O95461 756 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 TIMP1P01033 207 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 MYL3P08590 195 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 FDPSP14324 419 aaKnown RBP12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 ITGB8P26012 769 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 USP11P51784 963 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 SMAD3P84022 425 aaKnown RBP12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 ARHGAP4P98171 946 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 MTMR1Q13613 665 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 RABEP1Q15276 862 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 ZNF697Q5TEC3 545 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 SLC17A8Q8NDX2 589 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 ZFP91Q96JP5 570 aaPredicted RBP12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 RNPC3Q96LT9 517 aaKnown RBP12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 ZSCAN31Q96LW9 406 aaPredicted RBP12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 SPATA33Q96N06 139 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 C16orf70Q9BSU1 422 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 KATNAL1Q9BW62 490 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 BCAS3Q9H6U6 928 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 MLXIPQ9HAP2 919 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 KCNH7Q9NS40 1196 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 TMEM260Q9NX78 707 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 NFASCO94856 1347 aa12.34□□□□□ -0.43
GPATCH4-216ENST00000531900 TRIP12Q14669 1992 aaPredicted RBP12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 IGLV3-22A0A075B6J6 115 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 EDIL3O43854 480 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 SUPT20HL2P0C7V6 817 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 PSMC6P62333 389 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 ST3GAL1Q11201 340 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 NBPF20Q3BBV1 942 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 JAKMIP3Q5VZ66 844 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 MFSD5Q6N075 450 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 CYFIP1Q7L576 1253 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 TMEM199Q8N511 208 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 NSUN7Q8NE18 718 aaKnown RBP12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 CYP2W1Q8TAV3 490 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 WASF1Q92558 559 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 TBC1D32Q96NH3 1257 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 GPR20Q99678 358 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 LLPHQ9BRT6 129 aaKnown RBP12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 PHF20Q9BVI0 1012 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 BACH2Q9BYV9 841 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 UPF2Q9HAU5 1272 aaKnown RBP12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 SH2B1Q9NRF2 756 aaPredicted RBP12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 GTF3C3Q9Y5Q9 886 aa12.33□□□□□ -0.44
GPATCH4-216ENST00000531900 FAM86B1E9PN63 330 aa12.32□□□□□ -0.44
GPATCH4-216ENST00000531900 B4GALT4O60513 344 aa12.32□□□□□ -0.44
GPATCH4-216ENST00000531900 PPFIA3O75145 1194 aa12.32□□□□□ -0.44
GPATCH4-216ENST00000531900 FAM86B2P0C5J1 330 aa12.32□□□□□ -0.44
GPATCH4-216ENST00000531900 XBP1P17861 261 aa12.32□□□□□ -0.44
GPATCH4-216ENST00000531900 HOXC8P31273 242 aa12.32□□□□□ -0.44
GPATCH4-216ENST00000531900 NLRP5P59047 1200 aa12.32□□□□□ -0.44
GPATCH4-216ENST00000531900 PPIGQ13427 754 aaKnown RBP eCLIP12.32□□□□□ -0.44
GPATCH4-216ENST00000531900 BLIDQ8IZY5 108 aa12.32□□□□□ -0.44
GPATCH4-216ENST00000531900 NECAB1Q8N987 351 aa12.32□□□□□ -0.44
GPATCH4-216ENST00000531900 PGBD1Q96JS3 809 aa12.32□□□□□ -0.44
GPATCH4-216ENST00000531900 AIFM3Q96NN9 605 aa12.32□□□□□ -0.44
GPATCH4-216ENST00000531900 ORC3Q9UBD5 711 aaPredicted RBP12.32□□□□□ -0.44
GPATCH4-216ENST00000531900 CYP3A7-CYP3A51PA0A087WV96 503 aa12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 H3BRB1 525 aa12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 DHX15O43143 795 aaKnown RBP12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 ATG7O95352 703 aa12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 LGALS2P05162 132 aa12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 ARP10275 920 aa12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 CYP3A7P24462 503 aa12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 PSEN2P49810 448 aa12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 SETQ01105 290 aaPredicted RBP12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 MOXD1Q6UVY6 613 aa12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 SEPT1Q8WYJ6 367 aa12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 LENG9Q96B70 501 aa12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 FAM161BQ96MY7 647 aa12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 MBOAT7Q96N66 472 aa12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 CTAGE1Q96RT6 745 aa12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 TRPV6Q9H1D0 765 aa12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 TUT1Q9H6E5 874 aaKnown RBP12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 AGO4Q9HCK5 861 aaKnown RBP12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 GTF2IRD1Q9UHL9 959 aa12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 WDR81Q562E7 1941 aa12.31□□□□□ -0.44
GPATCH4-216ENST00000531900 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 GSTTP1A0A1W2PQM5 241 aa12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 PITPNM1O00562 1244 aa12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 NOP56O00567 594 aaKnown RBP12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 LGR5O75473 907 aa12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 EPHB4P54760 987 aa12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 RBL2Q08999 1139 aa12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 ITGB3BPQ13352 177 aaPredicted RBP12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 MFSD10Q14728 455 aa12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 KIAA0753Q2KHM9 967 aa12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 KRT25Q7Z3Z0 450 aa12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 RASGRP4Q8TDF6 673 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms