RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 MARCKSP29966 332 aaPredicted RBP15.51■□□□□ 0.07
CD44-224ENST00000526669 TXKP42681 527 aa15.51■□□□□ 0.07
CD44-224ENST00000526669 STK38Q15208 465 aa15.51■□□□□ 0.07
CD44-224ENST00000526669 LRCH2Q5VUJ6 765 aa15.51■□□□□ 0.07
CD44-224ENST00000526669 C4orf32Q8N8J7 132 aa15.51■□□□□ 0.07
CD44-224ENST00000526669 SLC5A5Q92911 643 aa15.51■□□□□ 0.07
CD44-224ENST00000526669 TNPO1Q92973 898 aaKnown RBP15.51■□□□□ 0.07
CD44-224ENST00000526669 DYNC1LI2O43237 492 aaPredicted RBP15.5■□□□□ 0.07
CD44-224ENST00000526669 GAS7O60861 476 aa15.5■□□□□ 0.07
CD44-224ENST00000526669 GH1P01241 217 aa15.5■□□□□ 0.07
CD44-224ENST00000526669 KRT85P78386 507 aa15.5■□□□□ 0.07
CD44-224ENST00000526669 ATP2C1P98194 919 aaPredicted RBP15.5■□□□□ 0.07
CD44-224ENST00000526669 ARHGAP1Q07960 439 aa15.5■□□□□ 0.07
CD44-224ENST00000526669 ORC2Q13416 577 aaPredicted RBP15.5■□□□□ 0.07
CD44-224ENST00000526669 PTPAQ15257 358 aa15.5■□□□□ 0.07
CD44-224ENST00000526669 DUSP28Q4G0W2 176 aa15.5■□□□□ 0.07
CD44-224ENST00000526669 CELF3Q5SZQ8 465 aaKnown RBP15.5■□□□□ 0.07
CD44-224ENST00000526669 KCNV1Q6PIU1 500 aa15.5■□□□□ 0.07
CD44-224ENST00000526669 TLK2Q86UE8 772 aa15.5■□□□□ 0.07
CD44-224ENST00000526669 DHX37Q8IY37 1157 aaKnown RBP15.5■□□□□ 0.07
CD44-224ENST00000526669 ZNF333Q96JL9 665 aa15.5■□□□□ 0.07
CD44-224ENST00000526669 MTMR9Q96QG7 549 aa15.5■□□□□ 0.07
CD44-224ENST00000526669 SDF4Q9BRK5 362 aa15.5■□□□□ 0.07
CD44-224ENST00000526669 TEKT3Q9BXF9 490 aa15.5■□□□□ 0.07
CD44-224ENST00000526669 MLXIPQ9HAP2 919 aa15.5■□□□□ 0.07
CD44-224ENST00000526669 GDPD2Q9HCC8 539 aa15.5■□□□□ 0.07
CD44-224ENST00000526669 CEP131Q9UPN4 1083 aa15.5■□□□□ 0.07
CD44-224ENST00000526669 GNEQ9Y223 722 aaKnown RBP15.5■□□□□ 0.07
CD44-224ENST00000526669 ATP6V1DQ9Y5K8 247 aa15.5■□□□□ 0.07
CD44-224ENST00000526669 SCN10AQ9Y5Y9 1956 aa15.49■□□□□ 0.07
CD44-224ENST00000526669 NFASCO94856 1347 aa15.49■□□□□ 0.07
CD44-224ENST00000526669 MAFGO15525 162 aa15.49■□□□□ 0.07
CD44-224ENST00000526669 DHX15O43143 795 aaKnown RBP15.49■□□□□ 0.07
CD44-224ENST00000526669 PSMD10O75832 226 aa15.49■□□□□ 0.07
CD44-224ENST00000526669 FARP2O94887 1054 aaPredicted RBP15.49■□□□□ 0.07
CD44-224ENST00000526669 MYCNP04198 464 aaPredicted RBP15.49■□□□□ 0.07
CD44-224ENST00000526669 TGFB3P10600 412 aa15.49■□□□□ 0.07
CD44-224ENST00000526669 RARBP10826 455 aa15.49■□□□□ 0.07
CD44-224ENST00000526669 NASPP49321 788 aaPredicted RBP15.49■□□□□ 0.07
CD44-224ENST00000526669 NEDD9Q14511 834 aa15.49■□□□□ 0.07
CD44-224ENST00000526669 TPRNQ4KMQ1 711 aa15.49■□□□□ 0.07
CD44-224ENST00000526669 NCAPH2Q6IBW4 605 aa15.49■□□□□ 0.07
CD44-224ENST00000526669 ARMC5Q96C12 935 aa15.49■□□□□ 0.07
CD44-224ENST00000526669 RNF208Q9H0X6 261 aa15.49■□□□□ 0.07
CD44-224ENST00000526669 UNC45AQ9H3U1 944 aa15.49■□□□□ 0.07
CD44-224ENST00000526669 POLR3EQ9NVU0 708 aa15.49■□□□□ 0.07
CD44-224ENST00000526669 SLC9A2Q9UBY0 812 aa15.49■□□□□ 0.07
CD44-224ENST00000526669 DDX20Q9UHI6 824 aaKnown RBP15.49■□□□□ 0.07
CD44-224ENST00000526669 SYNRGQ9UMZ2 1314 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 POTEFA5A3E0 1075 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 MYADML2A6NDP7 307 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 POTEMA6NI47 508 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 TBX3O15119 743 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 NKRFO15226 690 aaKnown RBP eCLIP15.48■□□□□ 0.07
CD44-224ENST00000526669 PGK1P00558 417 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 TECP42680 631 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 BEX3Q00994 111 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 GRIN1Q05586 938 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 IL17AQ16552 155 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 SLFN12Q8IYM2 578 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 LINC00301Q8NCQ3 95 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 AFG1LQ8WV93 481 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 FAM20AQ96MK3 541 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 SPATA33Q96N06 139 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 DEFB118Q96PH6 123 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 SENP7Q9BQF6 1050 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 AP5M1Q9H0R1 490 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 TTC12Q9H892 705 aaPredicted RBP15.48■□□□□ 0.07
CD44-224ENST00000526669 JPH1Q9HDC5 661 aaPredicted RBP15.48■□□□□ 0.07
CD44-224ENST00000526669 TBC1D22BQ9NU19 505 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 TCEAL9Q9UHQ7 104 aa15.48■□□□□ 0.07
CD44-224ENST00000526669 VWA3AA6NCI4 1184 aa15.47■□□□□ 0.07
CD44-224ENST00000526669 SPTLC2O15270 562 aa15.47■□□□□ 0.07
CD44-224ENST00000526669 DUSP11O75319 330 aaKnown RBP15.47■□□□□ 0.07
CD44-224ENST00000526669 YEATS4O95619 227 aa15.47■□□□□ 0.07
CD44-224ENST00000526669 BMP15O95972 392 aa15.47■□□□□ 0.07
CD44-224ENST00000526669 CCNE2O96020 404 aa15.47■□□□□ 0.07
CD44-224ENST00000526669 C6orf222P0C671 652 aaPredicted RBP15.47■□□□□ 0.07
CD44-224ENST00000526669 SLC39A14Q15043 492 aa15.47■□□□□ 0.07
CD44-224ENST00000526669 HSDL1Q3SXM5 330 aa15.47■□□□□ 0.07
CD44-224ENST00000526669 COL13A1Q5TAT6 717 aaPredicted RBP15.47■□□□□ 0.07
CD44-224ENST00000526669 METTL7BQ6UX53 244 aa15.47■□□□□ 0.07
CD44-224ENST00000526669 GIMAP8Q8ND71 665 aaPredicted RBP15.47■□□□□ 0.07
CD44-224ENST00000526669 SPATA32Q96LK8 384 aa15.47■□□□□ 0.07
CD44-224ENST00000526669 CLIC6Q96NY7 704 aa15.47■□□□□ 0.07
CD44-224ENST00000526669 RIT2Q99578 217 aa15.47■□□□□ 0.07
CD44-224ENST00000526669 XPNPEP3Q9NQH7 507 aa15.47■□□□□ 0.07
CD44-224ENST00000526669 VAV3Q9UKW4 847 aa15.47■□□□□ 0.07
CD44-224ENST00000526669 CFAP45Q9UL16 551 aa15.47■□□□□ 0.07
CD44-224ENST00000526669 PCDHA12Q9UN75 941 aa15.47■□□□□ 0.07
CD44-224ENST00000526669 EML1O00423 815 aa15.46■□□□□ 0.07
CD44-224ENST00000526669 LAD1O00515 517 aa15.46■□□□□ 0.07
CD44-224ENST00000526669 NOP56O00567 594 aaKnown RBP15.46■□□□□ 0.07
CD44-224ENST00000526669 ACTR2P61160 394 aa15.46■□□□□ 0.07
CD44-224ENST00000526669 LAMC2Q13753 1193 aa15.46■□□□□ 0.07
CD44-224ENST00000526669 TMEM266Q2M3C6 531 aa15.46■□□□□ 0.07
CD44-224ENST00000526669 UTP14CQ5TAP6 766 aaKnown RBP15.46■□□□□ 0.07
CD44-224ENST00000526669 LHX8Q68G74 356 aa15.46■□□□□ 0.07
CD44-224ENST00000526669 ATL3Q6DD88 541 aa15.46■□□□□ 0.07
CD44-224ENST00000526669 DTHD1Q6ZMT9 781 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms