RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 ADCY7P51828 1080 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 MDM2Q00987 491 aaPredicted RBP10.54□□□□□ -0.72
LINC00958-203ENST00000527945 SP2Q02086 613 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 LY6KQ17RY6 165 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 MYSM1Q5VVJ2 828 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 SH3RF1Q7Z6J0 888 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 CCDC83Q8IWF9 413 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 TRIM22Q8IYM9 498 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 CCDC148Q8NFR7 591 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 C6orf50Q9HD87 102 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 MTMR10Q9NXD2 777 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 PCDHA6Q9UN73 950 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 LIMCH1Q9UPQ0 1083 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 PCDHA8Q9Y5H6 950 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 CPLX1O14810 134 aa10.53□□□□□ -0.72
LINC00958-203ENST00000527945 DEXIO95424 95 aa10.53□□□□□ -0.72
LINC00958-203ENST00000527945 MMP3P08254 477 aa10.53□□□□□ -0.72
LINC00958-203ENST00000527945 ITGB5P18084 799 aa10.53□□□□□ -0.72
LINC00958-203ENST00000527945 SMAD3P84022 425 aaKnown RBP10.53□□□□□ -0.72
LINC00958-203ENST00000527945 SSRP1Q08945 709 aaKnown RBP10.53□□□□□ -0.72
LINC00958-203ENST00000527945 EARS2Q5JPH6 523 aaKnown RBP10.53□□□□□ -0.72
LINC00958-203ENST00000527945 GALNT17Q6IS24 598 aa10.53□□□□□ -0.72
LINC00958-203ENST00000527945 MFSD5Q6N075 450 aa10.53□□□□□ -0.72
LINC00958-203ENST00000527945 METTL7BQ6UX53 244 aa10.53□□□□□ -0.72
LINC00958-203ENST00000527945 NIPA1Q7RTP0 329 aa10.53□□□□□ -0.72
LINC00958-203ENST00000527945 CYP2W1Q8TAV3 490 aa10.53□□□□□ -0.72
LINC00958-203ENST00000527945 OXER1Q8TDS5 423 aa10.53□□□□□ -0.72
LINC00958-203ENST00000527945 AFG1LQ8WV93 481 aa10.53□□□□□ -0.72
LINC00958-203ENST00000527945 ANO3Q9BYT9 981 aa10.53□□□□□ -0.72
LINC00958-203ENST00000527945 PRDM5Q9NQX1 630 aaPredicted RBP10.53□□□□□ -0.72
LINC00958-203ENST00000527945 KCNJ14Q9UNX9 436 aa10.53□□□□□ -0.72
LINC00958-203ENST00000527945 GRIN2DO15399 1336 aa10.53□□□□□ -0.72
LINC00958-203ENST00000527945 TRIP12Q14669 1992 aaPredicted RBP10.52□□□□□ -0.72
LINC00958-203ENST00000527945 TMEM265A0A087WTH1 108 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 FAM205CA6NFA0 338 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 SORBS3O60504 671 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 PARNO95453 639 aaKnown RBP10.52□□□□□ -0.73
LINC00958-203ENST00000527945 GGPS1O95749 300 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 F2P00734 622 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 MYL3P08590 195 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 CYP3A4P08684 503 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 UBA1P22314 1058 aaKnown RBP10.52□□□□□ -0.73
LINC00958-203ENST00000527945 PPIGQ13427 754 aaKnown RBP eCLIP10.52□□□□□ -0.73
LINC00958-203ENST00000527945 RASIP1Q5U651 963 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 JAKMIP3Q5VZ66 844 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 TMEM199Q8N511 208 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 BADQ92934 168 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 TNFRSF25Q93038 417 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 TMX3Q96JJ7 454 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 SPATA33Q96N06 139 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 PHF20Q9BVI0 1012 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 MLXIPQ9HAP2 919 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 RTEL1Q9NZ71 1219 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 ORC3Q9UBD5 711 aaPredicted RBP10.52□□□□□ -0.73
LINC00958-203ENST00000527945 STXBP5LQ9Y2K9 1186 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 UBIAD1Q9Y5Z9 338 aa10.52□□□□□ -0.73
LINC00958-203ENST00000527945 HAS3O00219 553 aa10.51□□□□□ -0.73
LINC00958-203ENST00000527945 PITPNM1O00562 1244 aa10.51□□□□□ -0.73
LINC00958-203ENST00000527945 WNT7AO00755 349 aa10.51□□□□□ -0.73
LINC00958-203ENST00000527945 ATP9AO75110 1047 aa10.51□□□□□ -0.73
LINC00958-203ENST00000527945 SREBF1P36956 1147 aa10.51□□□□□ -0.73
LINC00958-203ENST00000527945 FOSBP53539 338 aa10.51□□□□□ -0.73
LINC00958-203ENST00000527945 FPGSQ05932 587 aa10.51□□□□□ -0.73
LINC00958-203ENST00000527945 SHHQ15465 462 aa10.51□□□□□ -0.73
LINC00958-203ENST00000527945 NBPF20Q3BBV1 942 aa10.51□□□□□ -0.73
LINC00958-203ENST00000527945 REXO1Q8N1G1 1221 aaKnown RBP10.51□□□□□ -0.73
LINC00958-203ENST00000527945 DEFB123Q8N688 67 aa10.51□□□□□ -0.73
LINC00958-203ENST00000527945 DAGLBQ8NCG7 672 aa10.51□□□□□ -0.73
LINC00958-203ENST00000527945 PPP1R13LQ8WUF5 828 aa10.51□□□□□ -0.73
LINC00958-203ENST00000527945 JADE2Q9NQC1 790 aa10.51□□□□□ -0.73
LINC00958-203ENST00000527945 IGLV3-22A0A075B6J6 115 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 FAM86B1E9PN63 330 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 MEIS1O00470 390 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 NOP56O00567 594 aaKnown RBP10.5□□□□□ -0.73
LINC00958-203ENST00000527945 B4GALT4O60513 344 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 PFKMP08237 780 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 FAM86B2P0C5J1 330 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 KCNA2P16389 499 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 XBP1P17861 261 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 RFC2P35250 354 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 RBL2Q08999 1139 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 MTMR1Q13613 665 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 HSDL1Q3SXM5 330 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 CEP55Q53EZ4 464 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 C9orf50Q5SZB4 431 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 RPUSD2Q8IZ73 545 aaKnown RBP10.5□□□□□ -0.73
LINC00958-203ENST00000527945 CCDC155Q8N6L0 562 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 CAGE1Q8TC20 777 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 WASF1Q92558 559 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 KAT2BQ92831 832 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 TNPO1Q92973 898 aaKnown RBP10.5□□□□□ -0.73
LINC00958-203ENST00000527945 LENG9Q96B70 501 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 MXRA8Q9BRK3 442 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 ALG1Q9BT22 464 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 NOC4LQ9BVI4 516 aaKnown RBP10.5□□□□□ -0.73
LINC00958-203ENST00000527945 HIPK3Q9H422 1215 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 UPF2Q9HAU5 1272 aaKnown RBP10.5□□□□□ -0.73
LINC00958-203ENST00000527945 ZNF215Q9UL58 517 aaPredicted RBP10.5□□□□□ -0.73
LINC00958-203ENST00000527945 PCDHA4Q9UN74 947 aa10.5□□□□□ -0.73
LINC00958-203ENST00000527945 NFASCO94856 1347 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms