RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 CHST3Q7LGC8 479 aa9.42□□□□□ -0.9
CSMD1-209ENST00000520630 SERINC5Q86VE9 423 aa9.42□□□□□ -0.9
CSMD1-209ENST00000520630 IFNL3Q8IZI9 196 aa9.42□□□□□ -0.9
CSMD1-209ENST00000520630 CLP1Q92989 425 aaKnown RBP9.42□□□□□ -0.9
CSMD1-209ENST00000520630 KIF1BPQ96EK5 621 aa9.42□□□□□ -0.9
CSMD1-209ENST00000520630 DDRGK1Q96HY6 314 aa9.42□□□□□ -0.9
CSMD1-209ENST00000520630 SEC62Q99442 399 aaKnown RBP9.42□□□□□ -0.9
CSMD1-209ENST00000520630 MYH9P35579 1960 aaKnown RBP9.41□□□□□ -0.9
CSMD1-209ENST00000520630 MTCL1Q9Y4B5 1905 aaKnown RBP9.41□□□□□ -0.9
CSMD1-209ENST00000520630 PATJQ8NI35 1801 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 RSPH10B2B2RC85 870 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 GPAA1O43292 621 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 GALR2O43603 387 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-209ENST00000520630 GH1P01241 217 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 MMP1P03956 469 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 RSPH10BP0C881 870 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 TSPY3P0CV98 308 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 TSPY8P0CW00 308 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 PDE4AP27815 886 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 CTNNB1P35222 781 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 ID4P47928 161 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 PDE4BQ07343 736 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 TMEM105Q8N8V8 129 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 DNERQ8NFT8 737 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 VN1R2Q8NFZ6 395 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 ZNF689Q96CS4 500 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-209ENST00000520630 TAAR1Q96RJ0 339 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 YME1L1Q96TA2 773 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 LMAN2LQ9H0V9 348 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 BCL11AQ9H165 835 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 BCAS3Q9H6U6 928 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 DDX41Q9UJV9 622 aaKnown RBP9.41□□□□□ -0.9
CSMD1-209ENST00000520630 ISY1Q9ULR0 285 aaKnown RBP9.41□□□□□ -0.9
CSMD1-209ENST00000520630 MTMR7Q9Y216 660 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 USP15Q9Y4E8 981 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-209ENST00000520630 PCDHGC5Q9Y5F6 944 aa9.41□□□□□ -0.9
CSMD1-209ENST00000520630 USP24Q9UPU5 2620 aa9.4□□□□□ -0.9
CSMD1-209ENST00000520630 FRMPD2Q68DX3 1309 aaPredicted RBP9.4□□□□□ -0.9
CSMD1-209ENST00000520630 EMSYQ7Z589 1322 aa9.4□□□□□ -0.9
CSMD1-209ENST00000520630 PATL2C9JE40 543 aaKnown RBP9.4□□□□□ -0.9
CSMD1-209ENST00000520630 CSPG5O95196 566 aa9.4□□□□□ -0.9
CSMD1-209ENST00000520630 RB1P06400 928 aa9.4□□□□□ -0.9
CSMD1-209ENST00000520630 CASTP20810 708 aaKnown RBP9.4□□□□□ -0.9
CSMD1-209ENST00000520630 THPOP40225 353 aa9.4□□□□□ -0.9
CSMD1-209ENST00000520630 SYDE2Q5VT97 1194 aa9.4□□□□□ -0.9
CSMD1-209ENST00000520630 SEPT14Q6ZU15 432 aa9.4□□□□□ -0.9
CSMD1-209ENST00000520630 CRIPAKQ8N1N5 446 aa9.4□□□□□ -0.9
CSMD1-209ENST00000520630 C7orf31Q8N865 590 aa9.4□□□□□ -0.9
CSMD1-209ENST00000520630 SPPL3Q8TCT6 385 aa9.4□□□□□ -0.9
CSMD1-209ENST00000520630 SUSD6Q92537 303 aa9.4□□□□□ -0.9
CSMD1-209ENST00000520630 APPBP2Q92624 585 aa9.4□□□□□ -0.9
CSMD1-209ENST00000520630 EMID1Q96A84 441 aaPredicted RBP9.4□□□□□ -0.9
CSMD1-209ENST00000520630 RIPOR3Q96MK2 946 aa9.4□□□□□ -0.9
CSMD1-209ENST00000520630 C16orf70Q9BSU1 422 aa9.4□□□□□ -0.9
CSMD1-209ENST00000520630 SMOC2Q9H3U7 446 aa9.4□□□□□ -0.9
CSMD1-209ENST00000520630 BARX2Q9UMQ3 279 aaPredicted RBP9.4□□□□□ -0.9
CSMD1-209ENST00000520630 PLAGL2Q9UPG8 496 aa9.4□□□□□ -0.9
CSMD1-209ENST00000520630 TREHO43280 583 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 ITGB1P05556 798 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 ICAM3P32942 547 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 TDO2P48775 406 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 SP2Q02086 613 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 CTDSPL2Q05D32 466 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 PPARAQ07869 468 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 DGKDQ16760 1214 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 PTPN21Q16825 1174 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 HSDL1Q3SXM5 330 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 ANKRD45Q5TZF3 282 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 FRMD5Q7Z6J6 570 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 CHD1LQ86WJ1 897 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 FIBCD1Q8N539 461 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 EFHBQ8N7U6 833 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 KBTBD3Q8NAB2 608 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 DCAF4Q8WV16 495 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 IL17RAQ96F46 866 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 PHF7Q9BWX1 381 aaPredicted RBP9.39□□□□□ -0.91
CSMD1-209ENST00000520630 IFIH1Q9BYX4 1025 aaKnown RBP9.39□□□□□ -0.91
CSMD1-209ENST00000520630 CPVLQ9H3G5 476 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 STX8Q9UNK0 236 aa9.39□□□□□ -0.91
CSMD1-209ENST00000520630 ADGRA3Q8IWK6 1321 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 RNF113AO15541 343 aaKnown RBP9.38□□□□□ -0.91
CSMD1-209ENST00000520630 SMARCA5O60264 1052 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-209ENST00000520630 RAB11FIP3O75154 756 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 NDUFV1P49821 464 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 ADAM17P78536 824 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 KCNC3Q14003 757 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 HSP90AB4PQ58FF6 505 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 MYSM1Q5VVJ2 828 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 ZSCAN25Q6NSZ9 544 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 ADSSL1Q8N142 457 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 PPTC7Q8NI37 304 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 SYTL5Q8TDW5 730 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-209ENST00000520630 ATP8B4Q8TF62 1192 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 LINC01599Q8WXQ3 324 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 SEPT8Q92599 483 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 GPKOWQ92917 476 aaPredicted RBP eCLIP9.38□□□□□ -0.91
CSMD1-209ENST00000520630 RMDN1Q96DB5 314 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 RPGRIP1Q96KN7 1286 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 TMEM47Q9BQJ4 181 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 C11orf84Q9BUA3 381 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms