RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 ZBED6P86452 979 aa15.61■□□□□ 0.09
TRIO-218ENST00000512070 PCDHA7Q9UN72 937 aa15.61■□□□□ 0.09
TRIO-218ENST00000512070 TMCO4Q5TGY1 634 aa15.61■□□□□ 0.09
TRIO-218ENST00000512070 RSRC2Q7L4I2 434 aaKnown RBP15.61■□□□□ 0.09
TRIO-218ENST00000512070 ZNF653Q96CK0 615 aa15.61■□□□□ 0.09
TRIO-218ENST00000512070 COPG1Q9Y678 874 aaKnown RBP15.61■□□□□ 0.09
TRIO-218ENST00000512070 ABCC4O15439 1325 aa15.61■□□□□ 0.09
TRIO-218ENST00000512070 LRRC43Q8N309 656 aa15.61■□□□□ 0.09
TRIO-218ENST00000512070 MXD3Q9BW11 206 aa15.61■□□□□ 0.09
TRIO-218ENST00000512070 EDEM3Q9BZQ6 932 aa15.61■□□□□ 0.09
TRIO-218ENST00000512070 MAP3K19Q56UN5 1328 aa15.61■□□□□ 0.09
TRIO-218ENST00000512070 IFRD2Q12894 506 aaPredicted RBP15.6■□□□□ 0.09
TRIO-218ENST00000512070 DNAJC24Q6P3W2 148 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 ARMCX2Q7L311 632 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.6■□□□□ 0.091e-6■■■□□ 18.7
TRIO-218ENST00000512070 TNNQ9UQP3 1299 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 ATP8A1Q9Y2Q0 1164 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 NDUFA8P51970 172 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 KCTD6Q8NC69 237 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 KRT82Q9NSB4 513 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 KRT8P05787 483 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 IFNL3Q8IZI9 196 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 TTC13Q8NBP0 860 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 MIF4GDA9UHW6 222 aaKnown RBP15.6■□□□□ 0.09
TRIO-218ENST00000512070 SEC24BO95487 1268 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 P2RX5Q93086 422 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 CCDC87Q9NVE4 849 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 CEP170Q5SW79 1584 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 SYCE1LA8MT33 242 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 TMEM232C9JQI7 657 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 KRT38O76015 456 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 TRIML2Q8N7C3 387 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 PHACTR3Q96KR7 559 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 MYH10P35580 1976 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 MAGEA9P43362 315 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 CCNA1P78396 465 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 SSH3Q8TE77 659 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 SLC38A10Q9HBR0 1119 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 STK32BQ9NY57 414 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 LRRIQ4A6NIV6 560 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 SNX25Q9H3E2 840 aa15.6■□□□□ 0.09
TRIO-218ENST00000512070 NEURL1BA8MQ27 555 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 SAT1P21673 171 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 DR1Q01658 176 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 DHX9Q08211 1270 aaKnown RBP15.59■□□□□ 0.09
TRIO-218ENST00000512070 KIF22Q14807 665 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 ARL6IP4Q66PJ3 421 aaKnown RBP15.59■□□□□ 0.09
TRIO-218ENST00000512070 C16orf87Q6PH81 154 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 RDH13Q8NBN7 331 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 C8orf37Q96NL8 207 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 RPAP1Q9BWH6 1393 aaPredicted RBP15.59■□□□□ 0.09
TRIO-218ENST00000512070 PGBD1Q96JS3 809 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 MTMR6Q9Y217 621 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 ATP7AQ04656 1500 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 MESDQ14696 234 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 N4BP2L2Q92802 583 aaPredicted RBP15.59■□□□□ 0.09
TRIO-218ENST00000512070 TRIM55Q9BYV6 548 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 MAGEB5Q9BZ81 275 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 CIAO1O76071 339 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 SMARCA1P28370 1054 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 NEK2P51955 445 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 CERKLQ49MI3 558 aaPredicted RBP15.59■□□□□ 0.09
TRIO-218ENST00000512070 C17orf53Q8N3J3 647 aaPredicted RBP15.59■□□□□ 0.09
TRIO-218ENST00000512070 USP28Q96RU2 1077 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 KLC2Q9H0B6 622 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 PRDM1O75626 825 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 OCRLQ01968 901 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 SCG3Q8WXD2 468 aaKnown RBP15.59■□□□□ 0.09
TRIO-218ENST00000512070 KIF1CO43896 1103 aaKnown RBP15.59■□□□□ 0.09
TRIO-218ENST00000512070 TMED1Q13445 227 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 TBCCQ15814 346 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 PROM2Q8N271 834 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 ING2Q9H160 280 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 AP2B1P63010 937 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 KCTD16Q68DU8 428 aa15.59■□□□□ 0.09
TRIO-218ENST00000512070 SPDYE1Q8NFV5 336 aaPredicted RBP15.59■□□□□ 0.09
TRIO-218ENST00000512070 CASP14P31944 242 aa15.58■□□□□ 0.09
TRIO-218ENST00000512070 SLFNL1Q499Z3 407 aa15.58■□□□□ 0.09
TRIO-218ENST00000512070 DEPDC1BQ8WUY9 529 aa15.58■□□□□ 0.09
TRIO-218ENST00000512070 GPR108Q9NPR9 543 aa15.58■□□□□ 0.09
TRIO-218ENST00000512070 MORF4L2Q15014 288 aa15.58■□□□□ 0.09
TRIO-218ENST00000512070 MORC4Q8TE76 937 aa15.58■□□□□ 0.09
TRIO-218ENST00000512070 PRPSAP2O60256 369 aa15.58■□□□□ 0.08
TRIO-218ENST00000512070 ACAD11Q709F0 780 aa15.58■□□□□ 0.08
TRIO-218ENST00000512070 PLA2G4DQ86XP0 818 aa15.58■□□□□ 0.08
TRIO-218ENST00000512070 DNAJC17Q9NVM6 304 aaKnown RBP15.58■□□□□ 0.08
TRIO-218ENST00000512070 SATB2Q9UPW6 733 aa15.58■□□□□ 0.08
TRIO-218ENST00000512070 TNKSO95271 1327 aa15.58■□□□□ 0.08
TRIO-218ENST00000512070 CFAP73A6NFT4 308 aa15.58■□□□□ 0.08
TRIO-218ENST00000512070 CREB3O43889 395 aa15.58■□□□□ 0.08
TRIO-218ENST00000512070 TMED2Q15363 201 aa15.58■□□□□ 0.08
TRIO-218ENST00000512070 PCDHA4Q9UN74 947 aa15.58■□□□□ 0.08
TRIO-218ENST00000512070 KPNA7A9QM74 516 aa15.58■□□□□ 0.08
TRIO-218ENST00000512070 CHUKO15111 745 aa15.58■□□□□ 0.08
TRIO-218ENST00000512070 SLFN12LQ6IEE8 588 aa15.58■□□□□ 0.08
TRIO-218ENST00000512070 MIS18BP1Q6P0N0 1132 aa15.58■□□□□ 0.08
TRIO-218ENST00000512070 TTC39CQ8N584 583 aa15.58■□□□□ 0.08
TRIO-218ENST00000512070 HNRNPRO43390 633 aaKnown RBP15.58■□□□□ 0.08
TRIO-218ENST00000512070 PAPOLAP51003 745 aaKnown RBP15.58■□□□□ 0.08
TRIO-218ENST00000512070 MMS22LQ6ZRQ5 1243 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms