RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 MAATS1Q7Z4T9 603 aa14.78□□□□□ -0.04
SNCAIP-209ENST00000508017 CD302Q8IX05 232 aa14.78□□□□□ -0.04
SNCAIP-209ENST00000508017 MYOCDQ8IZQ8 938 aa14.78□□□□□ -0.04
SNCAIP-209ENST00000508017 PRPF38AQ8NAV1 312 aaKnown RBP14.78□□□□□ -0.04
SNCAIP-209ENST00000508017 COA7Q96BR5 231 aa14.78□□□□□ -0.04
SNCAIP-209ENST00000508017 PCDHGC5Q9Y5F6 944 aa14.78□□□□□ -0.04
SNCAIP-209ENST00000508017 A6NNZ2 444 aa14.77□□□□□ -0.04
SNCAIP-209ENST00000508017 LDHBP07195 334 aaKnown RBP14.77□□□□□ -0.04
SNCAIP-209ENST00000508017 MNAT1P51948 309 aa14.77□□□□□ -0.04
SNCAIP-209ENST00000508017 COASYQ13057 564 aa14.77□□□□□ -0.04
SNCAIP-209ENST00000508017 TUBB8Q3ZCM7 444 aa14.77□□□□□ -0.04
SNCAIP-209ENST00000508017 CEP85LQ5SZL2 805 aa14.77□□□□□ -0.04
SNCAIP-209ENST00000508017 SWT1Q5T5J6 900 aaKnown RBP14.77□□□□□ -0.04
SNCAIP-209ENST00000508017 FAM133AQ8N9E0 248 aa14.77□□□□□ -0.04
SNCAIP-209ENST00000508017 OR2W6PQ8NHA6 318 aa14.77□□□□□ -0.04
SNCAIP-209ENST00000508017 UIMC1Q96RL1 719 aa14.77□□□□□ -0.04
SNCAIP-209ENST00000508017 ADAMTS1Q9UHI8 967 aa14.77□□□□□ -0.04
SNCAIP-209ENST00000508017 DDX60LQ5H9U9 1706 aaKnown RBP14.77□□□□□ -0.04
SNCAIP-209ENST00000508017 HPDP32754 393 aaPredicted RBP14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 MDH1P40925 334 aaKnown RBP14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 ERVK-9P63128 1117 aa14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 ITGB3BPQ13352 177 aaPredicted RBP14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 SLC18A3Q16572 532 aa14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 NLRP14Q86W24 1093 aa14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 NELFCDQ8IXH7 590 aa14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 USP38Q8NB14 1042 aa14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 MYCBPAPQ8TBZ2 947 aa14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 DNAJC19Q96DA6 116 aa14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 CCT8L2Q96SF2 557 aa14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 CEP89Q96ST8 783 aa14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 EYA3Q99504 573 aa14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 CENPHQ9H3R5 247 aa14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 RIC8AQ9NPQ8 531 aa14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 FRMPD2Q68DX3 1309 aaPredicted RBP14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 ATXN2Q99700 1313 aaKnown RBP14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 CDK5RAP2Q96SN8 1893 aa14.77□□□□□ -0.05
SNCAIP-209ENST00000508017 USP17L5A8MUK1 530 aa14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 FKBP3Q00688 224 aaKnown RBP14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 TMEM266Q2M3C6 531 aa14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 TMEM119Q4V9L6 283 aa14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 EMC10Q5UCC4 262 aa14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 SPTY2D1Q68D10 685 aaPredicted RBP14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 CLEC4GQ6UXB4 293 aa14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 DDX42Q86XP3 938 aaKnown RBP eCLIP14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 WHAMMQ8TF30 809 aa14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 IRS2Q9Y4H2 1338 aa14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 COL14A1Q05707 1796 aaKnown RBP14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 KCNK3O14649 394 aa14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 FSBPO95073 299 aa14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 MYBP10242 640 aa14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 ECHS1P30084 290 aa14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 HSPA9P38646 679 aaKnown RBP14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 CDK8P49336 464 aa14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 CACNB1Q02641 598 aaPredicted RBP14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 HLTFQ14527 1009 aaKnown RBP eCLIP14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 KRT79Q5XKE5 535 aa14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 SYN2Q92777 582 aaPredicted RBP14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 CEP95Q96GE4 821 aa14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 SBF2Q86WG5 1849 aa14.76□□□□□ -0.05
SNCAIP-209ENST00000508017 H0YHG0 523 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 SSBP05455 408 aaKnown RBP eCLIP14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 KLHL30Q0D2K2 578 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 RNF187Q5TA31 235 aaPredicted RBP14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 PROM2Q8N271 834 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 MARCH10Q8NA82 808 aaPredicted RBP14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 ANKRD2Q9GZV1 360 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 TMBIM4Q9HC24 238 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 TMEM59LQ9UK28 342 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 NPHP3-ACAD11A0A0J9YXS1 232 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 HMGB1P1B2RPK0 211 aaPredicted RBP14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 E7EVH7 732 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 HSD17B3P37058 310 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 TNNC1P63316 161 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 PSMD2Q13200 908 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 UAP1Q16222 522 aaPredicted RBP14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 SLC10A5Q5PT55 438 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 FAM26FQ5R3K3 315 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 TRIM59Q8IWR1 403 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 LINC00116Q8NCU8 138 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 GPR101Q96P66 508 aaPredicted RBP14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 NCAPGQ9BPX3 1015 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 PAGR1Q9BTK6 254 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 NEUROG2Q9H2A3 272 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 ZNF335Q9H4Z2 1342 aaPredicted RBP14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 TAF1DQ9H5J8 278 aaPredicted RBP14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 LUC7LQ9NQ29 371 aaKnown RBP14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 PPANQ9NQ55 473 aaKnown RBP14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 PANK4Q9NVE7 773 aa14.75□□□□□ -0.05
SNCAIP-209ENST00000508017 KCNQ2O43526 872 aa14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 ACTN1P12814 892 aa14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 TNNI2P48788 182 aa14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 IFT88Q13099 833 aa14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 ORC2Q13416 577 aaPredicted RBP14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 ASIC2Q16515 512 aa14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 DDB1Q16531 1140 aa14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 UBE2SQ16763 222 aa14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 AP1M1Q9BXS5 423 aa14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 NUCKS1Q9H1E3 243 aaKnown RBP14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 GANQ9H2C0 597 aa14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 GEMIN8Q9NWZ8 242 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms