RNA–Protein interactions for RNA: ENST00000530624.5

CTSB-218, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-218ENST00000530624 CAGE1Q8TC20 777 aa16.47■□□□□ 0.23
CTSB-218ENST00000530624 RNPC3Q96LT9 517 aaKnown RBP16.47■□□□□ 0.23
CTSB-218ENST00000530624 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.47■□□□□ 0.238e-8■■■■■ 37.7
CTSB-218ENST00000530624 MXRA8Q9BRK3 442 aa16.47■□□□□ 0.23
CTSB-218ENST00000530624 BCAS3Q9H6U6 928 aa16.47■□□□□ 0.23
CTSB-218ENST00000530624 NCOA5Q9HCD5 579 aaKnown RBP16.47■□□□□ 0.23
CTSB-218ENST00000530624 SH3GLB2Q9NR46 395 aa16.47■□□□□ 0.23
CTSB-218ENST00000530624 H3BRB1 525 aa16.46■□□□□ 0.23
CTSB-218ENST00000530624 NOP56O00567 594 aaKnown RBP16.46■□□□□ 0.23
CTSB-218ENST00000530624 ATP9AO75110 1047 aa16.46■□□□□ 0.23
CTSB-218ENST00000530624 LGALS2P05162 132 aa16.46■□□□□ 0.23
CTSB-218ENST00000530624 PFKMP08237 780 aa16.46■□□□□ 0.23
CTSB-218ENST00000530624 RFC2P35250 354 aa16.46■□□□□ 0.23
CTSB-218ENST00000530624 CCT2P78371 535 aaKnown RBP16.46■□□□□ 0.23
CTSB-218ENST00000530624 BFSP2Q13515 415 aa16.46■□□□□ 0.23
CTSB-218ENST00000530624 PTGISQ16647 500 aa16.46■□□□□ 0.23
CTSB-218ENST00000530624 GDF6Q6KF10 455 aaPredicted RBP16.46■□□□□ 0.23
CTSB-218ENST00000530624 NIPA1Q7RTP0 329 aa16.46■□□□□ 0.23
CTSB-218ENST00000530624 RPUSD2Q8IZ73 545 aaKnown RBP16.46■□□□□ 0.23
CTSB-218ENST00000530624 CCDC148Q8NFR7 591 aa16.46■□□□□ 0.23
CTSB-218ENST00000530624 CRYGNQ8WXF5 182 aa16.46■□□□□ 0.23
CTSB-218ENST00000530624 TUT1Q9H6E5 874 aaKnown RBP16.46■□□□□ 0.23
CTSB-218ENST00000530624 C6orf50Q9HD87 102 aa16.46■□□□□ 0.23
CTSB-218ENST00000530624 HDAC6Q9UBN7 1215 aa16.46■□□□□ 0.23
CTSB-218ENST00000530624 CYP3A4P08684 503 aa16.45■□□□□ 0.22
CTSB-218ENST00000530624 ANKRD1Q15327 319 aa16.45■□□□□ 0.22
CTSB-218ENST00000530624 CEP55Q53EZ4 464 aa16.45■□□□□ 0.22
CTSB-218ENST00000530624 CPLX2Q6PUV4 134 aaKnown RBP16.45■□□□□ 0.22
CTSB-218ENST00000530624 TRIM22Q8IYM9 498 aa16.45■□□□□ 0.22
CTSB-218ENST00000530624 CCDC155Q8N6L0 562 aa16.45■□□□□ 0.22
CTSB-218ENST00000530624 BICD2Q8TD16 824 aa16.45■□□□□ 0.22
CTSB-218ENST00000530624 HERVK_113Q902F9 699 aa16.45■□□□□ 0.22
CTSB-218ENST00000530624 VWCEQ96DN2 955 aa16.45■□□□□ 0.22
CTSB-218ENST00000530624 SLC26A6Q9BXS9 759 aa16.45■□□□□ 0.22
CTSB-218ENST00000530624 NOD1Q9Y239 953 aa16.45■□□□□ 0.22
CTSB-218ENST00000530624 TANC1Q9C0D5 1861 aa16.44■□□□□ 0.22
CTSB-218ENST00000530624 MEIS1O00470 390 aa16.44■□□□□ 0.22
CTSB-218ENST00000530624 SORBS3O60504 671 aa16.44■□□□□ 0.22
CTSB-218ENST00000530624 DEXIO95424 95 aa16.44■□□□□ 0.22
CTSB-218ENST00000530624 CCL23P55773 120 aa16.44■□□□□ 0.22
CTSB-218ENST00000530624 PTK7Q13308 1070 aa16.44■□□□□ 0.22
CTSB-218ENST00000530624 ZNF365Q70YC5 407 aa16.44■□□□□ 0.22
CTSB-218ENST00000530624 REXO1Q8N1G1 1221 aaKnown RBP16.44■□□□□ 0.22
CTSB-218ENST00000530624 AFAP1L1Q8TED9 768 aa16.44■□□□□ 0.22
CTSB-218ENST00000530624 PPP1R13LQ8WUF5 828 aa16.44■□□□□ 0.22
CTSB-218ENST00000530624 ALG1Q9BT22 464 aa16.44■□□□□ 0.22
CTSB-218ENST00000530624 KCNH7Q9NS40 1196 aa16.44■□□□□ 0.22
CTSB-218ENST00000530624 TMEM260Q9NX78 707 aa16.44■□□□□ 0.22
CTSB-218ENST00000530624 ZNF215Q9UL58 517 aaPredicted RBP16.44■□□□□ 0.22
CTSB-218ENST00000530624 NFASCO94856 1347 aa16.44■□□□□ 0.22
CTSB-218ENST00000530624 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.43■□□□□ 0.22
CTSB-218ENST00000530624 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.43■□□□□ 0.22
CTSB-218ENST00000530624 CPLX1O14810 134 aa16.43■□□□□ 0.22
CTSB-218ENST00000530624 PARNO95453 639 aaKnown RBP16.43■□□□□ 0.22
CTSB-218ENST00000530624 FGBP02675 491 aa16.43■□□□□ 0.22
CTSB-218ENST00000530624 IQCF3P0C7M6 154 aa16.43■□□□□ 0.22
CTSB-218ENST00000530624 ARHGAP4P98171 946 aa16.43■□□□□ 0.22
CTSB-218ENST00000530624 SSRP1Q08945 709 aaKnown RBP16.43■□□□□ 0.22
CTSB-218ENST00000530624 RETREG2Q8NC44 543 aa16.43■□□□□ 0.22
CTSB-218ENST00000530624 CYP2W1Q8TAV3 490 aa16.43■□□□□ 0.22
CTSB-218ENST00000530624 SEPT1Q8WYJ6 367 aa16.43■□□□□ 0.22
CTSB-218ENST00000530624 DHX38Q92620 1227 aaKnown RBP16.43■□□□□ 0.22
CTSB-218ENST00000530624 PGBD1Q96JS3 809 aa16.43■□□□□ 0.22
CTSB-218ENST00000530624 MTIF3Q9H2K0 278 aaKnown RBP16.43■□□□□ 0.22
CTSB-218ENST00000530624 TMEM265A0A087WTH1 108 aa16.42■□□□□ 0.22
CTSB-218ENST00000530624 PFKFB2O60825 505 aa16.42■□□□□ 0.22
CTSB-218ENST00000530624 CDKL5O76039 1030 aa16.42■□□□□ 0.22
CTSB-218ENST00000530624 ACRP10323 421 aa16.42■□□□□ 0.22
CTSB-218ENST00000530624 CHMP4BP1P59074 171 aa16.42■□□□□ 0.22
CTSB-218ENST00000530624 JAKMIP3Q5VZ66 844 aa16.42■□□□□ 0.22
CTSB-218ENST00000530624 DEFB123Q8N688 67 aa16.42■□□□□ 0.22
CTSB-218ENST00000530624 SCLYQ96I15 445 aa16.42■□□□□ 0.22
CTSB-218ENST00000530624 LARP6Q9BRS8 491 aaKnown RBP16.42■□□□□ 0.22
CTSB-218ENST00000530624 JPH1Q9HDC5 661 aaPredicted RBP16.42■□□□□ 0.22
CTSB-218ENST00000530624 TPCN1Q9ULQ1 816 aa16.42■□□□□ 0.22
CTSB-218ENST00000530624 EMSYQ7Z589 1322 aa16.42■□□□□ 0.22
CTSB-218ENST00000530624 DOCK5Q9H7D0 1870 aa16.42■□□□□ 0.22
CTSB-218ENST00000530624 IGLV3-22A0A075B6J6 115 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 GSTTP1A0A1W2PQM5 241 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 FAM86B1E9PN63 330 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 ADAMTS3O15072 1205 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 LGR5O75473 907 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 SEC24BO95487 1268 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 FAM86B2P0C5J1 330 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 SMIM10L2AP0DMW4 78 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 SMIM10L2BP0DMW5 78 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 CIITAP33076 1130 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 TCF7P36402 384 aaPredicted RBP16.41■□□□□ 0.22
CTSB-218ENST00000530624 AK2P54819 239 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 SCRN1Q12765 414 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 HIC1Q14526 733 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 TRIM71Q2Q1W2 868 aaKnown RBP16.41■□□□□ 0.22
CTSB-218ENST00000530624 GALNT17Q6IS24 598 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 SERINC5Q86VE9 423 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 SDF4Q9BRK5 362 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 SLKQ9H2G2 1235 aaPredicted RBP16.41■□□□□ 0.22
CTSB-218ENST00000530624 AGO4Q9HCK5 861 aaKnown RBP16.41■□□□□ 0.22
CTSB-218ENST00000530624 VPS54Q9P1Q0 977 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 SLC9A2Q9UBY0 812 aa16.41■□□□□ 0.22
CTSB-218ENST00000530624 TELO2Q9Y4R8 837 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms