RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 SLC39A14Q15043 492 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 CELF3Q5SZQ8 465 aaKnown RBP12.94□□□□□ -0.34
CAPN1-217ENST00000529133 LRCH2Q5VUJ6 765 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 SLFN12Q8IYM2 578 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 LINC00301Q8NCQ3 95 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 ARMC5Q96C12 935 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 SDF4Q9BRK5 362 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 BCAS3Q9H6U6 928 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 HMX1Q9NP08 348 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-217ENST00000529133 TBC1D22BQ9NU19 505 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 VAV3Q9UKW4 847 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 CFAP45Q9UL16 551 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 GNEQ9Y223 722 aaKnown RBP12.94□□□□□ -0.34
CAPN1-217ENST00000529133 MORC2Q9Y6X9 1032 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-217ENST00000529133 DDX39AO00148 427 aaKnown RBP12.93□□□□□ -0.34
CAPN1-217ENST00000529133 NKRFO15226 690 aaKnown RBP eCLIP12.93□□□□□ -0.34
CAPN1-217ENST00000529133 FARP2O94887 1054 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-217ENST00000529133 CCNE2O96020 404 aa12.93□□□□□ -0.34
CAPN1-217ENST00000529133 GH1P01241 217 aa12.93□□□□□ -0.34
CAPN1-217ENST00000529133 TXKP42681 527 aa12.93□□□□□ -0.34
CAPN1-217ENST00000529133 IL17AQ16552 155 aa12.93□□□□□ -0.34
CAPN1-217ENST00000529133 METTL7BQ6UX53 244 aa12.93□□□□□ -0.34
CAPN1-217ENST00000529133 B3GNT9Q6UX72 402 aa12.93□□□□□ -0.34
CAPN1-217ENST00000529133 CYFIP1Q7L576 1253 aa12.93□□□□□ -0.34
CAPN1-217ENST00000529133 GIMAP8Q8ND71 665 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-217ENST00000529133 LEO1Q8WVC0 666 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-217ENST00000529133 ZNF333Q96JL9 665 aa12.93□□□□□ -0.34
CAPN1-217ENST00000529133 TEKT3Q9BXF9 490 aa12.93□□□□□ -0.34
CAPN1-217ENST00000529133 MCOLN1Q9GZU1 580 aa12.93□□□□□ -0.34
CAPN1-217ENST00000529133 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.93□□□□□ -0.34
CAPN1-217ENST00000529133 UNC93B1Q9H1C4 597 aa12.93□□□□□ -0.34
CAPN1-217ENST00000529133 JPH1Q9HDC5 661 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-217ENST00000529133 DDX20Q9UHI6 824 aaKnown RBP12.93□□□□□ -0.34
CAPN1-217ENST00000529133 FBXO2Q9UK22 296 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-217ENST00000529133 RCOR1Q9UKL0 485 aa12.93□□□□□ -0.34
CAPN1-217ENST00000529133 TELO2Q9Y4R8 837 aa12.93□□□□□ -0.34
CAPN1-217ENST00000529133 KIAA1217Q5T5P2 1943 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 POTEFA5A3E0 1075 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 SPTLC2O15270 562 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 DUSP11O75319 330 aaKnown RBP12.92□□□□□ -0.34
CAPN1-217ENST00000529133 CCL5P13501 91 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 MARCKSP29966 332 aaPredicted RBP12.92□□□□□ -0.34
CAPN1-217ENST00000529133 FXR2P51116 673 aaKnown RBP eCLIP12.92□□□□□ -0.34
CAPN1-217ENST00000529133 KRT76Q01546 638 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 GRIN1Q05586 938 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 SPIRE1Q08AE8 756 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 LAMC2Q13753 1193 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 MTFR1Q15390 333 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 ARL6IP4Q66PJ3 421 aaKnown RBP12.92□□□□□ -0.34
CAPN1-217ENST00000529133 TLK2Q86UE8 772 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 DHX37Q8IY37 1157 aaKnown RBP12.92□□□□□ -0.34
CAPN1-217ENST00000529133 OR6J1Q8NGC5 347 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 KCNG4Q8TDN1 519 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 EMID1Q96A84 441 aaPredicted RBP12.92□□□□□ -0.34
CAPN1-217ENST00000529133 SPATA32Q96LK8 384 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 UNC45AQ9H3U1 944 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 TTC12Q9H892 705 aaPredicted RBP12.92□□□□□ -0.34
CAPN1-217ENST00000529133 MLXIPQ9HAP2 919 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 GDPD2Q9HCC8 539 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 SLC9A2Q9UBY0 812 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 PCDHA12Q9UN75 941 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 Q9Y3F1 56 aa12.92□□□□□ -0.34
CAPN1-217ENST00000529133 ELP1O95163 1332 aa12.91□□□□□ -0.34
CAPN1-217ENST00000529133 VWA3AA6NCI4 1184 aa12.91□□□□□ -0.34
CAPN1-217ENST00000529133 DYNC1LI2O43237 492 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-217ENST00000529133 CHMP2AO43633 222 aa12.91□□□□□ -0.34
CAPN1-217ENST00000529133 PPP6R2O75170 966 aa12.91□□□□□ -0.34
CAPN1-217ENST00000529133 MYCP01106 439 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-217ENST00000529133 RARBP10826 455 aa12.91□□□□□ -0.34
CAPN1-217ENST00000529133 TECP42680 631 aa12.91□□□□□ -0.34
CAPN1-217ENST00000529133 SP4Q02446 784 aa12.91□□□□□ -0.34
CAPN1-217ENST00000529133 PPP2R5CQ13362 524 aa12.91□□□□□ -0.34
CAPN1-217ENST00000529133 TMEM266Q2M3C6 531 aa12.91□□□□□ -0.34
CAPN1-217ENST00000529133 ZNF746Q6NUN9 644 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-217ENST00000529133 DTHD1Q6ZMT9 781 aa12.91□□□□□ -0.34
CAPN1-217ENST00000529133 FERMT2Q96AC1 680 aa12.91□□□□□ -0.34
CAPN1-217ENST00000529133 SCAND2PQ9GZW5 306 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-217ENST00000529133 AP5M1Q9H0R1 490 aa12.91□□□□□ -0.34
CAPN1-217ENST00000529133 UPF3AQ9H1J1 476 aaKnown RBP12.91□□□□□ -0.34
CAPN1-217ENST00000529133 PAK6Q9NQU5 681 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-217ENST00000529133 TCEAL9Q9UHQ7 104 aa12.91□□□□□ -0.34
CAPN1-217ENST00000529133 SRPRBQ9Y5M8 271 aaKnown RBP12.91□□□□□ -0.34
CAPN1-217ENST00000529133 SYNRGQ9UMZ2 1314 aa12.9□□□□□ -0.34
CAPN1-217ENST00000529133 POTEMA6NI47 508 aa12.9□□□□□ -0.34
CAPN1-217ENST00000529133 EML1O00423 815 aa12.9□□□□□ -0.34
CAPN1-217ENST00000529133 CTAGE5O15320 804 aa12.9□□□□□ -0.34
CAPN1-217ENST00000529133 MSCO60682 206 aa12.9□□□□□ -0.34
CAPN1-217ENST00000529133 ADAMTS4O75173 837 aa12.9□□□□□ -0.34
CAPN1-217ENST00000529133 ACTR2P61160 394 aa12.9□□□□□ -0.34
CAPN1-217ENST00000529133 IRX5P78411 483 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-217ENST00000529133 HSDL1Q3SXM5 330 aa12.9□□□□□ -0.34
CAPN1-217ENST00000529133 LHX8Q68G74 356 aa12.9□□□□□ -0.34
CAPN1-217ENST00000529133 NCAPH2Q6IBW4 605 aa12.9□□□□□ -0.34
CAPN1-217ENST00000529133 CLEC17AQ6ZS10 378 aa12.9□□□□□ -0.34
CAPN1-217ENST00000529133 IGSF22Q8N9C0 903 aa12.9□□□□□ -0.34
CAPN1-217ENST00000529133 KRI1Q8N9T8 703 aaKnown RBP12.9□□□□□ -0.34
CAPN1-217ENST00000529133 PPTC7Q8NI37 304 aa12.9□□□□□ -0.34
CAPN1-217ENST00000529133 AFG1LQ8WV93 481 aa12.9□□□□□ -0.34
CAPN1-217ENST00000529133 SPATA33Q96N06 139 aa12.9□□□□□ -0.34
CAPN1-217ENST00000529133 CLIC6Q96NY7 704 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms