RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 JMJD6Q6NYC1 403 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC11-209ENST00000512476 REC114Q7Z4M0 266 aa7.09□□□□□ -1.27
TRAPPC11-209ENST00000512476 SAPCD2Q86UD0 394 aa7.09□□□□□ -1.27
TRAPPC11-209ENST00000512476 LRRC47Q8N1G4 583 aaKnown RBP7.09□□□□□ -1.27
TRAPPC11-209ENST00000512476 ZNF669Q96BR6 464 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC11-209ENST00000512476 ZNF396Q96N95 335 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC11-209ENST00000512476 FAM210AQ96ND0 272 aa7.09□□□□□ -1.27
TRAPPC11-209ENST00000512476 FAM193BQ96PV7 902 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC11-209ENST00000512476 RWDD1Q9H446 243 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC11-209ENST00000512476 TRPV4Q9HBA0 871 aa7.09□□□□□ -1.27
TRAPPC11-209ENST00000512476 RAB6BQ9NRW1 208 aa7.09□□□□□ -1.27
TRAPPC11-209ENST00000512476 FAM86C1Q9NVL1 165 aa7.09□□□□□ -1.27
TRAPPC11-209ENST00000512476 UTP6Q9NYH9 597 aaKnown RBP7.09□□□□□ -1.27
TRAPPC11-209ENST00000512476 CORO2BQ9UQ03 480 aa7.09□□□□□ -1.27
TRAPPC11-209ENST00000512476 TRBV23-1A0A0A0MS06 115 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 BLACEA4D250 179 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 PGPEP1LA6NFU8 196 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 DDX3XO00571 662 aaKnown RBP eCLIP7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 USO1O60763 962 aaKnown RBP7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 ACRP10323 421 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 YBEYP58557 167 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 PPARDQ03181 441 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 HSP90B2PQ58FF3 399 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 RPUSD3Q6P087 351 aaKnown RBP7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 ALKBH5Q6P6C2 394 aaKnown RBP7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 TBC1D21Q8IYX1 336 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 C2orf69Q8N8R5 385 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 CHST13Q8NET6 341 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 IL17RDQ8NFM7 739 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 FNIP1Q8TF40 1166 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 USP13Q92995 863 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 OSBPL3Q9H4L5 887 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 SEPT9Q9UHD8 586 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 CCNB3Q8WWL7 1395 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 PTPRGP23470 1445 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 SUPT6HQ7KZ85 1726 aaKnown RBP7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 C2orf81A6NN90 581 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 G3V3G9 751 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 TBX1O43435 398 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 DDX58O95786 925 aaKnown RBP7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 MX2P20592 715 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 PEX2P28328 305 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 MAPK4P31152 587 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 NLRP5P59047 1200 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 KLF1Q13351 362 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 SCARB2Q14108 478 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 RASA2Q15283 850 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 TTBK2Q6IQ55 1244 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 SLC30A6Q6NXT4 461 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 ABHD17CQ6PCB6 329 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 RAB11FIP4Q86YS3 637 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 CCDC170Q8IYT3 715 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 KIF1BPQ96EK5 621 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 NLRP3Q96P20 1036 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 BAG1Q99933 345 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 MENTQ9BUN1 341 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 RABEP2Q9H5N1 569 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 DMRT3Q9NQL9 472 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 EVA1BQ9NVM1 165 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 SRPK3Q9UPE1 567 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 ZNF711Q9Y462 761 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 MTF2Q9Y483 593 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 ARHGEF11O15085 1522 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 NCOA2Q15596 1464 aa7.08□□□□□ -1.28
TRAPPC11-209ENST00000512476 H7C0S8 307 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 NUDT7P0C024 238 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 TIE1P35590 1138 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 MAPK10P53779 464 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 RRP1P56182 461 aaKnown RBP7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 SLC7A5Q01650 507 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 PDE3AQ14432 1141 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 ATP2B3Q16720 1220 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 CFAP100Q494V2 611 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 BTNL9Q6UXG8 535 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 AGMOQ6ZNB7 445 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 SLC9B2Q86UD5 537 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 CLRN3Q8NCR9 226 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 DIS3LQ8TF46 1054 aaKnown RBP7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 ZDHHC1Q8WTX9 485 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 ZNF606Q8WXB4 792 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 GSDMAQ96QA5 445 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 DEF6Q9H4E7 631 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 TMOD4Q9NZQ9 345 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 EML1O00423 815 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 SLC27A2O14975 620 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 SKAP2O75563 359 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 CLCN2P51788 898 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 CYP4A11Q02928 519 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 TAF12Q16514 161 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 C11orf91Q3C1V1 193 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 NBPF14Q5TI25 921 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 PEAR1Q5VY43 1037 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 PTCRAQ6ISU1 281 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 ANKRD49Q8WVL7 239 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 AHCYL2Q96HN2 611 aaKnown RBP7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 TMEM237Q96Q45 408 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 OXCT2Q9BYC2 517 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 RNF38Q9H0F5 515 aa7.07□□□□□ -1.28
TRAPPC11-209ENST00000512476 GHITMQ9H3K2 345 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms