RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 SUV39H2Q9H5I1 410 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 ZBTB21Q9ULJ3 1066 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 ZC3H4Q9UPT8 1303 aaKnown RBP7.77□□□□□ -1.17
CSMD1-211ENST00000523062 ESPNB1AK53 854 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 USP17L10C9JJH3 530 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 F5H6K3 240 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 WNT10BO00744 389 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 SMC2O95347 1197 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 NDUFB10O96000 172 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 OR52Z1P0C646 297 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 SLC16A2P36021 539 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 GMPSP49915 693 aaPredicted RBP7.76□□□□□ -1.17
CSMD1-211ENST00000523062 MRPL12P52815 198 aaKnown RBP7.76□□□□□ -1.17
CSMD1-211ENST00000523062 TPM4P67936 248 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 PTK2Q05397 1052 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 KLRC3Q07444 240 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 PNOCQ13519 176 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 RRP1BQ14684 758 aaKnown RBP7.76□□□□□ -1.17
CSMD1-211ENST00000523062 CDC37Q16543 378 aaPredicted RBP7.76□□□□□ -1.17
CSMD1-211ENST00000523062 QRICH1Q2TAL8 776 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 DPCR1Q3MIW9 517 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 SYDE2Q5VT97 1194 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 SIAH1Q8IUQ4 282 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 C4orf32Q8N8J7 132 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 TRIML1Q8N9V2 468 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 DPF2Q92785 391 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 ERCC4Q92889 916 aaPredicted RBP7.76□□□□□ -1.17
CSMD1-211ENST00000523062 CUL5Q93034 780 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 SMARCE1Q969G3 411 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 COA7Q96BR5 231 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 DHX58Q96C10 678 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 KLRG1Q96E93 195 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 TMEM39BQ9GZU3 492 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 NUCKS1Q9H1E3 243 aaKnown RBP7.76□□□□□ -1.17
CSMD1-211ENST00000523062 SH2D4AQ9H788 454 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 GOPCQ9HD26 462 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 RIC8AQ9NPQ8 531 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 NOP53Q9NZM5 478 aaKnown RBP7.76□□□□□ -1.17
CSMD1-211ENST00000523062 SERTAD1Q9UHV2 236 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 GPSM3Q9Y4H4 160 aa7.76□□□□□ -1.17
CSMD1-211ENST00000523062 ARFGEF1Q9Y6D6 1849 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 SMTNL1A8MU46 457 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 GOLGA6L6A8MZA4 724 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 FZD9O00144 591 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 BIN1O00499 593 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 NEMFO60524 1076 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 PPP1R11O60927 126 aaPredicted RBP7.75□□□□□ -1.17
CSMD1-211ENST00000523062 SLFN14P0C7P3 912 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 BMP3P12645 472 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 AMPD1P23109 780 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 CAP2P40123 477 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 CHRNA4P43681 627 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 RAB15P59190 212 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 JAG1P78504 1218 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 TRAF1Q13077 416 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 IKQ13123 557 aaPredicted RBP7.75□□□□□ -1.17
CSMD1-211ENST00000523062 LETM2Q2VYF4 491 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 NBPF9Q3BBW0 867 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 JAKMIP3Q5VZ66 844 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 MCTP2Q6DN12 878 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 SARM1Q6SZW1 724 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 BTNL9Q6UXG8 535 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 DTHD1Q6ZMT9 781 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 USP49Q70CQ1 688 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.75□□□□□ -1.17
CSMD1-211ENST00000523062 ZSCAN30Q86W11 494 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 AOPEPQ8N6M6 819 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 GOLGA6L1Q8N7Z2 621 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 PDILTQ8N807 584 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 IQUBQ8NA54 791 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 TBCKQ8TEA7 893 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 EPSTI1Q96J88 318 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 NAP1L4Q99733 375 aaKnown RBP7.75□□□□□ -1.17
CSMD1-211ENST00000523062 GINM1Q9NU53 330 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 BIN2Q9UBW5 565 aaPredicted RBP7.75□□□□□ -1.17
CSMD1-211ENST00000523062 TMX2Q9Y320 296 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 PCDHA5Q9Y5H7 936 aa7.75□□□□□ -1.17
CSMD1-211ENST00000523062 SRCAPQ6ZRS2 3230 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 A0A087WWV3 80 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 A0A087X0B3 334 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 A0A1W2PRG0 241 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 SHTN1A0MZ66 631 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 TMEM232C9JQI7 657 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 IKBKBO14920 756 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 AP5Z1O43299 807 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 CCNT1O60563 726 aaKnown RBP7.74□□□□□ -1.17
CSMD1-211ENST00000523062 TPM3P06753 285 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 ASNSP08243 561 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 GCFC2P16383 781 aaKnown RBP7.74□□□□□ -1.17
CSMD1-211ENST00000523062 CDC25BP30305 580 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 CLK2P49760 499 aaKnown RBP7.74□□□□□ -1.17
CSMD1-211ENST00000523062 ZNF75DP51815 510 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 POU4F2Q12837 409 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 AP3B2Q13367 1082 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 RASA3Q14644 834 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 IL17AQ16552 155 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 KIF4BQ2VIQ3 1234 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 NT5DC1Q5TFE4 455 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 FBXO11Q86XK2 927 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 TEX2Q8IWB9 1127 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms