RNA–Protein interactions for RNA: ENST00000518228.1

HACE1-207, Transcript of HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best)

Gene HACE1, Length 2,663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACE1-207ENST00000518228 CLASRPQ8N2M8 674 aaKnown RBP3.41□□□□□ -1.86
HACE1-207ENST00000518228 ZNF496Q96IT1 587 aaPredicted RBP3.41□□□□□ -1.86
HACE1-207ENST00000518228 TMEM87BQ96K49 555 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 HELLSQ9NRZ9 838 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 GGA1Q9UJY5 639 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 MRPS23Q9Y3D9 190 aaKnown RBP3.41□□□□□ -1.86
HACE1-207ENST00000518228 STARD13Q9Y3M8 1113 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 LAMA4Q16363 1823 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 UBR3Q6ZT12 1888 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 TRBV23-1A0A0A0MS06 115 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 A0A1W2PQU0 124 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 DCDC2CA8MYV0 355 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 CHURC1-FNTBB4DL54 471 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 MAFGO15525 162 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 PDE8AO60658 829 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 MYL1P05976 194 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 LIG1P18858 919 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 MX1P20591 662 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 PDE1AP54750 535 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 DCTN1Q14203 1278 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 GAS6Q14393 721 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 SV2CQ496J9 727 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 NUTM2GQ5VZR2 741 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 MSL1Q68DK7 614 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 PPM1KQ8N3J5 372 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 DTWD1Q8N5C7 304 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 FBXO41Q8TF61 875 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 NUDT8Q8WV74 236 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 LTV1Q96GA3 475 aaPredicted RBP3.41□□□□□ -1.86
HACE1-207ENST00000518228 INTS4Q96HW7 963 aaKnown RBP3.41□□□□□ -1.86
HACE1-207ENST00000518228 SCYL1Q96KG9 808 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 ZSCAN31Q96LW9 406 aaPredicted RBP3.41□□□□□ -1.86
HACE1-207ENST00000518228 CCDC74BQ96LY2 380 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 WDR18Q9BV38 432 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 GBP3Q9H0R5 595 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 ARHGEF4Q9NR80 690 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 PICK1Q9NRD5 415 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 ECHDC1Q9NTX5 307 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 C9orf78Q9NZ63 289 aaPredicted RBP3.41□□□□□ -1.86
HACE1-207ENST00000518228 PCDHB10Q9UN67 800 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 HIF3AQ9Y2N7 669 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 SH3TC1Q8TE82 1336 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 DLEC1Q9Y238 1755 aa3.41□□□□□ -1.86
HACE1-207ENST00000518228 LOC100289279A0A1B0GTE1 492 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 E2F8A0AVK6 867 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 PI4KAP2A4QPH2 592 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 GSG1L2A8MUP6 293 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 ECEL1O95672 775 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 IGKV5-2P06315 115 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 HSP90AA1P07900 732 aaKnown RBP3.4□□□□□ -1.86
HACE1-207ENST00000518228 EPXP11678 715 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 RGS19P49795 217 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 FKBP1AP62942 108 aaKnown RBP3.4□□□□□ -1.86
HACE1-207ENST00000518228 NFKB2Q00653 900 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 ANKRD1Q15327 319 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 TRIM61Q5EBN2 209 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 HEATR6Q6AI08 1181 aaKnown RBP3.4□□□□□ -1.86
HACE1-207ENST00000518228 RNF180Q86T96 592 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 PHACTR4Q8IZ21 702 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 CRACR2BQ8N4Y2 399 aaPredicted RBP3.4□□□□□ -1.86
HACE1-207ENST00000518228 PI4KAP1Q8N8J0 262 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 XAGE3Q8WTP9 111 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 PIGBQ92521 554 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 EXOC2Q96KP1 924 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 MEIS3Q99687 375 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 THUMPD2Q9BTF0 503 aaKnown RBP3.4□□□□□ -1.86
HACE1-207ENST00000518228 USP26Q9BXU7 913 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 ANKRD2Q9GZV1 360 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 ATXN3LQ9H3M9 355 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 TJP2Q9UDY2 1190 aa3.4□□□□□ -1.86
HACE1-207ENST00000518228 MORC2Q9Y6X9 1032 aaPredicted RBP3.4□□□□□ -1.86
HACE1-207ENST00000518228 NID2Q14112 1375 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 SALL1Q9NSC2 1324 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 KLRG2A4D1S0 409 aaPredicted RBP3.4□□□□□ -1.87
HACE1-207ENST00000518228 TERTO14746 1132 aaKnown RBP3.4□□□□□ -1.87
HACE1-207ENST00000518228 TM4SF5O14894 197 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 CLEC3AO75596 197 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 POU3F3P20264 500 aaPredicted RBP3.4□□□□□ -1.87
HACE1-207ENST00000518228 FBLN1P23142 703 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 GNALP38405 381 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 CDKN1CP49918 316 aaPredicted RBP3.4□□□□□ -1.87
HACE1-207ENST00000518228 RBM6P78332 1123 aaKnown RBP3.4□□□□□ -1.87
HACE1-207ENST00000518228 FOXO4P98177 505 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 BRD3Q15059 726 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 ALX1Q15699 326 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 ANKRD39Q53RE8 183 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 BRDTQ58F21 947 aaPredicted RBP3.4□□□□□ -1.87
HACE1-207ENST00000518228 EXOSC6Q5RKV6 272 aaKnown RBP3.4□□□□□ -1.87
HACE1-207ENST00000518228 G2E3Q7L622 706 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 NECAB2Q7Z6G3 386 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 C12orf40Q86WS4 652 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 USHBP1Q8N6Y0 703 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 RNF214Q8ND24 703 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 SLC6A18Q96N87 628 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 NAP1L4Q99733 375 aaKnown RBP3.4□□□□□ -1.87
HACE1-207ENST00000518228 HAUS7Q99871 368 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 LRRC4BQ9NT99 713 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 SUSD2Q9UGT4 822 aa3.4□□□□□ -1.87
HACE1-207ENST00000518228 NARFQ9UHQ1 456 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms