RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 KRT18P05783 430 aaKnown RBP10.6□□□□□ -0.71
TPM3-222ENST00000515609 CDC25AP30304 524 aa10.6□□□□□ -0.71
TPM3-222ENST00000515609 MAPK4P31152 587 aa10.6□□□□□ -0.71
TPM3-222ENST00000515609 ZNF157P51786 506 aaPredicted RBP10.6□□□□□ -0.71
TPM3-222ENST00000515609 ERVK-9P63128 1117 aa10.6□□□□□ -0.71
TPM3-222ENST00000515609 ERVK-24P63145 666 aa10.6□□□□□ -0.71
TPM3-222ENST00000515609 ASIC1P78348 528 aa10.6□□□□□ -0.71
TPM3-222ENST00000515609 GRB10Q13322 594 aa10.6□□□□□ -0.71
TPM3-222ENST00000515609 TMEM119Q4V9L6 283 aa10.6□□□□□ -0.71
TPM3-222ENST00000515609 ZNF746Q6NUN9 644 aaPredicted RBP10.6□□□□□ -0.71
TPM3-222ENST00000515609 CCDC65Q8IXS2 484 aa10.6□□□□□ -0.71
TPM3-222ENST00000515609 ZNF526Q8TF50 670 aaPredicted RBP10.6□□□□□ -0.71
TPM3-222ENST00000515609 MS4A4AQ96JQ5 239 aa10.6□□□□□ -0.71
TPM3-222ENST00000515609 CCDC43Q96MW1 224 aaKnown RBP10.6□□□□□ -0.71
TPM3-222ENST00000515609 INPP4AQ96PE3 977 aaPredicted RBP10.6□□□□□ -0.71
TPM3-222ENST00000515609 MMP19Q99542 508 aa10.6□□□□□ -0.71
TPM3-222ENST00000515609 MMTAG2Q9BU76 263 aaKnown RBP10.6□□□□□ -0.71
TPM3-222ENST00000515609 CBX8Q9HC52 389 aa10.6□□□□□ -0.71
TPM3-222ENST00000515609 MORF4L1Q9UBU8 362 aa10.6□□□□□ -0.71
TPM3-222ENST00000515609 MAN1B1Q9UKM7 699 aa10.6□□□□□ -0.71
TPM3-222ENST00000515609 KIAA1024Q9UPX6 916 aa10.6□□□□□ -0.71
TPM3-222ENST00000515609 RIPK3Q9Y572 518 aa10.6□□□□□ -0.71
TPM3-222ENST00000515609 NFASCO94856 1347 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 A0A0G2JMZ2 1700 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 RLFQ13129 1914 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 BICDL2A1A5D9 508 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 PP2D1A8MPX8 630 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 WDR64B1ANS9 1081 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 CBFA2T2O43439 604 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 RHOBTB3O94955 611 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 FGFR1OPO95684 399 aaKnown RBP10.59□□□□□ -0.71
TPM3-222ENST00000515609 P4HBP07237 508 aaKnown RBP10.59□□□□□ -0.71
TPM3-222ENST00000515609 ITGB5P18084 799 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 ERCC3P19447 782 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 UBXN2AP68543 259 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 SPIRE1Q08AE8 756 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 MOGSQ13724 837 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 TPD52L1Q16890 204 aaPredicted RBP10.59□□□□□ -0.71
TPM3-222ENST00000515609 DPCR1Q3MIW9 517 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 RGMBQ6NW40 437 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 STXBP4Q6ZWJ1 553 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 MIER3Q7Z3K6 550 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 SENP7Q9BQF6 1050 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 EIF2AK1Q9BQI3 630 aaKnown RBP10.59□□□□□ -0.71
TPM3-222ENST00000515609 TIPINQ9BVW5 301 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 TRIM9Q9C026 710 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 ZSWIM4Q9H7M6 989 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 AGO4Q9HCK5 861 aaKnown RBP10.59□□□□□ -0.71
TPM3-222ENST00000515609 BTBD7Q9P203 1132 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 COL20A1Q9P218 1284 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 RBPJLQ9UBG7 517 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 KCNG1Q9UIX4 513 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 VAV3Q9UKW4 847 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 SAMM50Q9Y512 469 aa10.59□□□□□ -0.71
TPM3-222ENST00000515609 GOLGB1Q14789 3259 aaKnown RBP10.58□□□□□ -0.72
TPM3-222ENST00000515609 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.58□□□□□ -0.72
TPM3-222ENST00000515609 BTBD19C9JJ37 291 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 EYA4O95677 639 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 ALDH1A1P00352 501 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 PLA2G4BP0C869 781 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 PRKCSHP14314 528 aaPredicted RBP10.58□□□□□ -0.72
TPM3-222ENST00000515609 GAP43P17677 238 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 ICAM3P32942 547 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 GJA5P36382 358 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 ALDH5A1P51649 535 aaPredicted RBP10.58□□□□□ -0.72
TPM3-222ENST00000515609 MRPS9P82933 396 aaKnown RBP10.58□□□□□ -0.72
TPM3-222ENST00000515609 PLCB2Q00722 1185 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 SPAG1Q07617 926 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 NEDD9Q14511 834 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 FAM110CQ1W6H9 321 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 COBLL1Q53SF7 1204 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 NAALADL2Q58DX5 795 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 WDR78Q5VTH9 848 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 CST9Q5W186 159 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 SARM1Q6SZW1 724 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 UNC13DQ70J99 1090 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 OTUD6AQ7L8S5 288 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.58□□□□□ -0.72
TPM3-222ENST00000515609 LUZP1Q86V48 1076 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 CATSPER3Q86XQ3 398 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 CYP2W1Q8TAV3 490 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 ENOX1Q8TC92 643 aaKnown RBP10.58□□□□□ -0.72
TPM3-222ENST00000515609 NOC3LQ8WTT2 800 aaKnown RBP10.58□□□□□ -0.72
TPM3-222ENST00000515609 BRI3BPQ8WY22 251 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 ATP6V0A1Q93050 837 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 DHTKD1Q96HY7 919 aaPredicted RBP10.58□□□□□ -0.72
TPM3-222ENST00000515609 CTAGE1Q96RT6 745 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 HSD17B14Q9BPX1 270 aa10.58□□□□□ -0.72
TPM3-222ENST00000515609 TRPM7Q96QT4 1865 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 SPATA31C2B4DYI2 1134 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 TBCAO75347 108 aaKnown RBP10.57□□□□□ -0.72
TPM3-222ENST00000515609 TOMM70O94826 608 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 LYPLA2O95372 231 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 SSBP05455 408 aaKnown RBP eCLIP10.57□□□□□ -0.72
TPM3-222ENST00000515609 PSAPP07602 524 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 TPM2P07951 284 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 ARP10275 920 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 CDK11BP21127 795 aaKnown RBP10.57□□□□□ -0.72
TPM3-222ENST00000515609 ABCD1P33897 745 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 QARSP47897 775 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms