RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 BCAS3Q9H6U6 928 aa16.44■□□□□ 0.22
CPSF1-206ENST00000531480 ALPK3Q96L96 1907 aa16.44■□□□□ 0.22
CPSF1-206ENST00000531480 WDR81Q562E7 1941 aa16.43■□□□□ 0.22
CPSF1-206ENST00000531480 KBTBD13C9JR72 458 aa16.43■□□□□ 0.22
CPSF1-206ENST00000531480 ASGR1P07306 291 aa16.43■□□□□ 0.22
CPSF1-206ENST00000531480 MMP3P08254 477 aa16.43■□□□□ 0.22
CPSF1-206ENST00000531480 ZNF76P36508 570 aa16.43■□□□□ 0.22
CPSF1-206ENST00000531480 ACLYP53396 1101 aa16.43■□□□□ 0.22
CPSF1-206ENST00000531480 HSDL1Q3SXM5 330 aa16.43■□□□□ 0.22
CPSF1-206ENST00000531480 C1orf53Q5VUE5 145 aa16.43■□□□□ 0.22
CPSF1-206ENST00000531480 DHX37Q8IY37 1157 aaKnown RBP16.43■□□□□ 0.22
CPSF1-206ENST00000531480 ETNPPLQ8TBG4 499 aa16.43■□□□□ 0.22
CPSF1-206ENST00000531480 PAWRQ96IZ0 340 aaKnown RBP16.43■□□□□ 0.22
CPSF1-206ENST00000531480 IPO5O00410 1097 aaKnown RBP16.42■□□□□ 0.22
CPSF1-206ENST00000531480 MSH4O15457 936 aa16.42■□□□□ 0.22
CPSF1-206ENST00000531480 KPNA6O60684 536 aa16.42■□□□□ 0.22
CPSF1-206ENST00000531480 PPFIA4O75335 1185 aa16.42■□□□□ 0.22
CPSF1-206ENST00000531480 CABYRO75952 493 aa16.42■□□□□ 0.22
CPSF1-206ENST00000531480 TDP2O95551 362 aa16.42■□□□□ 0.22
CPSF1-206ENST00000531480 SYT1P21579 422 aa16.42■□□□□ 0.22
CPSF1-206ENST00000531480 TRAPPC10P48553 1259 aa16.42■□□□□ 0.22
CPSF1-206ENST00000531480 PURAQ00577 322 aaKnown RBP16.42■□□□□ 0.22
CPSF1-206ENST00000531480 BEX3Q00994 111 aa16.42■□□□□ 0.22
CPSF1-206ENST00000531480 SNX17Q15036 470 aa16.42■□□□□ 0.22
CPSF1-206ENST00000531480 PRR16Q569H4 304 aa16.42■□□□□ 0.22
CPSF1-206ENST00000531480 CYFIP1Q7L576 1253 aa16.42■□□□□ 0.22
CPSF1-206ENST00000531480 NECAB2Q7Z6G3 386 aa16.42■□□□□ 0.22
CPSF1-206ENST00000531480 AFG1LQ8WV93 481 aa16.42■□□□□ 0.22
CPSF1-206ENST00000531480 C11orf49Q9H6J7 331 aa16.42■□□□□ 0.22
CPSF1-206ENST00000531480 KCNMB3Q9NPA1 279 aa16.42■□□□□ 0.22
CPSF1-206ENST00000531480 ELP1O95163 1332 aa16.42■□□□□ 0.22
CPSF1-206ENST00000531480 A0A1W2PQ45 241 aaPredicted RBP16.41■□□□□ 0.22
CPSF1-206ENST00000531480 A0A1W2PQY0 241 aa16.41■□□□□ 0.22
CPSF1-206ENST00000531480 WNT7AO00755 349 aa16.41■□□□□ 0.22
CPSF1-206ENST00000531480 TBX3O15119 743 aa16.41■□□□□ 0.22
CPSF1-206ENST00000531480 SLC37A4O43826 429 aa16.41■□□□□ 0.22
CPSF1-206ENST00000531480 ZEB2O60315 1214 aa16.41■□□□□ 0.22
CPSF1-206ENST00000531480 PDIA4P13667 645 aaKnown RBP16.41■□□□□ 0.22
CPSF1-206ENST00000531480 ORC2Q13416 577 aaPredicted RBP16.41■□□□□ 0.22
CPSF1-206ENST00000531480 LETM2Q2VYF4 491 aa16.41■□□□□ 0.22
CPSF1-206ENST00000531480 BRDTQ58F21 947 aaPredicted RBP16.41■□□□□ 0.22
CPSF1-206ENST00000531480 B3GNT9Q6UX72 402 aa16.41■□□□□ 0.22
CPSF1-206ENST00000531480 SLC5A5Q92911 643 aa16.41■□□□□ 0.22
CPSF1-206ENST00000531480 SPATA33Q96N06 139 aa16.41■□□□□ 0.22
CPSF1-206ENST00000531480 RIT2Q99578 217 aa16.41■□□□□ 0.22
CPSF1-206ENST00000531480 GPR20Q99678 358 aa16.41■□□□□ 0.22
CPSF1-206ENST00000531480 MLXIPQ9HAP2 919 aa16.41■□□□□ 0.22
CPSF1-206ENST00000531480 TBC1D22BQ9NU19 505 aa16.41■□□□□ 0.22
CPSF1-206ENST00000531480 POLR3EQ9NVU0 708 aa16.41■□□□□ 0.22
CPSF1-206ENST00000531480 H3BQV1 296 aa16.4■□□□□ 0.22
CPSF1-206ENST00000531480 ATG7O95352 703 aa16.4■□□□□ 0.22
CPSF1-206ENST00000531480 DGKDQ16760 1214 aa16.4■□□□□ 0.22
CPSF1-206ENST00000531480 SLC43A3Q8NBI5 491 aa16.4■□□□□ 0.22
CPSF1-206ENST00000531480 ZNF577Q9BSK1 485 aa16.4■□□□□ 0.22
CPSF1-206ENST00000531480 SEZ6LQ9BYH1 1024 aa16.4■□□□□ 0.22
CPSF1-206ENST00000531480 JPH1Q9HDC5 661 aaPredicted RBP16.4■□□□□ 0.22
CPSF1-206ENST00000531480 SLC9A2Q9UBY0 812 aa16.4■□□□□ 0.22
CPSF1-206ENST00000531480 DDX25Q9UHL0 483 aaKnown RBP16.4■□□□□ 0.22
CPSF1-206ENST00000531480 TELO2Q9Y4R8 837 aa16.4■□□□□ 0.22
CPSF1-206ENST00000531480 GSTTP1A0A1W2PQM5 241 aa16.39■□□□□ 0.21
CPSF1-206ENST00000531480 CCNT1O60563 726 aaKnown RBP16.39■□□□□ 0.21
CPSF1-206ENST00000531480 PSMD10O75832 226 aa16.39■□□□□ 0.21
CPSF1-206ENST00000531480 F2P00734 622 aa16.39■□□□□ 0.21
CPSF1-206ENST00000531480 TOB1P50616 345 aaPredicted RBP16.39■□□□□ 0.21
CPSF1-206ENST00000531480 KAT2BQ92831 832 aa16.39■□□□□ 0.21
CPSF1-206ENST00000531480 HAS1Q92839 578 aa16.39■□□□□ 0.21
CPSF1-206ENST00000531480 FAM20AQ96MK3 541 aa16.39■□□□□ 0.21
CPSF1-206ENST00000531480 SDF4Q9BRK5 362 aa16.39■□□□□ 0.21
CPSF1-206ENST00000531480 C16orf70Q9BSU1 422 aa16.39■□□□□ 0.21
CPSF1-206ENST00000531480 IGKV6D-21A0A0A0MT36 114 aa16.38■□□□□ 0.21
CPSF1-206ENST00000531480 HAS3O00219 553 aa16.38■□□□□ 0.21
CPSF1-206ENST00000531480 CCNE2O96020 404 aa16.38■□□□□ 0.21
CPSF1-206ENST00000531480 CDK7P50613 346 aa16.38■□□□□ 0.21
CPSF1-206ENST00000531480 ZNF746Q6NUN9 644 aaPredicted RBP16.38■□□□□ 0.21
CPSF1-206ENST00000531480 CXCL17Q6UXB2 119 aa16.38■□□□□ 0.21
CPSF1-206ENST00000531480 BRAPQ7Z569 592 aa16.38■□□□□ 0.21
CPSF1-206ENST00000531480 SEPT1Q8WYJ6 367 aa16.38■□□□□ 0.21
CPSF1-206ENST00000531480 GLT1D1Q96MS3 346 aa16.38■□□□□ 0.21
CPSF1-206ENST00000531480 MTMR9Q96QG7 549 aa16.38■□□□□ 0.21
CPSF1-206ENST00000531480 MTG1Q9BT17 334 aaPredicted RBP16.38■□□□□ 0.21
CPSF1-206ENST00000531480 SENP6Q9GZR1 1112 aaPredicted RBP16.38■□□□□ 0.21
CPSF1-206ENST00000531480 FOXD4L1Q9NU39 408 aa16.38■□□□□ 0.21
CPSF1-206ENST00000531480 MTMR6Q9Y217 621 aa16.38■□□□□ 0.21
CPSF1-206ENST00000531480 MYH15Q9Y2K3 1946 aa16.38■□□□□ 0.21
CPSF1-206ENST00000531480 GRIN2DO15399 1336 aa16.38■□□□□ 0.21
CPSF1-206ENST00000531480 STX6O43752 255 aa16.37■□□□□ 0.21
CPSF1-206ENST00000531480 LGR5O75473 907 aa16.37■□□□□ 0.21
CPSF1-206ENST00000531480 ACTR2P61160 394 aa16.37■□□□□ 0.21
CPSF1-206ENST00000531480 KRT76Q01546 638 aa16.37■□□□□ 0.21
CPSF1-206ENST00000531480 GNL2Q13823 731 aaKnown RBP16.37■□□□□ 0.21
CPSF1-206ENST00000531480 RILPL1Q5EBL4 403 aa16.37■□□□□ 0.21
CPSF1-206ENST00000531480 ABHD15Q6UXT9 468 aa16.37■□□□□ 0.21
CPSF1-206ENST00000531480 SLC39A5Q6ZMH5 540 aa16.37■□□□□ 0.21
CPSF1-206ENST00000531480 POTEDQ86YR6 584 aa16.37■□□□□ 0.21
CPSF1-206ENST00000531480 SMAP1Q8IYB5 467 aaPredicted RBP16.37■□□□□ 0.21
CPSF1-206ENST00000531480 IPO9Q96P70 1041 aaKnown RBP16.37■□□□□ 0.21
CPSF1-206ENST00000531480 STARD7Q9NQZ5 370 aa16.37■□□□□ 0.21
CPSF1-206ENST00000531480 PKD2L1Q9P0L9 805 aa16.37■□□□□ 0.21
CPSF1-206ENST00000531480 EMSYQ7Z589 1322 aa16.37■□□□□ 0.21
CPSF1-206ENST00000531480 A0A0U1RQG5 324 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms