RNA–Protein interactions for RNA: ENST00000526369.3

PPFIA1-208, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-208ENST00000526369 SPATC1LQ9H0A9 340 aa11.74□□□□□ -0.53
PPFIA1-208ENST00000526369 SEMA6BQ9H3T3 888 aa11.74□□□□□ -0.53
PPFIA1-208ENST00000526369 FBXO28Q9NVF7 368 aa11.74□□□□□ -0.53
PPFIA1-208ENST00000526369 HOXC10Q9NYD6 342 aa11.74□□□□□ -0.53
PPFIA1-208ENST00000526369 CCDC39Q9UFE4 941 aa11.74□□□□□ -0.53
PPFIA1-208ENST00000526369 DDX25Q9UHL0 483 aaKnown RBP11.74□□□□□ -0.53
PPFIA1-208ENST00000526369 DNAH12Q6ZR08 3092 aa11.73□□□□□ -0.53
PPFIA1-208ENST00000526369 A0A0G2JMZ2 1700 aa11.73□□□□□ -0.53
PPFIA1-208ENST00000526369 WNT7AO00755 349 aa11.73□□□□□ -0.53
PPFIA1-208ENST00000526369 CFBP00751 764 aa11.73□□□□□ -0.53
PPFIA1-208ENST00000526369 SREBF1P36956 1147 aa11.73□□□□□ -0.53
PPFIA1-208ENST00000526369 ARHGAP4P98171 946 aa11.73□□□□□ -0.53
PPFIA1-208ENST00000526369 OLFML2BQ68BL8 750 aa11.73□□□□□ -0.53
PPFIA1-208ENST00000526369 USP17L6PQ6QN14 398 aa11.73□□□□□ -0.53
PPFIA1-208ENST00000526369 KRBA2Q6ZNG9 492 aa11.73□□□□□ -0.53
PPFIA1-208ENST00000526369 POTEDQ86YR6 584 aa11.73□□□□□ -0.53
PPFIA1-208ENST00000526369 SAMD3Q8N6K7 520 aa11.73□□□□□ -0.53
PPFIA1-208ENST00000526369 MAFAQ8NHW3 353 aaPredicted RBP11.73□□□□□ -0.53
PPFIA1-208ENST00000526369 MYLIPQ8WY64 445 aa11.73□□□□□ -0.53
PPFIA1-208ENST00000526369 NAT10Q9H0A0 1025 aaKnown RBP11.73□□□□□ -0.53
PPFIA1-208ENST00000526369 SLC38A10Q9HBR0 1119 aa11.73□□□□□ -0.53
PPFIA1-208ENST00000526369 MYH7BA7E2Y1 1941 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 LAMA2P24043 3122 aaKnown RBP11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 TRIM43BA6NCK2 446 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 MEIS2O14770 477 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 ADAMTS3O15072 1205 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 POLR2DO15514 142 aaKnown RBP11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 SEPT4O43236 478 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 STRNO43815 780 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 TDP2O95551 362 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 ALAS1P13196 640 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 ZNF76P36508 570 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 UBA7P41226 1012 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 USP11P51784 963 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 SETQ01105 290 aaPredicted RBP11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 LRRC41Q15345 812 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 SPECC1Q5M775 1068 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 ELOA2Q8IYF1 753 aaPredicted RBP11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 SLFN12Q8IYM2 578 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 IQUBQ8NA54 791 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 TRIM43Q96BQ3 446 aaPredicted RBP11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 DHX58Q96C10 678 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 ATG4CQ96DT6 458 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 CDK5RAP3Q96JB5 506 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 MAGEF1Q9HAY2 307 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 PDLIM7Q9NR12 457 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 ANO10Q9NW15 660 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 SLC5A4Q9NY91 659 aa11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 MAP3K20Q9NYL2 800 aaKnown RBP11.72□□□□□ -0.53
PPFIA1-208ENST00000526369 KDM3AQ9Y4C1 1321 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 VWA5AO00534 786 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 SMC2O95347 1197 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 IGHA2P01877 340 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 PGK2P07205 417 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 HOXA13P31271 388 aaPredicted RBP11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 DSG3P32926 999 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 STAT6P42226 847 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 TLE2Q04725 743 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 GRIN1Q05586 938 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 POSTNQ15063 836 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 TKFCQ3LXA3 575 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 FCHSD1Q86WN1 690 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 CPXCR1Q8N123 301 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 PDILTQ8N807 584 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 FAM200AQ8TCP9 573 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 CALML4Q96GE6 196 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 MROH8Q9H579 483 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 RAVER2Q9HCJ3 691 aaKnown RBP11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 HOMER2Q9NSB8 354 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 STK24Q9Y6E0 443 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 MRVI1Q9Y6F6 885 aa11.71□□□□□ -0.53
PPFIA1-208ENST00000526369 PQBP1O60828 265 aaKnown RBP11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 PGK1P00558 417 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 FCER1AP12319 257 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 FOSL2P15408 326 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 FXR2P51116 673 aaKnown RBP eCLIP11.7□□□□□ -0.542e-6■■■□□ 16.5
PPFIA1-208ENST00000526369 TPM4P67936 248 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 HAUS3Q68CZ6 603 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 SNRNP48Q6IEG0 339 aaKnown RBP11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 GAS2L3Q86XJ1 694 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 MB21D1Q8N884 522 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 RNF214Q8ND24 703 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 SHCBP1Q8NEM2 672 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 ERMNQ8TAM6 284 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 MAML3Q96JK9 1138 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 FUCA2Q9BTY2 467 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 TEX13BQ9BXU2 312 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 TMEM60Q9H2L4 133 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 TTYH1Q9H313 450 aaPredicted RBP11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 CUEDC2Q9H467 287 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 XPNPEP3Q9NQH7 507 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 DISC1Q9NRI5 854 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 RNF146Q9NTX7 359 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 DACH1Q9UI36 760 aa11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 COL11A1P12107 1806 aaPredicted RBP11.7□□□□□ -0.54
PPFIA1-208ENST00000526369 ZNF536O15090 1300 aa11.69□□□□□ -0.54
PPFIA1-208ENST00000526369 TBX3O15119 743 aa11.69□□□□□ -0.54
PPFIA1-208ENST00000526369 SLC26A4O43511 780 aa11.69□□□□□ -0.54
PPFIA1-208ENST00000526369 SLC37A4O43826 429 aa11.69□□□□□ -0.54
PPFIA1-208ENST00000526369 SLFN14P0C7P3 912 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms