RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 LRRC37A2A6NM11 1700 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 ZNF536O15090 1300 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 RPTORQ8N122 1335 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 FARP2O94887 1054 aaPredicted RBP8.02□□□□□ -1.13
VPS11-201ENST00000524454 SLC25A27O95847 323 aa8.02□□□□□ -1.13
VPS11-201ENST00000524454 XRCC5P13010 732 aaKnown RBP8.02□□□□□ -1.13
VPS11-201ENST00000524454 PRPHP41219 470 aa8.02□□□□□ -1.13
VPS11-201ENST00000524454 TOB1P50616 345 aaPredicted RBP8.02□□□□□ -1.13
VPS11-201ENST00000524454 NLRP5P59047 1200 aa8.02□□□□□ -1.13
VPS11-201ENST00000524454 ATP2C1P98194 919 aaPredicted RBP8.02□□□□□ -1.13
VPS11-201ENST00000524454 ZNF543Q08ER8 600 aa8.02□□□□□ -1.13
VPS11-201ENST00000524454 HIC1Q14526 733 aa8.02□□□□□ -1.13
VPS11-201ENST00000524454 KCTD2Q14681 263 aa8.02□□□□□ -1.13
VPS11-201ENST00000524454 MUM1L1Q5H9M0 696 aa8.02□□□□□ -1.13
VPS11-201ENST00000524454 MAP3K21Q5TCX8 1036 aa8.02□□□□□ -1.13
VPS11-201ENST00000524454 KRT25Q7Z3Z0 450 aa8.02□□□□□ -1.13
VPS11-201ENST00000524454 BLIDQ8IZY5 108 aa8.02□□□□□ -1.13
VPS11-201ENST00000524454 MTMR8Q96EF0 704 aa8.02□□□□□ -1.13
VPS11-201ENST00000524454 MAML3Q96JK9 1138 aa8.02□□□□□ -1.13
VPS11-201ENST00000524454 NAP1L4Q99733 375 aaKnown RBP8.02□□□□□ -1.13
VPS11-201ENST00000524454 FTOQ9C0B1 505 aaKnown RBP eCLIP8.02□□□□□ -1.13
VPS11-201ENST00000524454 GOLPH3LQ9H4A5 285 aa8.02□□□□□ -1.13
VPS11-201ENST00000524454 FAM13BQ9NYF5 915 aa8.02□□□□□ -1.13
VPS11-201ENST00000524454 VPS54Q9P1Q0 977 aa8.02□□□□□ -1.13
VPS11-201ENST00000524454 FBXO2Q9UK22 296 aaPredicted RBP8.02□□□□□ -1.13
VPS11-201ENST00000524454 STXBP3O00186 592 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 CYTH3O43739 400 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 STRNO43815 780 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 ZNF202O95125 648 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 MYL1P05976 194 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 TPM3P06753 285 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 HOXC6P09630 235 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 ALAS1P13196 640 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 PFKFB1P16118 471 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 LONP1P36776 959 aaKnown RBP8.01□□□□□ -1.13
VPS11-201ENST00000524454 SYKP43405 635 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 NDUFA8P51970 172 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 CEBPZQ03701 1054 aaKnown RBP8.01□□□□□ -1.13
VPS11-201ENST00000524454 DHX8Q14562 1220 aaKnown RBP8.01□□□□□ -1.13
VPS11-201ENST00000524454 ZRSR1Q15695 479 aaKnown RBP8.01□□□□□ -1.13
VPS11-201ENST00000524454 ZNF792Q3KQV3 632 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 NT5DC1Q5TFE4 455 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 SYDE2Q5VT97 1194 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 MFSD14CQ5VZR4 134 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 FAM160B2Q86V87 743 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 TRMT44Q8IYL2 757 aaKnown RBP8.01□□□□□ -1.13
VPS11-201ENST00000524454 CEP57L1Q8IYX8 460 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 TRIML1Q8N9V2 468 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 CHURC1Q8WUH1 139 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 LENG1Q96BZ8 264 aaPredicted RBP8.01□□□□□ -1.13
VPS11-201ENST00000524454 TRIM44Q96DX7 344 aaPredicted RBP8.01□□□□□ -1.13
VPS11-201ENST00000524454 PAWRQ96IZ0 340 aaKnown RBP8.01□□□□□ -1.13
VPS11-201ENST00000524454 AK8Q96MA6 479 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 PURBQ96QR8 312 aaKnown RBP8.01□□□□□ -1.13
VPS11-201ENST00000524454 GTPBP4Q9BZE4 634 aaKnown RBP8.01□□□□□ -1.13
VPS11-201ENST00000524454 UBA5Q9GZZ9 404 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 C6orf50Q9HD87 102 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 GJB4Q9NTQ9 266 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 RNF146Q9NTX7 359 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 SEPT9Q9UHD8 586 aaPredicted RBP8.01□□□□□ -1.13
VPS11-201ENST00000524454 TUBE1Q9UJT0 475 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 KCNJ14Q9UNX9 436 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 MRVI1Q9Y6F6 885 aa8.01□□□□□ -1.13
VPS11-201ENST00000524454 PNMA6FA0A0J9YX94 578 aa8□□□□□ -1.13
VPS11-201ENST00000524454 SMAPO00193 183 aa8□□□□□ -1.13
VPS11-201ENST00000524454 ATP2A1O14983 1001 aa8□□□□□ -1.13
VPS11-201ENST00000524454 SLC26A4O43511 780 aa8□□□□□ -1.13
VPS11-201ENST00000524454 PLA2G6O60733 806 aa8□□□□□ -1.13
VPS11-201ENST00000524454 DTNBO60941 627 aa8□□□□□ -1.13
VPS11-201ENST00000524454 IGHA2P01877 340 aa8□□□□□ -1.13
VPS11-201ENST00000524454 CYBAP13498 195 aa8□□□□□ -1.13
VPS11-201ENST00000524454 CNTN2Q02246 1040 aa8□□□□□ -1.13
VPS11-201ENST00000524454 NR5A1Q13285 461 aa8□□□□□ -1.13
VPS11-201ENST00000524454 TTC38Q5R3I4 469 aa8□□□□□ -1.13
VPS11-201ENST00000524454 OLFML2BQ68BL8 750 aa8□□□□□ -1.13
VPS11-201ENST00000524454 WWC2Q6AWC2 1192 aa8□□□□□ -1.13
VPS11-201ENST00000524454 SHC4Q6S5L8 630 aa8□□□□□ -1.13
VPS11-201ENST00000524454 SARM1Q6SZW1 724 aa8□□□□□ -1.13
VPS11-201ENST00000524454 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8□□□□□ -1.13
VPS11-201ENST00000524454 UBE2Q1Q7Z7E8 422 aa8□□□□□ -1.13
VPS11-201ENST00000524454 CMTR1Q8N1G2 835 aaKnown RBP8□□□□□ -1.13
VPS11-201ENST00000524454 ANKRD35Q8N283 1001 aa8□□□□□ -1.13
VPS11-201ENST00000524454 STAG2Q8N3U4 1231 aa8□□□□□ -1.13
VPS11-201ENST00000524454 CCDC82Q8N4S0 544 aa8□□□□□ -1.13
VPS11-201ENST00000524454 FGD4Q96M96 766 aa8□□□□□ -1.13
VPS11-201ENST00000524454 TRERF1Q96PN7 1200 aa8□□□□□ -1.13
VPS11-201ENST00000524454 SDF4Q9BRK5 362 aa8□□□□□ -1.13
VPS11-201ENST00000524454 PANK2Q9BZ23 570 aa8□□□□□ -1.13
VPS11-201ENST00000524454 RANBP17Q9H2T7 1088 aaKnown RBP8□□□□□ -1.13
VPS11-201ENST00000524454 MAGEF1Q9HAY2 307 aa8□□□□□ -1.13
VPS11-201ENST00000524454 KCNH3Q9ULD8 1083 aa8□□□□□ -1.13
VPS11-201ENST00000524454 CCPG1Q9ULG6 757 aa8□□□□□ -1.13
VPS11-201ENST00000524454 MKI67P46013 3256 aaKnown RBP8□□□□□ -1.13
VPS11-201ENST00000524454 CCDC194A0A1B0GVG4 234 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 A0A1B0GVL5 298 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 NFIBO00712 420 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 IKBKBO14920 756 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 ZBTB5O15062 677 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 PPFIA3O75145 1194 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 GCFC2P16383 781 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms