RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 SCRN1Q12765 414 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 STK3Q13188 491 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 COL19A1Q14993 1142 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 PKN1Q16512 942 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 ME3Q16798 604 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 UTP14CQ5TAP6 766 aaKnown RBP7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 SDE2Q6IQ49 451 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 SLC30A10Q6XR72 485 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 MORC4Q8TE76 937 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 TBC1D32Q96NH3 1257 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 TAAR1Q96RJ0 339 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 RNF26Q9BY78 433 aaPredicted RBP7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 SLKQ9H2G2 1235 aaPredicted RBP7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 ABHD16BQ9H3Z7 469 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 COL20A1Q9P218 1284 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 EGFL7Q9UHF1 273 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 ZNF236Q9UL36 1845 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 BAZ2BQ9UIF8 2168 aaKnown RBP7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 hCG_2014768A0A024R1R8 64 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 H3BRB1 525 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 hCG_1984214I3L0E3 225 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 PIK3CDO00329 1044 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 MEIS2O14770 477 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 CPLX1O14810 134 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 SEPT4O43236 478 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 EN2P19622 333 aaPredicted RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 EDNRBP24530 442 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 HOXA13P31271 388 aaPredicted RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 SSR1P43307 286 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 ACVR2BQ13705 512 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 SETDB1Q15047 1291 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 RABEP1Q15276 862 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 PFKFB3Q16875 520 aaPredicted RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 CRTC2Q53ET0 693 aaPredicted RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 IFFO2Q5TF58 517 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 CCDC181Q5TID7 509 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 WWC2Q6AWC2 1192 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 TYW1BQ6NUM6 668 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 KRBA2Q6ZNG9 492 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 ARMCX2Q7L311 632 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 ZNF713Q8N859 430 aaPredicted RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 FAM200AQ8TCP9 573 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 NSUN6Q8TEA1 469 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 U2AF1L4Q8WU68 220 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 LRRN4Q8WUT4 740 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 DHX38Q92620 1227 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 PHKBQ93100 1093 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 DEFB118Q96PH6 123 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 IWS1Q96ST2 819 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 IRX2Q9BZI1 471 aaPredicted RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 KATNBL1Q9H079 304 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 TUT1Q9H6E5 874 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 YY1AP1Q9H869 796 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 PSTPIP2Q9H939 334 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 BARHL2Q9NY43 387 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 PRKAG2Q9UGJ0 569 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 LIMCH1Q9UPQ0 1083 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 CNPY2Q9Y2B0 182 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 RPS6KL1Q9Y6S9 549 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 BRCA2P51587 3418 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 B4DLN1 442 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 STXBP3O00186 592 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 ZNF500O60304 480 aaPredicted RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 MSCO60682 206 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 PPFIA3O75145 1194 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 TFRCP02786 760 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 SCG2P13521 617 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 ATP2B1P20020 1258 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 CNGA1P29973 690 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 RGS19P49795 217 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 MRPL12P52815 198 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 SOX10P56693 466 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 IGBP1P78318 339 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 AKAP17AQ02040 695 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 SSRP1Q08945 709 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 RAD51AP2Q09MP3 1159 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 MRPL58Q14197 206 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 CCDC144BQ3MJ40 725 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 EGFLAMQ63HQ2 1017 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 TAPT1Q6NXT6 567 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 CPLX2Q6PUV4 134 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 USP17L6PQ6QN14 398 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 HEATR3Q7Z4Q2 680 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 NECAB1Q8N987 351 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 GPKOWQ92917 476 aaPredicted RBP eCLIP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 ZSCAN31Q96LW9 406 aaPredicted RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 RMDN3Q96TC7 470 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 MPHOSPH6Q99547 160 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 SLC26A6Q9BXS9 759 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 PXMP2Q9NR77 195 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 DDX20Q9UHI6 824 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 OGDHLQ9ULD0 1010 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 FAM184BQ9ULE4 1060 aa7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 DDX49Q9Y6V7 483 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-209ENST00000529214 SMCO2A6NFE2 343 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 CDKL5O76039 1030 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 DEXIO95424 95 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 LARGE1O95461 756 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms