RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 ZNF34Q8IZ26 560 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 VGLL2Q8N8G2 317 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 TCP11Q8WWU5 503 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 SYF2O95926 243 aaKnown RBP16.3■□□□□ 0.2
USP38-202ENST00000510377 DENND2CQ68D51 928 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 MARCH10Q8NA82 808 aaPredicted RBP16.3■□□□□ 0.2
USP38-202ENST00000510377 EMILIN3Q9NT22 766 aa16.3■□□□□ 0.2
USP38-202ENST00000510377 A0A1W2PRG0 241 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 ANKRD62A6NC57 917 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 CCDC172P0C7W6 258 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 ADCY1Q08828 1119 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 CLEC10AQ8IUN9 316 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 BSDC1Q9NW68 430 aaPredicted RBP16.29■□□□□ 0.2
USP38-202ENST00000510377 ARHGAP20Q9P2F6 1191 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 STK17AQ9UEE5 414 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 CD2APQ9Y5K6 639 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 CALCOCO2Q13137 446 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 MTMR3Q13615 1198 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 PDXDC1Q6P996 788 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 CCDC105Q8IYK2 499 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 RNPC3Q96LT9 517 aaKnown RBP16.29■□□□□ 0.2
USP38-202ENST00000510377 RIC8AQ9NPQ8 531 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 STK38LQ9Y2H1 464 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 LRRN2O75325 713 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 PRPF6O94906 941 aaKnown RBP16.29■□□□□ 0.2
USP38-202ENST00000510377 CDK8P49336 464 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 LRRC63Q05C16 580 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 HAUS3Q68CZ6 603 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 NT5C3AQ9H0P0 336 aa16.29■□□□□ 0.2
USP38-202ENST00000510377 SFI1A8K8P3 1242 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 CALUO43852 315 aaPredicted RBP16.28■□□□□ 0.2
USP38-202ENST00000510377 GTF2IP78347 998 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 WDR59Q6PJI9 974 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 HOOK3Q86VS8 718 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 RIOK1Q9BRS2 568 aaKnown RBP16.28■□□□□ 0.2
USP38-202ENST00000510377 HDAC9Q9UKV0 1011 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 ORC4O43929 436 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 GNA14O95837 355 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 KLRC1P26715 233 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 GRM4Q14833 912 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 IL17AQ16552 155 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 NLRP14Q86W24 1093 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 TPH2Q8IWU9 490 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 WHAMMQ8TF30 809 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 FMN2Q9NZ56 1722 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 NPHP3-ACAD11A0A0J9YXS1 232 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 PBX1P40424 430 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 TBC1D10BQ4KMP7 808 aaPredicted RBP16.28■□□□□ 0.2
USP38-202ENST00000510377 PTPN22Q9Y2R2 807 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 TNS3Q68CZ2 1445 aa16.28■□□□□ 0.2
USP38-202ENST00000510377 DDX39AO00148 427 aaKnown RBP16.27■□□□□ 0.2
USP38-202ENST00000510377 PLA2G4BP0C869 781 aa16.27■□□□□ 0.2
USP38-202ENST00000510377 ACTN1P12814 892 aa16.27■□□□□ 0.2
USP38-202ENST00000510377 TMOD1P28289 359 aa16.27■□□□□ 0.2
USP38-202ENST00000510377 MTRQ99707 1265 aa16.27■□□□□ 0.2
USP38-202ENST00000510377 SH3GLB2Q9NR46 395 aa16.27■□□□□ 0.2
USP38-202ENST00000510377 AMACRQ9UHK6 382 aa16.27■□□□□ 0.2
USP38-202ENST00000510377 FRMD4BQ9Y2L6 1034 aa16.27■□□□□ 0.2
USP38-202ENST00000510377 PPP1R37O75864 691 aa16.27■□□□□ 0.2
USP38-202ENST00000510377 LSP1P33241 339 aa16.27■□□□□ 0.2
USP38-202ENST00000510377 SCNN1DP51172 638 aa16.27■□□□□ 0.2
USP38-202ENST00000510377 MAGOHP61326 146 aaKnown RBP16.27■□□□□ 0.2
USP38-202ENST00000510377 COASYQ13057 564 aa16.27■□□□□ 0.2
USP38-202ENST00000510377 STXBP4Q6ZWJ1 553 aa16.27■□□□□ 0.2
USP38-202ENST00000510377 CNBD1Q8NA66 436 aa16.27■□□□□ 0.2
USP38-202ENST00000510377 MAGOHBQ96A72 148 aaKnown RBP16.27■□□□□ 0.2
USP38-202ENST00000510377 CEP95Q96GE4 821 aa16.27■□□□□ 0.2
USP38-202ENST00000510377 SWAP70Q9UH65 585 aa16.27■□□□□ 0.2
USP38-202ENST00000510377 EXOC3O60645 756 aa16.27■□□□□ 0.19
USP38-202ENST00000510377 SEL1L2Q5TEA6 688 aa16.27■□□□□ 0.19
USP38-202ENST00000510377 CCDC50Q8IVM0 306 aa16.27■□□□□ 0.19
USP38-202ENST00000510377 TSEN2Q8NCE0 465 aaKnown RBP16.27■□□□□ 0.19
USP38-202ENST00000510377 SPATA20Q8TB22 786 aa16.27■□□□□ 0.19
USP38-202ENST00000510377 CCT8L2Q96SF2 557 aa16.27■□□□□ 0.19
USP38-202ENST00000510377 ASIC3Q9UHC3 531 aa16.27■□□□□ 0.19
USP38-202ENST00000510377 PLAGL2Q9UPG8 496 aa16.27■□□□□ 0.19
USP38-202ENST00000510377 ATP6V0A2Q9Y487 856 aa16.27■□□□□ 0.19
USP38-202ENST00000510377 RIC1Q4ADV7 1423 aa16.27■□□□□ 0.19
USP38-202ENST00000510377 POTEB3A0JP26 581 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 POTECB2RU33 542 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 DAPK3O43293 454 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 SNAP25P60880 206 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 AMPD2Q01433 879 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 KCNH2Q12809 1159 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 FAM133BQ5BKY9 247 aaKnown RBP16.26■□□□□ 0.19
USP38-202ENST00000510377 HIBCHQ6NVY1 386 aaPredicted RBP16.26■□□□□ 0.19
USP38-202ENST00000510377 POTEBQ6S5H4 581 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 SYCE1Q8N0S2 351 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 ATP6V1G3Q96LB4 118 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 DUSP9Q99956 384 aaKnown RBP16.26■□□□□ 0.19
USP38-202ENST00000510377 RNF14Q9UBS8 474 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 LRRC10BA6NIK2 292 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 HMGB1P1B2RPK0 211 aaPredicted RBP16.26■□□□□ 0.19
USP38-202ENST00000510377 FGGP02679 453 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 ZNF211Q13398 564 aaPredicted RBP16.26■□□□□ 0.19
USP38-202ENST00000510377 TMED8Q6PL24 325 aaPredicted RBP16.26■□□□□ 0.19
USP38-202ENST00000510377 FAM196AQ6ZSG2 479 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 SPATS2Q86XZ4 545 aaKnown RBP16.26■□□□□ 0.19
USP38-202ENST00000510377 GUF1Q8N442 669 aaKnown RBP16.26■□□□□ 0.19
USP38-202ENST00000510377 MMGT1Q8N4V1 131 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms