RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 USP38Q8NB14 1042 aa14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 SAMD15Q9P1V8 674 aa14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 ATP6V0A2Q9Y487 856 aa14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 EIF6P56537 245 aaKnown RBP14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 CCDC25Q86WR0 208 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 MAPKAPK5Q8IW41 473 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 NUCKS1Q9H1E3 243 aaKnown RBP14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 ABCB4P21439 1286 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 MTMR3Q13615 1198 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 CENPPQ6IPU0 288 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 TBC1D1Q86TI0 1168 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 CCDC50Q8IVM0 306 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 LRRC15Q8TF66 581 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 TGFBRAP1Q8WUH2 860 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 RSRC1Q96IZ7 334 aaKnown RBP14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 TACO1Q9BSH4 297 aaKnown RBP14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 CELF4Q9BZC1 486 aaKnown RBP14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 TMBIM4Q9HC24 238 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 CEP72Q9P209 647 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 RGPD5Q99666 1765 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 SSU72P8A0A1W2PR75 194 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 FNTAP49354 379 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 LRRC63Q05C16 580 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 ITGB3BPQ13352 177 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 PPP4R3AQ6IN85 833 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 MGARPQ8TDB4 240 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 U2AF1L4Q8WU68 220 aaKnown RBP14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 PANK4Q9NVE7 773 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 BARHL2Q9NY43 387 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 CD2APQ9Y5K6 639 aa14.04□□□□□ -0.16
TRAPPC9-208ENST00000520857 HIBADHP31937 336 aaKnown RBP14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 SLCO1A2P46721 670 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 ADAM9Q13443 819 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 NAB2Q15742 525 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 ZSCAN29Q8IWY8 852 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 GUF1Q8N442 669 aaKnown RBP14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 GJA10Q969M2 543 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 CARD10Q9BWT7 1032 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 ATP8A2Q9NTI2 1148 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 SWAP70Q9UH65 585 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 GGT7Q9UJ14 662 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 OPLAHO14841 1288 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 ORC4O43929 436 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 ACTN1P12814 892 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 SLC18A3Q16572 532 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 QPCTQ16769 361 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 CCDC63Q8NA47 563 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 CCDC197Q8NCU1 140 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 SGSM3Q96HU1 749 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 PIGSQ96S52 555 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 SH3GLB2Q9NR46 395 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 TMEM94Q12767 1356 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 MYH2Q9UKX2 1941 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 MYH13Q9UKX3 1938 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 CETN3O15182 167 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 TTI1O43156 1089 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 CUL1Q13616 776 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 ALKBH5Q6P6C2 394 aaKnown RBP14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 RAPGEF5Q92565 580 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 COA7Q96BR5 231 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 LRRC27Q9C0I9 530 aa14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 NOC2LQ9Y3T9 749 aaKnown RBP14.03□□□□□ -0.16
TRAPPC9-208ENST00000520857 FRMPD2Q68DX3 1309 aaPredicted RBP14.02□□□□□ -0.16
TRAPPC9-208ENST00000520857 GRID2IPA4D2P6 1211 aa14.02□□□□□ -0.16
TRAPPC9-208ENST00000520857 TMEM110-MUSTN1A8MSY1 372 aa14.02□□□□□ -0.16
TRAPPC9-208ENST00000520857 KIF4AO95239 1232 aa14.02□□□□□ -0.16
TRAPPC9-208ENST00000520857 MYCNP04198 464 aaPredicted RBP14.02□□□□□ -0.16
TRAPPC9-208ENST00000520857 IL6STP40189 918 aaPredicted RBP14.02□□□□□ -0.16
TRAPPC9-208ENST00000520857 BAP1Q92560 729 aa14.02□□□□□ -0.16
TRAPPC9-208ENST00000520857 ANKS1AQ92625 1134 aa14.02□□□□□ -0.16
TRAPPC9-208ENST00000520857 DONSONQ9NYP3 566 aa14.02□□□□□ -0.16
TRAPPC9-208ENST00000520857 SCN11AQ9UI33 1791 aa14.02□□□□□ -0.16
TRAPPC9-208ENST00000520857 STXBP3O00186 592 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 TDP2O95551 362 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 PLTPP55058 493 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 GSCP56915 257 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 GALNT17Q6IS24 598 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 ELAC2Q9BQ52 826 aaKnown RBP14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 PNMA2Q9UL42 364 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 LEMD3Q9Y2U8 911 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 SLC8A1P32418 973 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 PDE6BP35913 854 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 MYO1EQ12965 1108 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 BIRC3Q13489 604 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 CCDC65Q8IXS2 484 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 ZNF34Q8IZ26 560 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 FUKQ8N0W3 1084 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 LMBR1Q8WVP7 490 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 THOC1Q96FV9 657 aaKnown RBP14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 FAM84BQ96KN1 310 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 TMEM47Q9BQJ4 181 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 ISCUQ9H1K1 167 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 GPCPD1Q9NPB8 672 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 TPX2Q9ULW0 747 aaKnown RBP14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 STK38LQ9Y2H1 464 aa14.02□□□□□ -0.17
TRAPPC9-208ENST00000520857 GOLGA6L10A0A0M3HER8 536 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 ERVV-1B6SEH8 477 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 FLOT1O75955 427 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 PEX19P40855 299 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 PRPHP41219 470 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms