RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 RRAGAQ7L523 313 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 KRT26Q7Z3Y9 468 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 SPICE1Q8N0Z3 855 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 CAGE1Q8TC20 777 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 SMCR8Q8TEV9 937 aaPredicted RBP12.13□□□□□ -0.47
SEC31A-228ENST00000509142 EXOC4Q96A65 974 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 MTMR8Q96EF0 704 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 ERLIN1O75477 346 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 AP3B2Q13367 1082 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 PAPD7Q5XG87 772 aaKnown RBP12.13□□□□□ -0.47
SEC31A-228ENST00000509142 WDR93Q6P2C0 686 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 GSPT2Q8IYD1 628 aaKnown RBP12.13□□□□□ -0.47
SEC31A-228ENST00000509142 GLIS3Q8NEA6 775 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 CSRNP1Q96S65 589 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 SERPINA10Q9UK55 444 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 PPIP5K2O43314 1243 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 NDUFB10O96000 172 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 BMP3P12645 472 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 ZSCAN26Q16670 478 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 MUM1L1Q5H9M0 696 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 SYDE2Q5VT97 1194 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 SH3BP5LQ7L8J4 393 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 CAPZA3Q96KX2 299 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 GDAP1L1Q96MZ0 367 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 ATF5Q9Y2D1 282 aaPredicted RBP12.13□□□□□ -0.47
SEC31A-228ENST00000509142 SYF2O95926 243 aaKnown RBP12.12□□□□□ -0.47
SEC31A-228ENST00000509142 HOXA7P31268 230 aaPredicted RBP12.12□□□□□ -0.47
SEC31A-228ENST00000509142 USP14P54578 494 aa12.12□□□□□ -0.47
SEC31A-228ENST00000509142 PSD3Q9NYI0 1048 aa12.12□□□□□ -0.47
SEC31A-228ENST00000509142 EIF3CLB5ME19 914 aaKnown RBP12.12□□□□□ -0.47
SEC31A-228ENST00000509142 FIGNQ5HY92 759 aa12.12□□□□□ -0.47
SEC31A-228ENST00000509142 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
SEC31A-228ENST00000509142 STYK1Q6J9G0 422 aa12.12□□□□□ -0.47
SEC31A-228ENST00000509142 TXLNBQ8N3L3 684 aa12.12□□□□□ -0.47
SEC31A-228ENST00000509142 RIN2Q8WYP3 895 aaPredicted RBP12.12□□□□□ -0.47
SEC31A-228ENST00000509142 EIF3CQ99613 913 aaKnown RBP12.12□□□□□ -0.47
SEC31A-228ENST00000509142 JADE2Q9NQC1 790 aa12.12□□□□□ -0.47
SEC31A-228ENST00000509142 COL4A3BPQ9Y5P4 624 aa12.12□□□□□ -0.47
SEC31A-228ENST00000509142 SAR1BQ9Y6B6 198 aa12.12□□□□□ -0.47
SEC31A-228ENST00000509142 NPHP3-ACAD11A0A0J9YXS1 232 aa12.12□□□□□ -0.47
SEC31A-228ENST00000509142 A0A1W2PQJ5 194 aa12.12□□□□□ -0.47
SEC31A-228ENST00000509142 FOSP01100 380 aaPredicted RBP12.12□□□□□ -0.47
SEC31A-228ENST00000509142 TDRD12Q587J7 1177 aaKnown RBP12.12□□□□□ -0.47
SEC31A-228ENST00000509142 MCTP2Q6DN12 878 aa12.12□□□□□ -0.47
SEC31A-228ENST00000509142 MSL3Q8N5Y2 521 aaKnown RBP12.12□□□□□ -0.47
SEC31A-228ENST00000509142 PURBQ96QR8 312 aaKnown RBP12.12□□□□□ -0.47
SEC31A-228ENST00000509142 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.12□□□□□ -0.47
SEC31A-228ENST00000509142 DNM3Q9UQ16 869 aa12.12□□□□□ -0.47
SEC31A-228ENST00000509142 TCP10L2B9ZVM9 353 aa12.12□□□□□ -0.47
SEC31A-228ENST00000509142 HOXA13P31271 388 aaPredicted RBP12.12□□□□□ -0.47
SEC31A-228ENST00000509142 FKBP1AP62942 108 aaKnown RBP12.12□□□□□ -0.47
SEC31A-228ENST00000509142 DNAJC19Q96DA6 116 aa12.12□□□□□ -0.47
SEC31A-228ENST00000509142 POTEFA5A3E0 1075 aa12.11□□□□□ -0.47
SEC31A-228ENST00000509142 MEIS1O00470 390 aa12.11□□□□□ -0.47
SEC31A-228ENST00000509142 POTEIP0CG38 1075 aa12.11□□□□□ -0.47
SEC31A-228ENST00000509142 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
SEC31A-228ENST00000509142 POTEEQ6S8J3 1075 aa12.11□□□□□ -0.47
SEC31A-228ENST00000509142 SECISBP2LQ93073 1101 aaKnown RBP12.11□□□□□ -0.47
SEC31A-228ENST00000509142 PRMT6Q96LA8 375 aaPredicted RBP12.11□□□□□ -0.47
SEC31A-228ENST00000509142 IFIH1Q9BYX4 1025 aaKnown RBP12.11□□□□□ -0.47
SEC31A-228ENST00000509142 TSGA10Q9BZW7 698 aa12.11□□□□□ -0.47
SEC31A-228ENST00000509142 NLRC4Q9NPP4 1024 aa12.11□□□□□ -0.47
SEC31A-228ENST00000509142 MEIS2O14770 477 aa12.11□□□□□ -0.47
SEC31A-228ENST00000509142 NAP1L1P55209 391 aaKnown RBP12.11□□□□□ -0.47
SEC31A-228ENST00000509142 PABPC4Q13310 644 aaKnown RBP eCLIP12.11□□□□□ -0.471e-9■■■■□ 20.4
SEC31A-228ENST00000509142 EZH2Q15910 746 aaKnown RBP12.11□□□□□ -0.47
SEC31A-228ENST00000509142 TATDN1Q6P1N9 297 aa12.11□□□□□ -0.47
SEC31A-228ENST00000509142 EMILIN3Q9NT22 766 aa12.11□□□□□ -0.47
SEC31A-228ENST00000509142 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.11□□□□□ -0.47
SEC31A-228ENST00000509142 ARHGAP20Q9P2F6 1191 aa12.11□□□□□ -0.47
SEC31A-228ENST00000509142 SALL4Q9UJQ4 1053 aa12.11□□□□□ -0.47
SEC31A-228ENST00000509142 PLAGL2Q9UPG8 496 aa12.11□□□□□ -0.47
SEC31A-228ENST00000509142 CAPN6Q9Y6Q1 641 aa12.11□□□□□ -0.47
SEC31A-228ENST00000509142 CLRN2A0PK11 232 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 MED24O75448 989 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 EIF4A3P38919 411 aaKnown RBP12.1□□□□□ -0.47
SEC31A-228ENST00000509142 VAV2P52735 878 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 MRPS25P82663 173 aaKnown RBP12.1□□□□□ -0.47
SEC31A-228ENST00000509142 CYP4A11Q02928 519 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 GPS2Q13227 327 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 SUPT20HQ8NEM7 779 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 HDAC7Q8WUI4 952 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 ZFP91Q96JP5 570 aaPredicted RBP12.1□□□□□ -0.47
SEC31A-228ENST00000509142 DRC1Q96MC2 740 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 CRACR2AQ9BSW2 395 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 ARHGEF10LQ9HCE6 1279 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 KCNMB3Q9NPA1 279 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 ABCB11O95342 1321 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 LRRC53A6NM62 1247 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 ENTPD3O75355 529 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 TACC1O75410 805 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 PRPF6O94906 941 aaKnown RBP12.1□□□□□ -0.47
SEC31A-228ENST00000509142 GNA14O95837 355 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 ADAM9Q13443 819 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 ZNF662Q6ZS27 426 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 LRRC55Q6ZSA7 311 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 SIAH1Q8IUQ4 282 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 GBP3Q9H0R5 595 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 SIK3Q9Y2K2 1263 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 LRRC37AA6NMS7 1700 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms