RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 ECHS1P30084 290 aa8.79□□□□□ -1
BDNF-213ENST00000525950 ATP1A2P50993 1020 aa8.79□□□□□ -1
BDNF-213ENST00000525950 USP11P51784 963 aa8.79□□□□□ -1
BDNF-213ENST00000525950 GUCY1A3Q02108 690 aa8.79□□□□□ -1
BDNF-213ENST00000525950 SKIDA1Q1XH10 827 aa8.79□□□□□ -1
BDNF-213ENST00000525950 LACTB2Q53H82 288 aaPredicted RBP8.79□□□□□ -1
BDNF-213ENST00000525950 TRIM59Q8IWR1 403 aa8.79□□□□□ -1
BDNF-213ENST00000525950 IFT81Q8WYA0 676 aa8.79□□□□□ -1
BDNF-213ENST00000525950 EEF2KMTQ96G04 330 aa8.79□□□□□ -1
BDNF-213ENST00000525950 PLAAQ9Y263 795 aa8.79□□□□□ -1
BDNF-213ENST00000525950 ROBO1Q9Y6N7 1651 aa8.79□□□□□ -1
BDNF-213ENST00000525950 WNK3Q9BYP7 1800 aa8.79□□□□□ -1
BDNF-213ENST00000525950 GCOM1H8Y6P7 765 aaPredicted RBP8.79□□□□□ -1
BDNF-213ENST00000525950 RAD51CO43502 376 aa8.79□□□□□ -1
BDNF-213ENST00000525950 MYZAPP0CAP1 466 aa8.79□□□□□ -1
BDNF-213ENST00000525950 ZBTB48P10074 688 aaPredicted RBP8.79□□□□□ -1
BDNF-213ENST00000525950 MAP2K2P36507 400 aa8.79□□□□□ -1
BDNF-213ENST00000525950 TDRD12Q587J7 1177 aaKnown RBP8.79□□□□□ -1
BDNF-213ENST00000525950 SOGA3Q5TF21 947 aa8.79□□□□□ -1
BDNF-213ENST00000525950 KCTD16Q68DU8 428 aa8.79□□□□□ -1
BDNF-213ENST00000525950 TTC19Q6DKK2 380 aaPredicted RBP8.79□□□□□ -1
BDNF-213ENST00000525950 PPP4R3CPQ6ZMV5 832 aa8.79□□□□□ -1
BDNF-213ENST00000525950 ZNF444Q8N0Y2 327 aaPredicted RBP8.79□□□□□ -1
BDNF-213ENST00000525950 TBCKQ8TEA7 893 aa8.79□□□□□ -1
BDNF-213ENST00000525950 TAF4BQ92750 862 aa8.79□□□□□ -1
BDNF-213ENST00000525950 GMNCA6NCL1 334 aa8.78□□□□□ -1
BDNF-213ENST00000525950 H0YHG0 523 aa8.78□□□□□ -1
BDNF-213ENST00000525950 TRAPPC3O43617 180 aa8.78□□□□□ -1
BDNF-213ENST00000525950 USP17L8P0C7I0 530 aa8.78□□□□□ -1
BDNF-213ENST00000525950 TSPY3P0CV98 308 aa8.78□□□□□ -1
BDNF-213ENST00000525950 TSPY8P0CW00 308 aa8.78□□□□□ -1
BDNF-213ENST00000525950 ATP6V1AP38606 617 aa8.78□□□□□ -1
BDNF-213ENST00000525950 RPS6KA1Q15418 735 aa8.78□□□□□ -1
BDNF-213ENST00000525950 CALCRLQ16602 461 aa8.78□□□□□ -1
BDNF-213ENST00000525950 RASGEF1CQ8N431 466 aa8.78□□□□□ -1
BDNF-213ENST00000525950 DNAJC19Q96DA6 116 aa8.78□□□□□ -1
BDNF-213ENST00000525950 PSMB7Q99436 277 aa8.78□□□□□ -1
BDNF-213ENST00000525950 HINFPQ9BQA5 517 aa8.78□□□□□ -1
BDNF-213ENST00000525950 MKNK2Q9HBH9 465 aa8.78□□□□□ -1
BDNF-213ENST00000525950 COL14A1Q05707 1796 aaKnown RBP8.78□□□□□ -1
BDNF-213ENST00000525950 IRS2Q9Y4H2 1338 aa8.78□□□□□ -1
BDNF-213ENST00000525950 ZNF831Q5JPB2 1677 aa8.78□□□□□ -1
BDNF-213ENST00000525950 A0A0A6YYK5 440 aaPredicted RBP8.78□□□□□ -1
BDNF-213ENST00000525950 HSD17B3P37058 310 aa8.78□□□□□ -1
BDNF-213ENST00000525950 WLSQ5T9L3 541 aa8.78□□□□□ -1
BDNF-213ENST00000525950 ANKRD13CQ8N6S4 541 aa8.78□□□□□ -1
BDNF-213ENST00000525950 DDX12PQ92771 950 aa8.78□□□□□ -1
BDNF-213ENST00000525950 HPS3Q969F9 1004 aa8.78□□□□□ -1
BDNF-213ENST00000525950 CENPTQ96BT3 561 aa8.78□□□□□ -1
BDNF-213ENST00000525950 CDK5RAP3Q96JB5 506 aa8.78□□□□□ -1
BDNF-213ENST00000525950 SLITRK6Q9H5Y7 841 aa8.78□□□□□ -1
BDNF-213ENST00000525950 RIOX1Q9H6W3 641 aa8.78□□□□□ -1
BDNF-213ENST00000525950 KLC4Q9NSK0 619 aa8.78□□□□□ -1
BDNF-213ENST00000525950 INTUQ9ULD6 942 aa8.78□□□□□ -1
BDNF-213ENST00000525950 TNRC6CQ9HCJ0 1690 aaKnown RBP8.78□□□□□ -1
BDNF-213ENST00000525950 DOT1LQ8TEK3 1739 aa8.78□□□□□ -1
BDNF-213ENST00000525950 GOLGA6L7A0A1B0GV03 622 aa8.78□□□□□ -1
BDNF-213ENST00000525950 KIF4AO95239 1232 aa8.78□□□□□ -1
BDNF-213ENST00000525950 GHRP10912 638 aa8.78□□□□□ -1
BDNF-213ENST00000525950 PRDX5P30044 214 aa8.78□□□□□ -1
BDNF-213ENST00000525950 NPEPPSP55786 919 aa8.78□□□□□ -1
BDNF-213ENST00000525950 GSTO1P78417 241 aa8.78□□□□□ -1
BDNF-213ENST00000525950 MRPS25P82663 173 aaKnown RBP8.78□□□□□ -1
BDNF-213ENST00000525950 CCDC40Q4G0X9 1142 aa8.78□□□□□ -1
BDNF-213ENST00000525950 CEP85LQ5SZL2 805 aa8.78□□□□□ -1
BDNF-213ENST00000525950 KRT79Q5XKE5 535 aa8.78□□□□□ -1
BDNF-213ENST00000525950 REXO1Q8N1G1 1221 aaKnown RBP8.78□□□□□ -1
BDNF-213ENST00000525950 NEDD1Q8NHV4 660 aa8.78□□□□□ -1
BDNF-213ENST00000525950 TBC1D5Q92609 795 aa8.78□□□□□ -1
BDNF-213ENST00000525950 CYFIP2Q96F07 1278 aa8.78□□□□□ -1
BDNF-213ENST00000525950 GANQ9H2C0 597 aa8.78□□□□□ -1
BDNF-213ENST00000525950 FBXL5Q9UKA1 691 aa8.78□□□□□ -1
BDNF-213ENST00000525950 TTC7AQ9ULT0 858 aaPredicted RBP8.78□□□□□ -1
BDNF-213ENST00000525950 NENFQ9UMX5 172 aa8.78□□□□□ -1
BDNF-213ENST00000525950 KIF13BQ9NQT8 1826 aa8.77□□□□□ -1
BDNF-213ENST00000525950 MYO1FO00160 1098 aa8.77□□□□□ -1
BDNF-213ENST00000525950 PRKCIP41743 596 aa8.77□□□□□ -1
BDNF-213ENST00000525950 MMP14P50281 582 aa8.77□□□□□ -1
BDNF-213ENST00000525950 ERVK-9P63128 1117 aa8.77□□□□□ -1
BDNF-213ENST00000525950 HDLBPQ00341 1268 aaKnown RBP8.77□□□□□ -1
BDNF-213ENST00000525950 KIAA0753Q2KHM9 967 aa8.77□□□□□ -1
BDNF-213ENST00000525950 EDRF1Q3B7T1 1238 aa8.77□□□□□ -1
BDNF-213ENST00000525950 PREPLQ4J6C6 727 aaPredicted RBP8.77□□□□□ -1
BDNF-213ENST00000525950 PPP1R18Q6NYC8 613 aa8.77□□□□□ -1
BDNF-213ENST00000525950 SLFN11Q7Z7L1 901 aa8.77□□□□□ -1
BDNF-213ENST00000525950 CCDC13Q8IYE1 715 aa8.77□□□□□ -1
BDNF-213ENST00000525950 LRRC57Q8N9N7 239 aa8.77□□□□□ -1
BDNF-213ENST00000525950 CDCA7Q9BWT1 371 aaPredicted RBP8.77□□□□□ -1
BDNF-213ENST00000525950 LSM14BQ9BX40 385 aaKnown RBP8.77□□□□□ -1
BDNF-213ENST00000525950 CXorf56Q9H5V9 222 aa8.77□□□□□ -1
BDNF-213ENST00000525950 SLAIN2Q9P270 581 aa8.77□□□□□ -1
BDNF-213ENST00000525950 MYH14Q7Z406 1995 aaKnown RBP8.77□□□□□ -1.01
BDNF-213ENST00000525950 ZSCAN5CA6NGD5 496 aaPredicted RBP8.77□□□□□ -1.01
BDNF-213ENST00000525950 CCDC172P0C7W6 258 aa8.77□□□□□ -1.01
BDNF-213ENST00000525950 RASA1P20936 1047 aa8.77□□□□□ -1.01
BDNF-213ENST00000525950 KLHL30Q0D2K2 578 aa8.77□□□□□ -1.01
BDNF-213ENST00000525950 ASIC2Q16515 512 aa8.77□□□□□ -1.01
BDNF-213ENST00000525950 LMBR1Q8WVP7 490 aa8.77□□□□□ -1.01
BDNF-213ENST00000525950 CNOT10Q9H9A5 744 aaKnown RBP8.77□□□□□ -1.01
BDNF-213ENST00000525950 SEC63Q9UGP8 760 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms