RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 LENG9Q96B70 501 aa0.71□□□□□ -2.3
SNORA40.17-201ENST00000517256 PGBD4Q96DM1 585 aa0.71□□□□□ -2.3
SNORA40.17-201ENST00000517256 THOC3Q96J01 351 aaKnown RBP0.71□□□□□ -2.3
SNORA40.17-201ENST00000517256 ZNF48Q96MX3 618 aaPredicted RBP0.71□□□□□ -2.3
SNORA40.17-201ENST00000517256 UCN2Q96RP3 112 aa0.71□□□□□ -2.3
SNORA40.17-201ENST00000517256 CARD11Q9BXL7 1154 aa0.71□□□□□ -2.3
SNORA40.17-201ENST00000517256 GPR87Q9BY21 358 aa0.71□□□□□ -2.3
SNORA40.17-201ENST00000517256 ALOXE3Q9BYJ1 711 aa0.71□□□□□ -2.3
SNORA40.17-201ENST00000517256 PRDM13Q9H4Q3 707 aa0.71□□□□□ -2.3
SNORA40.17-201ENST00000517256 BTG4Q9NY30 223 aa0.71□□□□□ -2.3
SNORA40.17-201ENST00000517256 FZD1Q9UP38 647 aa0.71□□□□□ -2.3
SNORA40.17-201ENST00000517256 MAFBQ9Y5Q3 323 aaPredicted RBP0.71□□□□□ -2.3
SNORA40.17-201ENST00000517256 MMP24Q9Y5R2 645 aa0.71□□□□□ -2.3
SNORA40.17-201ENST00000517256 SIGLEC6O43699 453 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 MATN4O95460 622 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 FUCA1P04066 466 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 NTRK1P04629 796 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 ZNF888P0CJ79 500 aaPredicted RBP0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 PDE6AP16499 860 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 LAG3P18627 525 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 LMOD1P29536 600 aaPredicted RBP0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 CSF2RBP32927 897 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 NOP2P46087 812 aaKnown RBP0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 CDK8P49336 464 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 SCNN1GP51170 649 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 KRTAP10-3P60369 221 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 SNW1Q13573 536 aaKnown RBP0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 SEMA3AQ14563 771 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 RNF151Q2KHN1 245 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 CDCA8Q53HL2 280 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 PCNX4Q63HM2 1172 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 PI16Q6UXB8 463 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 Q6YL49 198 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 NR2C2APQ86WQ0 139 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 CPT1CQ8TCG5 803 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 NSMCE1Q8WV22 266 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 ACSF2Q96CM8 615 aaPredicted RBP0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 HMCESQ96FZ2 354 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 KIF2CQ99661 725 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 TRMOQ9BU70 441 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 WDR11Q9BZH6 1224 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 MKRN2Q9H000 416 aaKnown RBP0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 GFOD1Q9NXC2 390 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 CXXC1Q9P0U4 656 aaPredicted RBP0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 ANKFY1Q9P2R3 1169 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 NOVA2Q9UNW9 492 aaKnown RBP0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 PTPN22Q9Y2R2 807 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 PCDHAC2Q9Y5I4 1007 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 CORINQ9Y5Q5 1042 aa0.7□□□□□ -2.3
SNORA40.17-201ENST00000517256 ZNF804BA4D1E1 1349 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 ZNF185O15231 689 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 TP73O15350 636 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 SMAD6O43541 496 aaKnown RBP0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 SOCS5O75159 536 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 PAGE1O75459 146 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 RECQL4O94761 1208 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 SNRPB2P08579 225 aaKnown RBP0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 T-ENOLP0DO92 83 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 HKR1P10072 659 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 CKBP12277 381 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 GLRBP48167 497 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 NOVP48745 357 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 ZNF134P52741 427 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 NPEPPSP55786 919 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 SSBP2P81877 361 aaPredicted RBP0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 HOXA4Q00056 320 aaPredicted RBP0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 PTPN11Q06124 597 aaPredicted RBP0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 SF3B4Q15427 424 aaKnown RBP eCLIP0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 SMAD2Q15796 467 aaKnown RBP0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 PLEKHG4Q58EX7 1191 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 RABL3Q5HYI8 236 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 NBPF12Q5TAG4 269 aaPredicted RBP0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 Q6ZRM9 215 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 REXO1L1PQ8IX06 675 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 FAM126BQ8IXS8 530 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 SH2D3CQ8N5H7 860 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 RETREG2Q8NC44 543 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 TMEM52Q8NDY8 209 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 HELQQ8TDG4 1101 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 TOE1Q96GM8 510 aaKnown RBP0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 BHMT2Q9H2M3 363 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 NELFAQ9H3P2 528 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 GP6Q9HCN6 339 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 GULP1Q9UBP9 304 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 SEPT3Q9UH03 358 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 ADAM30Q9UKF2 790 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 FAM184BQ9ULE4 1060 aa0.69□□□□□ -2.3
SNORA40.17-201ENST00000517256 SETD1BQ9UPS6 1966 aaKnown RBP0.68□□□□□ -2.3
SNORA40.17-201ENST00000517256 ACIN1Q9UKV3 1341 aaKnown RBP0.68□□□□□ -2.3
SNORA40.17-201ENST00000517256 A0A1W2PNU3 283 aaPredicted RBP0.68□□□□□ -2.3
SNORA40.17-201ENST00000517256 POM121CA8CG34 1229 aa0.68□□□□□ -2.3
SNORA40.17-201ENST00000517256 GOLGA6L6A8MZA4 724 aa0.68□□□□□ -2.3
SNORA40.17-201ENST00000517256 NTN3O00634 580 aaPredicted RBP0.68□□□□□ -2.3
SNORA40.17-201ENST00000517256 MYO1BO43795 1136 aa0.68□□□□□ -2.3
SNORA40.17-201ENST00000517256 BPNT1O95861 308 aa0.68□□□□□ -2.3
SNORA40.17-201ENST00000517256 SERPINB2P05120 415 aa0.68□□□□□ -2.3
SNORA40.17-201ENST00000517256 GSNP06396 782 aa0.68□□□□□ -2.3
SNORA40.17-201ENST00000517256 CD3EP07766 207 aa0.68□□□□□ -2.3
SNORA40.17-201ENST00000517256 RAG1P15918 1043 aa0.68□□□□□ -2.3
SNORA40.17-201ENST00000517256 ZEB1P37275 1124 aaPredicted RBP0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms