RNA–Protein interactions for RNA: ENST00000521829.5

VPS37A-210, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS37A, Length 1,307 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-210ENST00000521829 PCNX4Q63HM2 1172 aa12.55□□□□□ -0.4
VPS37A-210ENST00000521829 CNKSR3Q6P9H4 555 aa12.55□□□□□ -0.4
VPS37A-210ENST00000521829 USP17L6PQ6QN14 398 aa12.55□□□□□ -0.4
VPS37A-210ENST00000521829 CYFIP1Q7L576 1253 aa12.55□□□□□ -0.4
VPS37A-210ENST00000521829 DHX32Q7L7V1 743 aaKnown RBP12.55□□□□□ -0.4
VPS37A-210ENST00000521829 HERC6Q8IVU3 1022 aa12.55□□□□□ -0.4
VPS37A-210ENST00000521829 SRBD1Q8N5C6 995 aaKnown RBP12.55□□□□□ -0.4
VPS37A-210ENST00000521829 GIMAP8Q8ND71 665 aaPredicted RBP12.55□□□□□ -0.4
VPS37A-210ENST00000521829 GPKOWQ92917 476 aaPredicted RBP eCLIP12.55□□□□□ -0.4
VPS37A-210ENST00000521829 CTAGE1Q96RT6 745 aa12.55□□□□□ -0.4
VPS37A-210ENST00000521829 TUT1Q9H6E5 874 aaKnown RBP12.55□□□□□ -0.4
VPS37A-210ENST00000521829 PSTPIP2Q9H939 334 aa12.55□□□□□ -0.4
VPS37A-210ENST00000521829 FRMPD4Q14CM0 1322 aa12.55□□□□□ -0.4
VPS37A-210ENST00000521829 ABHD14A-ACY1A0A1B0GW23 586 aa12.54□□□□□ -0.4
VPS37A-210ENST00000521829 GTPBP6O43824 516 aaPredicted RBP12.54□□□□□ -0.4
VPS37A-210ENST00000521829 TLL1O43897 1013 aa12.54□□□□□ -0.4
VPS37A-210ENST00000521829 EFCAB14O75071 495 aa12.54□□□□□ -0.4
VPS37A-210ENST00000521829 LGALS2P05162 132 aa12.54□□□□□ -0.4
VPS37A-210ENST00000521829 GNAT1P11488 350 aa12.54□□□□□ -0.4
VPS37A-210ENST00000521829 ZNF200P98182 395 aaPredicted RBP12.54□□□□□ -0.4
VPS37A-210ENST00000521829 EXOSC10Q01780 885 aaKnown RBP12.54□□□□□ -0.4
VPS37A-210ENST00000521829 IKBKEQ14164 716 aa12.54□□□□□ -0.4
VPS37A-210ENST00000521829 ADGRE1Q14246 886 aa12.54□□□□□ -0.4
VPS37A-210ENST00000521829 ZNF618Q5T7W0 954 aa12.54□□□□□ -0.4
VPS37A-210ENST00000521829 METTL7BQ6UX53 244 aa12.54□□□□□ -0.4
VPS37A-210ENST00000521829 CMTR1Q8N1G2 835 aaKnown RBP12.54□□□□□ -0.4
VPS37A-210ENST00000521829 CCDC82Q8N4S0 544 aa12.54□□□□□ -0.4
VPS37A-210ENST00000521829 USP38Q8NB14 1042 aa12.54□□□□□ -0.4
VPS37A-210ENST00000521829 FANCBQ8NB91 859 aa12.54□□□□□ -0.4
VPS37A-210ENST00000521829 DHX38Q92620 1227 aaKnown RBP12.54□□□□□ -0.4
VPS37A-210ENST00000521829 ATP6V0A1Q93050 837 aa12.54□□□□□ -0.4
VPS37A-210ENST00000521829 INPP4AQ96PE3 977 aaPredicted RBP12.54□□□□□ -0.4
VPS37A-210ENST00000521829 C16orf70Q9BSU1 422 aa12.54□□□□□ -0.4
VPS37A-210ENST00000521829 LRRC2Q9BYS8 371 aa12.54□□□□□ -0.4
VPS37A-210ENST00000521829 ZNF215Q9UL58 517 aaPredicted RBP12.54□□□□□ -0.4
VPS37A-210ENST00000521829 SPDYE3A6NKU9 549 aa12.53□□□□□ -0.4
VPS37A-210ENST00000521829 MEIS2O14770 477 aa12.53□□□□□ -0.4
VPS37A-210ENST00000521829 CXCL10P02778 98 aa12.53□□□□□ -0.4
VPS37A-210ENST00000521829 PSMA5P28066 241 aa12.53□□□□□ -0.4
VPS37A-210ENST00000521829 THPOP40225 353 aa12.53□□□□□ -0.4
VPS37A-210ENST00000521829 WDR5P61964 334 aaKnown RBP12.53□□□□□ -0.4
VPS37A-210ENST00000521829 ADCK5Q3MIX3 580 aa12.53□□□□□ -0.4
VPS37A-210ENST00000521829 UTP14CQ5TAP6 766 aaKnown RBP12.53□□□□□ -0.4
VPS37A-210ENST00000521829 SGMS1Q86VZ5 419 aa12.53□□□□□ -0.4
VPS37A-210ENST00000521829 MICU3Q86XE3 530 aa12.53□□□□□ -0.4
VPS37A-210ENST00000521829 RAB11FIP4Q86YS3 637 aa12.53□□□□□ -0.4
VPS37A-210ENST00000521829 MICALL1Q8N3F8 863 aa12.53□□□□□ -0.4
VPS37A-210ENST00000521829 ATXN2LQ8WWM7 1075 aaKnown RBP12.53□□□□□ -0.4
VPS37A-210ENST00000521829 CDHR1Q96JP9 859 aa12.53□□□□□ -0.4
VPS37A-210ENST00000521829 SENP7Q9BQF6 1050 aa12.53□□□□□ -0.4
VPS37A-210ENST00000521829 EHMT1Q9H9B1 1298 aa12.53□□□□□ -0.4
VPS37A-210ENST00000521829 SNX14Q9Y5W7 946 aa12.53□□□□□ -0.4
VPS37A-210ENST00000521829 EMSYQ7Z589 1322 aa12.53□□□□□ -0.4
VPS37A-210ENST00000521829 TET1Q8NFU7 2136 aa12.52□□□□□ -0.4
VPS37A-210ENST00000521829 RSPH10B2B2RC85 870 aa12.52□□□□□ -0.41
VPS37A-210ENST00000521829 NBNO60934 754 aa12.52□□□□□ -0.41
VPS37A-210ENST00000521829 RSPH10BP0C881 870 aa12.52□□□□□ -0.41
VPS37A-210ENST00000521829 SMIM10L2AP0DMW4 78 aa12.52□□□□□ -0.41
VPS37A-210ENST00000521829 SMIM10L2BP0DMW5 78 aa12.52□□□□□ -0.41
VPS37A-210ENST00000521829 SP4Q02446 784 aa12.52□□□□□ -0.41
VPS37A-210ENST00000521829 COL9A3Q14050 684 aaPredicted RBP12.52□□□□□ -0.41
VPS37A-210ENST00000521829 HEATR3Q7Z4Q2 680 aa12.52□□□□□ -0.41
VPS37A-210ENST00000521829 SERINC5Q86VE9 423 aa12.52□□□□□ -0.41
VPS37A-210ENST00000521829 JAKMIP1Q96N16 626 aaKnown RBP12.52□□□□□ -0.41
VPS37A-210ENST00000521829 GPR20Q99678 358 aa12.52□□□□□ -0.41
VPS37A-210ENST00000521829 BCAS3Q9H6U6 928 aa12.52□□□□□ -0.41
VPS37A-210ENST00000521829 CERS4Q9HA82 394 aa12.52□□□□□ -0.41
VPS37A-210ENST00000521829 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.41
VPS37A-210ENST00000521829 THEGQ9P2T0 379 aa12.52□□□□□ -0.41
VPS37A-210ENST00000521829 ARIH1Q9Y4X5 557 aaPredicted RBP12.52□□□□□ -0.41
VPS37A-210ENST00000521829 DOCK5Q9H7D0 1870 aa12.51□□□□□ -0.41
VPS37A-210ENST00000521829 hCG_1642624A0A1W2PR95 340 aa12.51□□□□□ -0.41
VPS37A-210ENST00000521829 LGR5O75473 907 aa12.51□□□□□ -0.41
VPS37A-210ENST00000521829 MRPS5P82675 430 aaKnown RBP12.51□□□□□ -0.41
VPS37A-210ENST00000521829 FGD1P98174 961 aa12.51□□□□□ -0.41
VPS37A-210ENST00000521829 TAP1Q03518 808 aa12.51□□□□□ -0.41
VPS37A-210ENST00000521829 SEMA3FQ13275 785 aa12.51□□□□□ -0.41
VPS37A-210ENST00000521829 GPNMBQ14956 572 aa12.51□□□□□ -0.41
VPS37A-210ENST00000521829 SKIV2LQ15477 1246 aaKnown RBP12.51□□□□□ -0.41
VPS37A-210ENST00000521829 TRIM71Q2Q1W2 868 aaKnown RBP12.51□□□□□ -0.41
VPS37A-210ENST00000521829 TMTC3Q6ZXV5 915 aa12.51□□□□□ -0.41
VPS37A-210ENST00000521829 FBXL16Q8N461 479 aa12.51□□□□□ -0.41
VPS37A-210ENST00000521829 ARNTL2Q8WYA1 636 aa12.51□□□□□ -0.41
VPS37A-210ENST00000521829 GPRASP2Q96D09 838 aa12.51□□□□□ -0.41
VPS37A-210ENST00000521829 C1QTNF1Q9BXJ1 281 aa12.51□□□□□ -0.41
VPS37A-210ENST00000521829 RNPEPQ9H4A4 650 aa12.51□□□□□ -0.41
VPS37A-210ENST00000521829 PCDHA6Q9UN73 950 aa12.51□□□□□ -0.41
VPS37A-210ENST00000521829 PCDHA8Q9Y5H6 950 aa12.51□□□□□ -0.41
VPS37A-210ENST00000521829 KAT6AQ92794 2004 aa12.51□□□□□ -0.41
VPS37A-210ENST00000521829 CDH23Q9H251 3354 aa12.5□□□□□ -0.41
VPS37A-210ENST00000521829 RFXAPO00287 272 aa12.5□□□□□ -0.41
VPS37A-210ENST00000521829 MAFGO15525 162 aa12.5□□□□□ -0.41
VPS37A-210ENST00000521829 TREHO43280 583 aa12.5□□□□□ -0.41
VPS37A-210ENST00000521829 ZBTB43O43298 467 aa12.5□□□□□ -0.41
VPS37A-210ENST00000521829 AMHP03971 560 aa12.5□□□□□ -0.41
VPS37A-210ENST00000521829 RCAN1P53805 252 aa12.5□□□□□ -0.41
VPS37A-210ENST00000521829 DEFB103AP81534 67 aa12.5□□□□□ -0.41
VPS37A-210ENST00000521829 ARHGAP4P98171 946 aa12.5□□□□□ -0.41
VPS37A-210ENST00000521829 MTMR1Q13613 665 aa12.5□□□□□ -0.41
VPS37A-210ENST00000521829 HIC1Q14526 733 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms