RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-204	ENST00000517824	AS3MT	Q9HBK9	375 aa		11.97	□□□□□ -0.49
SPIDR-204	ENST00000517824	KCNMB3	Q9NPA1	279 aa		11.97	□□□□□ -0.49
SPIDR-204	ENST00000517824	BLOC1S4	Q9NUP1	217 aa		11.97	□□□□□ -0.49
SPIDR-204	ENST00000517824	DNM3	Q9UQ16	869 aa		11.97	□□□□□ -0.49
SPIDR-204	ENST00000517824	PPP2R2C	Q9Y2T4	447 aa		11.97	□□□□□ -0.49
SPIDR-204	ENST00000517824	POLR2A	P24928	1970 aa	Known RBP	11.97	□□□□□ -0.49
SPIDR-204	ENST00000517824	ARID2	Q68CP9	1835 aa		11.97	□□□□□ -0.49
SPIDR-204	ENST00000517824	MYH9	P35579	1960 aa	Known RBP	11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824		A0A1W2PQC6	194 aa		11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	POTEB3	A0JP26	581 aa		11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	TRIM21	P19474	475 aa	Known RBP	11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	CASP14	P31944	242 aa		11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	GMPS	P49915	693 aa	Predicted RBP	11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	USP14	P54578	494 aa		11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	MAP2K1	Q02750	393 aa	Predicted RBP	11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	RRP1B	Q14684	758 aa	Known RBP	11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	NBPF9	Q3BBW0	867 aa		11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	HYI	Q5T013	277 aa		11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	LRCH2	Q5VUJ6	765 aa		11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	POTEB	Q6S5H4	581 aa		11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	CYP26C1	Q6V0L0	522 aa		11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	KRT26	Q7Z3Y9	468 aa		11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	MCF2L2	Q86YR7	1114 aa		11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	TMTC1	Q8IUR5	882 aa		11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	CCDC43	Q96MW1	224 aa	Known RBP	11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	PICK1	Q9NRD5	415 aa		11.96	□□□□□ -0.49
SPIDR-204	ENST00000517824	POTEF	A5A3E0	1075 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824		B4DLN1	442 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	GAS7	O60861	476 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	CYP3A4	P08684	503 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	FCER1A	P12319	257 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	CASQ1	P31415	396 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	CIITA	P33076	1130 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	STAT3	P40763	770 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	ZNF280A	P59817	542 aa	Predicted RBP	11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	JAG1	P78504	1218 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	MKRN4P	Q13434	485 aa	Predicted RBP	11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	ARHGAP29	Q52LW3	1261 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	CYP4F22	Q6NT55	531 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	POTEG	Q6S5H5	508 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	POTEE	Q6S8J3	1075 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	SYT10	Q6XYQ8	523 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	KCTD17	Q8N5Z5	321 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	MB21D1	Q8N884	522 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	RETREG2	Q8NC44	543 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	MNS1	Q8NEH6	495 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	CAPNS2	Q96L46	248 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	UIMC1	Q96RL1	719 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	TEKT3	Q9BXF9	490 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	WDR11	Q9BZH6	1224 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	TMX1	Q9H3N1	280 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	ADARB2	Q9NS39	739 aa	Known RBP	11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	GPRC5D	Q9NZD1	345 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	DNAI1	Q9UI46	699 aa		11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	LUC7L2	Q9Y383	392 aa	Known RBP	11.95	□□□□□ -0.5
SPIDR-204	ENST00000517824	PTPRF	P10586	1907 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	PITPNM2	Q9BZ72	1349 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824		E9PMD0	336 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	KIF5C	O60282	957 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	CTNND1	O60716	968 aa	Known RBP	11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	ZBED4	O75132	1171 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	ICAM1	P05362	532 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	KRT9	P35527	623 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	PBX1	P40424	430 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	TBC1D8B	Q0IIM8	1120 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	STK4	Q13043	487 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	MAN2A1	Q16706	1144 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	ANKRD40	Q6AI12	368 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	STXBP4	Q6ZWJ1	553 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	APTX	Q7Z2E3	356 aa	Known RBP	11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	KIAA0895	Q8NCT3	520 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	ETNPPL	Q8TBG4	499 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	ZBED3	Q96IU2	234 aa	Predicted RBP	11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	ABHD10	Q9NUJ1	306 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	TLL2	Q9Y6L7	1015 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	OTOF	Q9HC10	1997 aa		11.94	□□□□□ -0.5
SPIDR-204	ENST00000517824	THSD7B	Q9C0I4	1608 aa		11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	LOC285556	D6RIA3	1793 aa		11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	MSH4	O15457	936 aa		11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	CHMP2A	O43633	222 aa		11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	FLOT1	O75955	427 aa		11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	FAM13A	O94988	1023 aa		11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	SLU7	O95391	586 aa	Known RBP	11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	GNA14	O95837	355 aa		11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	GYPC	P04921	128 aa		11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	TAL1	P17542	331 aa	Predicted RBP	11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	GAP43	P17677	238 aa		11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	RPA1	P27694	616 aa		11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	CYLC1	P35663	651 aa	Predicted RBP	11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	PMS1	P54277	932 aa	Known RBP	11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	GNG11	P61952	73 aa		11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	ETF1	P62495	437 aa	Known RBP	11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	SYCP1	Q15431	976 aa		11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	PRPF38A	Q8NAV1	312 aa	Known RBP	11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	NEK9	Q8TD19	979 aa		11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	LRRC15	Q8TF66	581 aa		11.93	□□□□□ -0.5
SPIDR-204	ENST00000517824	GJA10	Q969M2	543 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 280.5 ms