RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 FAM47CQ5HY64 1035 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 BRAPQ7Z569 592 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 SEC14L1Q92503 715 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 NINJ1Q92982 152 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 CLUHP3Q96NS8 147 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 BDH2Q9BUT1 245 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 MAGEC2Q9UBF1 373 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 FBLN5Q9UBX5 448 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 FBXL7Q9UJT9 491 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 DBR1Q9UK59 544 aaKnown RBP4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 PCDHA9Q9Y5H5 950 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 PCDHA8Q9Y5H6 950 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 CD2APQ9Y5K6 639 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 TCRBV16S1A1N1A0A5B0 115 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 NUDT19A8MXV4 375 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 F8W031 263 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 KRIT1O00522 736 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 ASLP04424 464 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 FLT3P36888 993 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 TKFCQ3LXA3 575 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 EGFLAMQ63HQ2 1017 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 CYP4F22Q6NT55 531 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 RPTNQ6XPR3 784 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 FRMD5Q7Z6J6 570 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 ZC3H7AQ8IWR0 971 aaKnown RBP4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 ZDHHC14Q8IZN3 488 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 PCDH19Q8TAB3 1148 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 FBXW5Q969U6 566 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 SCLYQ96I15 445 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 GCM1Q9NP62 436 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 KLHL14Q9P2G3 628 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 NUB1Q9Y5A7 615 aa4.77□□□□□ -1.65
HMGB1P41-201ENST00000520234 SHROOM4Q9ULL8 1493 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 HGSO14964 777 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 RASGRP1O95267 797 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 FSHBP01225 129 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 SDHBP21912 280 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 IGFALSP35858 605 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 ST5P78524 1137 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 SSPNQ14714 243 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 PLEKHN1Q494U1 663 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 DALRD3Q5D0E6 543 aaKnown RBP4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 EMC4Q5J8M3 183 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 TMEM132EQ6IEE7 984 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 ZC3H14Q6PJT7 736 aaKnown RBP4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 C16orf59Q7L2K0 433 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 FGD2Q7Z6J4 655 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 ZNF605Q86T29 641 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 NIM1KQ8IY84 436 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 PHOSPHO1Q8TCT1 267 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 MFSD3Q96ES6 412 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 TSPAN17Q96FV3 270 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 JAM3Q9BX67 310 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 SLITRK6Q9H5Y7 841 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 IPPKQ9H8X2 491 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 SLC6A20Q9NP91 592 aa4.76□□□□□ -1.65
HMGB1P41-201ENST00000520234 MATN3O15232 486 aa4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 TADA3O75528 432 aa4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 DNAJC8O75937 253 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 GNAT1P11488 350 aa4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 AFF3P51826 1226 aaKnown RBP4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 GYS2P54840 703 aa4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 PRR5P85299 388 aa4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 CRY1Q16526 586 aa4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 HABP4Q5JVS0 413 aaKnown RBP4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 STEAP3Q658P3 488 aa4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 UBE2R2Q712K3 238 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 OTOP3Q7RTS5 596 aa4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 DDX53Q86TM3 631 aaKnown RBP4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 TRIM48Q8IWZ4 208 aa4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 DACT3Q96B18 629 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 KCNJ15Q99712 375 aa4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 ADAM7Q9H2U9 754 aa4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 SMOC1Q9H4F8 434 aa4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 PPARGC1AQ9UBK2 798 aaKnown RBP4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 ZNF652Q9Y2D9 606 aa4.75□□□□□ -1.65
HMGB1P41-201ENST00000520234 CCDC66A2RUB6 948 aa4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 SGSM2O43147 1006 aa4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 OPA1O60313 960 aa4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 PI3P19957 117 aa4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 POU3F2P20265 443 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 VIPR1P32241 457 aa4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 GPR19Q15760 415 aa4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 ZNF827Q17R98 1081 aa4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 TM4SF20Q53R12 229 aa4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 ZCCHC8Q6NZY4 707 aaKnown RBP4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 TMC6Q7Z403 805 aa4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 AHI1Q8N157 1196 aa4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 UHMK1Q8TAS1 419 aaKnown RBP4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 PIP4K2CQ8TBX8 421 aa4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 CELF4Q9BZC1 486 aaKnown RBP4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 PDGFDQ9GZP0 370 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 CATSPERZQ9NTU4 200 aa4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 SIRT5Q9NXA8 310 aa4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 PRKAB1Q9Y478 270 aa4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 PCDHB4Q9Y5E5 795 aa4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 TNPO3Q9Y5L0 923 aaKnown RBP4.74□□□□□ -1.65
HMGB1P41-201ENST00000520234 CKMP06732 381 aa4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 SRGAP2CP0DJJ0 459 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms