RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 A0A1W2PQJ5 194 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 PEX11AO75192 247 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 FAM200BP0CF97 657 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 CCDC166P0CW27 439 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 CCNB1P14635 433 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 IARSP41252 1262 aaKnown RBP10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 MMP13P45452 471 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 TMEM62Q0P6H9 643 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 RALYLQ86SE5 291 aaKnown RBP10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 HOOK3Q86VS8 718 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 LONP2Q86WA8 852 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 ENDOVQ8N8Q3 282 aaKnown RBP10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 KLHDC4Q8TBB5 520 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 NUDT16Q96DE0 195 aaKnown RBP10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 NOX5Q96PH1 765 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 CIDEBQ9UHD4 219 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 PNMA2Q9UL42 364 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 PCDHB6Q9Y5E3 794 aa10.95□□□□□ -0.66
PDGFRA-207ENST00000509092 PRR36Q9H6K5 1346 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 PALM3A6NDB9 673 aaPredicted RBP10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 F8VZ95 297 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 O00370 1275 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 TMCC1O94876 653 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 PDE6CP51160 858 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 SF3A3Q12874 501 aaKnown RBP eCLIP10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 DIXDC1Q155Q3 683 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 ZNF658Q5TYW1 1059 aaPredicted RBP10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 KSR2Q6VAB6 950 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 RNF168Q8IYW5 571 aaPredicted RBP10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 INPP4AQ96PE3 977 aaPredicted RBP10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 DBNDD2Q9BQY9 259 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 EXOC1Q9NV70 894 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 MAPK8IP1Q9UQF2 711 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 WDR37Q9Y2I8 494 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 LRCH1Q9Y2L9 728 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 BZW2Q9Y6E2 419 aaKnown RBP10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 BTBD18B2RXH4 712 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 SUN1O94901 812 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 MMP1P03956 469 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 SHBGP04278 402 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 ZNF24P17028 368 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 HNRNPH3P31942 346 aaKnown RBP10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 KIF11P52732 1056 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 SH3BGRP55822 239 aaPredicted RBP10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 EIF4A1P60842 406 aaKnown RBP10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 PARP6Q2NL67 630 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 FIGNQ5HY92 759 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 SPDYCQ5MJ68 293 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 SFMBT2Q5VUG0 894 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 RBBP8NLQ8NC74 664 aaPredicted RBP10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 GBP5Q96PP8 586 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 SELENOSQ9BQE4 189 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 FOXP1Q9H334 677 aaPredicted RBP10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 INTS9Q9NV88 658 aaKnown RBP10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 PAG1Q9NWQ8 432 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 TMEM94Q12767 1356 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 USP31Q70CQ4 1352 aa10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 XIRP1Q702N8 1843 aaKnown RBP10.94□□□□□ -0.66
PDGFRA-207ENST00000509092 SOS2Q07890 1332 aaPredicted RBP10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 TMEM221A6NGB7 291 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 ZNF189O75820 626 aaPredicted RBP10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 ANXA1P04083 346 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 HAND2P61296 217 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 TFCP2Q12800 502 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 CHADLQ6NUI6 762 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 ZNF365Q70YC5 407 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 TMC3Q7Z5M5 1100 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 DIS3L2Q8IYB7 885 aaKnown RBP10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 USHBP1Q8N6Y0 703 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 PIGOQ8TEQ8 1089 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 SH3TC2Q8TF17 1288 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 ATP8B4Q8TF62 1192 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 UCMAQ8WVF2 138 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 C17orf50Q8WW18 174 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 ARHGEF1Q92888 912 aaKnown RBP10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 ADAM7Q9H2U9 754 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 RXFP1Q9HBX9 757 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 PDP2Q9P2J9 529 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 MAGEC2Q9UBF1 373 aaPredicted RBP10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 TMEM59LQ9UK28 342 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 RNF113AO15541 343 aaKnown RBP10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 MBD4O95243 580 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 PLEKP08567 350 aaPredicted RBP10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 SERPINB4P48594 390 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 BPIFB4P59827 614 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 NTRK3Q16288 839 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 MUM1Q2TAK8 710 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 CCDC152Q4G0S7 254 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 SH2D4BQ5SQS7 431 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 RINLQ6ZS11 566 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 USP38Q8NB14 1042 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 CFAP61Q8NHU2 1237 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 LPIN2Q92539 896 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 WASF1Q92558 559 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 EPSTI1Q96J88 318 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 PRMT1Q99873 361 aaKnown RBP10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 CARD9Q9H257 536 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 NEUROG2Q9H2A3 272 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 COPRSQ9NQ92 184 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 RMND1Q9NWS8 449 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms