RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 PARVGQ9HBI0 331 aa15.68■□□□□ 0.1
TRIO-222ENST00000515144 GCNT4Q9P109 453 aa15.68■□□□□ 0.1
TRIO-222ENST00000515144 PRPF31Q8WWY3 499 aaKnown RBP15.68■□□□□ 0.1
TRIO-222ENST00000515144 FANCLQ9NW38 375 aa15.68■□□□□ 0.1
TRIO-222ENST00000515144 GGA3Q9NZ52 723 aa15.68■□□□□ 0.1
TRIO-222ENST00000515144 PLA2G4BP0C869 781 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 KIF11P52732 1056 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 ZNF131P52739 623 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 RPS6KA2Q15349 733 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 SAMD7Q7Z3H4 446 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 TMEM260Q9NX78 707 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 PLA2R1Q13018 1463 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 CPSF1Q10570 1443 aaKnown RBP15.67■□□□□ 0.1
TRIO-222ENST00000515144 ZNF75DP51815 510 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 SLC12A1Q13621 1099 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 RASEFQ8IZ41 740 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 CARD6Q9BX69 1037 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 KIF24Q5T7B8 1368 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 N4BP1O75113 896 aaKnown RBP15.67■□□□□ 0.1
TRIO-222ENST00000515144 SWSAP1Q6NVH7 229 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 PDCD6IPQ8WUM4 868 aaKnown RBP15.67■□□□□ 0.1
TRIO-222ENST00000515144 CCDC68Q9H2F9 335 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 PSMD14O00487 310 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 RASSF7Q02833 373 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 PASD1Q8IV76 773 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 ARHGAP31Q2M1Z3 1444 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 SH2B2O14492 632 aaPredicted RBP15.67■□□□□ 0.1
TRIO-222ENST00000515144 CAPN2P17655 700 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 DENND2CQ68D51 928 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 FAM186BQ8IYM0 893 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 ADGRF4Q8IZF3 695 aa15.67■□□□□ 0.1
TRIO-222ENST00000515144 CYP2B6P20813 491 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 MYLK4Q86YV6 388 aaPredicted RBP15.66■□□□□ 0.1
TRIO-222ENST00000515144 NT5C1BQ96P26 610 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 RNF146Q9NTX7 359 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 NSFP46459 744 aaKnown RBP15.66■□□□□ 0.1
TRIO-222ENST00000515144 ARHGAP4P98171 946 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 TTLL4Q14679 1199 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 INTS8Q75QN2 995 aaKnown RBP15.66■□□□□ 0.1
TRIO-222ENST00000515144 PODNQ7Z5L7 613 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 GLYCTKQ8IVS8 523 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 KRIT1O00522 736 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 TFRCP02786 760 aaKnown RBP15.66■□□□□ 0.1
TRIO-222ENST00000515144 CTSHP09668 335 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 ATP5DP30049 168 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 CACNB2Q08289 660 aaPredicted RBP15.66■□□□□ 0.1
TRIO-222ENST00000515144 VPS72Q15906 364 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 SDCCAG8Q86SQ7 713 aaPredicted RBP15.66■□□□□ 0.1
TRIO-222ENST00000515144 GDAP1Q8TB36 358 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 MYO9BQ13459 2157 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 MROH7-TTC4A0A0A0MT08 1334 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 F5H423 210 aaPredicted RBP15.66■□□□□ 0.1
TRIO-222ENST00000515144 IFT20Q8IY31 132 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 PREX1Q8TCU6 1659 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 NUCKS1Q9H1E3 243 aaKnown RBP15.66■□□□□ 0.1
TRIO-222ENST00000515144 RRAGCQ9HB90 399 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 SAMD15Q9P1V8 674 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 GFPT2O94808 682 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 KCTD6Q8NC69 237 aa15.66■□□□□ 0.1
TRIO-222ENST00000515144 DPEP1P16444 411 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 GKAP1Q5VSY0 366 aaPredicted RBP15.65■□□□□ 0.1
TRIO-222ENST00000515144 KRBA2Q6ZNG9 492 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 ANKRD13CQ8N6S4 541 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 CALN1Q9BXU9 219 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 RNF26Q9BY78 433 aaPredicted RBP15.65■□□□□ 0.1
TRIO-222ENST00000515144 TSR3Q9UJK0 312 aaKnown RBP15.65■□□□□ 0.1
TRIO-222ENST00000515144 TACC3Q9Y6A5 838 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 COPB2P35606 906 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 CFAP221Q4G0U5 840 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 MUM1L1Q5H9M0 696 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 SIX6OS1Q8N1H7 587 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 ZNF148Q9UQR1 794 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 HAUS1Q96CS2 278 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.65■□□□□ 0.1
TRIO-222ENST00000515144 GRIN3BO60391 1043 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 SARNPP82979 210 aaKnown RBP15.65■□□□□ 0.1
TRIO-222ENST00000515144 SEPT6Q14141 434 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 AFAP1L2Q8N4X5 818 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 SPATA31A1Q5TZJ5 1347 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 MFAP3P55082 362 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 CYB5R4Q7L1T6 521 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 FOXP1Q9H334 677 aaPredicted RBP15.65■□□□□ 0.1
TRIO-222ENST00000515144 PCDHB6Q9Y5E3 794 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 IGKV5-2P06315 115 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 ZNF568Q3ZCX4 644 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 HHATQ5VTY9 493 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 ANKRD42Q8N9B4 389 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 SH2D3AQ9BRG2 576 aa15.65■□□□□ 0.1
TRIO-222ENST00000515144 POLR2BP30876 1174 aaKnown RBP15.64■□□□□ 0.09
TRIO-222ENST00000515144 HUNKP57058 714 aa15.64■□□□□ 0.09
TRIO-222ENST00000515144 FASTKD5Q7L8L6 764 aaKnown RBP15.64■□□□□ 0.09
TRIO-222ENST00000515144 MMP1P03956 469 aa15.64■□□□□ 0.09
TRIO-222ENST00000515144 ADRA2BP18089 450 aa15.64■□□□□ 0.09
TRIO-222ENST00000515144 STAT3P40763 770 aa15.64■□□□□ 0.09
TRIO-222ENST00000515144 CCDC121Q6ZUS5 278 aa15.64■□□□□ 0.09
TRIO-222ENST00000515144 THEM5Q8N1Q8 247 aa15.64■□□□□ 0.09
TRIO-222ENST00000515144 ATP2A3Q93084 1043 aa15.64■□□□□ 0.09
TRIO-222ENST00000515144 TRIM56Q9BRZ2 755 aaKnown RBP15.64■□□□□ 0.09
TRIO-222ENST00000515144 DPH5Q9H2P9 285 aa15.64■□□□□ 0.09
TRIO-222ENST00000515144 PIK3R2O00459 728 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms