RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 PHLDB2Q86SQ0 1253 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 PIGOQ8TEQ8 1089 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 PPP1R13BQ96KQ4 1090 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 SNX25Q9H3E2 840 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 UBE2TQ9NPD8 197 aaPredicted RBP9.86□□□□□ -0.83
NEK1-207ENST00000511633 LRFN2Q9ULH4 789 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 ZNF148Q9UQR1 794 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 AFG3L2Q9Y4W6 797 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 BZW2Q9Y6E2 419 aaKnown RBP9.86□□□□□ -0.83
NEK1-207ENST00000511633 USP17L15C9J2P7 530 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 USP17L13C9JLJ4 530 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 USP17L11C9JVI0 530 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 USP17L18D6R9N7 530 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 USP17L22D6RA61 530 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 USP17L17D6RBQ6 530 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 USP17L19D6RCP7 530 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 USP17L20D6RJB6 530 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 TCP1P17987 556 aaKnown RBP9.86□□□□□ -0.83
NEK1-207ENST00000511633 ETF1P62495 437 aaKnown RBP9.86□□□□□ -0.83
NEK1-207ENST00000511633 RNASELQ05823 741 aaKnown RBP9.86□□□□□ -0.83
NEK1-207ENST00000511633 USP17L24Q0WX57 530 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 GKAP1Q5VSY0 366 aaPredicted RBP9.86□□□□□ -0.83
NEK1-207ENST00000511633 USP17L6PQ6QN14 398 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 SRGAP1Q7Z6B7 1085 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 AFAP1L2Q8N4X5 818 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.86□□□□□ -0.83
NEK1-207ENST00000511633 ZNF653Q96CK0 615 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 HAUS1Q96CS2 278 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 GOLGA8SH3BPF8 625 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 MYO1FO00160 1098 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 PPFIA1Q13136 1202 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 B4GALNT4Q76KP1 1039 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 RFX6Q8HWS3 928 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 NLRP4Q96MN2 994 aa9.86□□□□□ -0.83
NEK1-207ENST00000511633 E9PCH4 1651 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 H7C0C1 242 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 MYL1P05976 194 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 ZSCAN20P17040 1043 aaPredicted RBP9.85□□□□□ -0.83
NEK1-207ENST00000511633 CD58P19256 250 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 ATP5OP48047 213 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 PDZD4Q76G19 769 aaPredicted RBP9.85□□□□□ -0.83
NEK1-207ENST00000511633 USP31Q70CQ4 1352 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 ATF2P15336 505 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 CDC25BP30305 580 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 ARHGEF6Q15052 776 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 PFKFB3Q16875 520 aaPredicted RBP9.85□□□□□ -0.83
NEK1-207ENST00000511633 C7orf31Q8N865 590 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 OXER1Q8TDS5 423 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 P3H4Q92791 437 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 LY9Q9HBG7 655 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 ABCB11O95342 1321 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 C1orf167Q5SNV9 1468 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 CAMSAP1Q5T5Y3 1602 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 POTEMA6NI47 508 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 SPDYE16A6NNV3 312 aaPredicted RBP9.85□□□□□ -0.83
NEK1-207ENST00000511633 CHRNA5P30532 468 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 ARPP19P56211 112 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 BIRC2Q13490 618 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 SCARF1Q14162 830 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 SPDYE2Q495Y8 402 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 SCARA5Q6ZMJ2 495 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 SPATA24Q86W54 205 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 KSR1Q8IVT5 923 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 EXOC8Q8IYI6 725 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 SLC35F6Q8N357 371 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 BANK1Q8NDB2 785 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 CACTINQ8WUQ7 758 aaKnown RBP9.85□□□□□ -0.83
NEK1-207ENST00000511633 FAM149B1Q96BN6 582 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 FAM84BQ96KN1 310 aaPredicted RBP9.85□□□□□ -0.83
NEK1-207ENST00000511633 TMEM260Q9NX78 707 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 MTMR1Q13613 665 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 SNRNP48Q6IEG0 339 aaKnown RBP9.85□□□□□ -0.83
NEK1-207ENST00000511633 VSIG1Q86XK7 387 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 C10orf67Q8IYJ2 551 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 ATP2A3Q93084 1043 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 PLEKHG2Q9H7P9 1386 aa9.85□□□□□ -0.83
NEK1-207ENST00000511633 CCNE1P24864 410 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 MAPK4P31152 587 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 PHBP35232 272 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 PEX3P56589 373 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 AP3B2Q13367 1082 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 ARL6IP4Q66PJ3 421 aaKnown RBP9.84□□□□□ -0.83
NEK1-207ENST00000511633 RINT1Q6NUQ1 792 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 CCDC13Q8IYE1 715 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 RMDN3Q96TC7 470 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 FAM49AQ9H0Q0 323 aaPredicted RBP9.84□□□□□ -0.83
NEK1-207ENST00000511633 BCL2L12Q9HB09 334 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 RNF181Q9P0P0 153 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 PNMA3Q9UL41 463 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 PSMD2Q13200 908 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 CUL4BQ13620 913 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 LLGL1Q15334 1064 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 RSRC2Q7L4I2 434 aaKnown RBP9.84□□□□□ -0.83
NEK1-207ENST00000511633 SDCCAG8Q86SQ7 713 aaPredicted RBP9.84□□□□□ -0.83
NEK1-207ENST00000511633 METTL23Q86XA0 190 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 FEM1BQ9UK73 627 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 MYL3P08590 195 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 SAT1P21673 171 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 STX2P32856 288 aa9.84□□□□□ -0.83
NEK1-207ENST00000511633 KIF11P52732 1056 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms