RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 CYP3A7P24462 503 aa19.82■□□□□ 0.76
CCHCR1-228ENST00000509552 KCNMA1Q12791 1236 aa19.82■□□□□ 0.76
CCHCR1-228ENST00000509552 AP3B2Q13367 1082 aa19.82■□□□□ 0.76
CCHCR1-228ENST00000509552 CDC37Q16543 378 aaPredicted RBP19.82■□□□□ 0.76
CCHCR1-228ENST00000509552 CERKLQ49MI3 558 aaPredicted RBP19.82■□□□□ 0.76
CCHCR1-228ENST00000509552 SLC9C1Q4G0N8 1177 aa19.82■□□□□ 0.76
CCHCR1-228ENST00000509552 TDRD12Q587J7 1177 aaKnown RBP19.82■□□□□ 0.76
CCHCR1-228ENST00000509552 HAUS3Q68CZ6 603 aa19.82■□□□□ 0.76
CCHCR1-228ENST00000509552 MCTP2Q6DN12 878 aa19.82■□□□□ 0.76
CCHCR1-228ENST00000509552 POTEBQ6S5H4 581 aa19.82■□□□□ 0.76
CCHCR1-228ENST00000509552 GREB1LQ9C091 1923 aaPredicted RBP19.82■□□□□ 0.76
CCHCR1-228ENST00000509552 PDE2AO00408 941 aaPredicted RBP19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 PJA2O43164 708 aa19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 N4BP1O75113 896 aaKnown RBP19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 TCP1P17987 556 aaKnown RBP19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 LMAN1P49257 510 aa19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 MOXD1Q6UVY6 613 aa19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 NELFCDQ8IXH7 590 aa19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 CCDC155Q8N6L0 562 aa19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 SYN2Q92777 582 aaPredicted RBP19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 DRC1Q96MC2 740 aa19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 ZDHHC15Q96MV8 337 aa19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 LUC7LQ9NQ29 371 aaKnown RBP19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 SFMBT2Q5VUG0 894 aa19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 CREG2Q8IUH2 290 aa19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 ZFPM1Q8IX07 1006 aa19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 NLRC4Q9NPP4 1024 aa19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 EMILIN3Q9NT22 766 aa19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 PI4KBQ9UBF8 816 aa19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 FAM184BQ9ULE4 1060 aa19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 HYOU1Q9Y4L1 999 aa19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 PCDHA2Q9Y5H9 948 aa19.81■□□□□ 0.76
CCHCR1-228ENST00000509552 CYP11B2P19099 503 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 MARSP56192 900 aaKnown RBP19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 ITIH3Q06033 890 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 C2orf54Q08AI8 447 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 ASTE1Q2TB18 679 aaPredicted RBP19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 NLGN1Q8N2Q7 840 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 MBOAT7Q96N66 472 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 UIMC1Q96RL1 719 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 DNAJC18Q9H819 358 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 FAN1Q9Y2M0 1017 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 PITPNM2Q9BZ72 1349 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 SERPING1P05155 500 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 EPS15P42566 896 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 HNRNPH2P55795 449 aaKnown RBP19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 GFPT1Q06210 699 aaPredicted RBP19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 TCP10Q12799 353 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 FAM83BQ5T0W9 1011 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 PPP4R3CPQ6ZMV5 832 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 PODNQ7Z5L7 613 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 MMGT1Q8N4V1 131 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 RNF10Q8N5U6 811 aaKnown RBP19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 ERMNQ8TAM6 284 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 NOX5Q96PH1 765 aa19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 LSM14BQ9BX40 385 aaKnown RBP19.8■□□□□ 0.76
CCHCR1-228ENST00000509552 NPHP3-ACAD11A0A0J9YXS1 232 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 A0A0U1RQG5 324 aaPredicted RBP19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 SLURP2P0DP57 97 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 PDE6BP35913 854 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 CACNB1Q02641 598 aaPredicted RBP19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 CCDC181Q5TID7 509 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 HGSNATQ68CP4 663 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 ZNF572Q7Z3I7 529 aaPredicted RBP19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 GPIHBP1Q8IV16 184 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 TRIM59Q8IWR1 403 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 SCFD1Q8WVM8 642 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 OSBPL9Q96SU4 736 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 FGFBP2Q9BYJ0 223 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 ZHX3Q9H4I2 956 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 MED24O75448 989 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 RBM5P52756 815 aaKnown RBP eCLIP19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 ARHGAP4P98171 946 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 RASSF7Q02833 373 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 ADAM9Q13443 819 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 CCNI2Q6ZMN8 369 aaPredicted RBP19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 AMNQ9BXJ7 453 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 KCTD10Q9H3F6 313 aa19.79■□□□□ 0.76
CCHCR1-228ENST00000509552 ARFGEF1Q9Y6D6 1849 aa19.78■□□□□ 0.76
CCHCR1-228ENST00000509552 ADAMTSL1Q8N6G6 1762 aa19.78■□□□□ 0.76
CCHCR1-228ENST00000509552 FAM196BA6NMK8 535 aa19.78■□□□□ 0.76
CCHCR1-228ENST00000509552 CETN3O15182 167 aa19.78■□□□□ 0.76
CCHCR1-228ENST00000509552 TRIM37O94972 964 aa19.78■□□□□ 0.76
CCHCR1-228ENST00000509552 STAT3P40763 770 aa19.78■□□□□ 0.76
CCHCR1-228ENST00000509552 AARSP49588 968 aaKnown RBP eCLIP19.78■□□□□ 0.76
CCHCR1-228ENST00000509552 NAP1L1P55209 391 aaKnown RBP19.78■□□□□ 0.76
CCHCR1-228ENST00000509552 POLR2FP61218 127 aaKnown RBP19.78■□□□□ 0.76
CCHCR1-228ENST00000509552 RAD51AP2Q09MP3 1159 aa19.78■□□□□ 0.76
CCHCR1-228ENST00000509552 EDRF1Q3B7T1 1238 aa19.78■□□□□ 0.76
CCHCR1-228ENST00000509552 COG1Q8WTW3 980 aa19.78■□□□□ 0.76
CCHCR1-228ENST00000509552 RUBCNQ92622 972 aa19.78■□□□□ 0.76
CCHCR1-228ENST00000509552 MRIQ9BWK5 157 aa19.78■□□□□ 0.76
CCHCR1-228ENST00000509552 STK24Q9Y6E0 443 aa19.78■□□□□ 0.76
CCHCR1-228ENST00000509552 ANKRD31Q8N7Z5 1873 aa19.78■□□□□ 0.76
CCHCR1-228ENST00000509552 RBAK-RBAKDNI3L0D1 243 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 MEIS2O14770 477 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 TBX3O15119 743 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 ZMYND10O75800 440 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 NOL4O94818 638 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms