RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ZNF646O15015 1829 aaPredicted RBP16.07■□□□□ 0.16
DDX41-208ENST00000507955 MACROD2A1Z1Q3 448 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 SPDYE2BA6NHP3 402 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 SFI1A8K8P3 1242 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 ATP8B1O43520 1251 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 SPDYE6P0CI01 402 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 POLD1P28340 1107 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 FKBP1AP62942 108 aaKnown RBP16.07■□□□□ 0.16
DDX41-208ENST00000507955 ZBED6P86452 979 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 SMC1AQ14683 1233 aaKnown RBP16.07■□□□□ 0.16
DDX41-208ENST00000507955 MEA1Q16626 185 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 ERGIC2Q96RQ1 377 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 NAPGQ99747 312 aaPredicted RBP16.07■□□□□ 0.16
DDX41-208ENST00000507955 IKZF4Q9H2S9 585 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 FBXO28Q9NVF7 368 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 RNF216Q9NWF9 866 aaPredicted RBP16.07■□□□□ 0.16
DDX41-208ENST00000507955 RSPH10B2B2RC85 870 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 MSH4O15457 936 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 CHMP2AO43633 222 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 RHOXF2BP0C7M4 288 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 RSPH10BP0C881 870 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 SPATA31C1P0DKV0 1188 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 GYS2P54840 703 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 LONRF2Q1L5Z9 754 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 AEBP2Q6ZN18 517 aaPredicted RBP16.07■□□□□ 0.16
DDX41-208ENST00000507955 KIAA1328Q86T90 577 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 LARGE2Q8N3Y3 721 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 SCFD1Q8WVM8 642 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 GMCL1Q96IK5 515 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 RHOXF2Q9BQY4 288 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 NLRC4Q9NPP4 1024 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 ARHGAP20Q9P2F6 1191 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 PCDHA2Q9Y5H9 948 aa16.07■□□□□ 0.16
DDX41-208ENST00000507955 COL4A5P29400 1685 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 EML1O00423 815 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 ENTPD3O75355 529 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 ATP1A1P05023 1023 aaKnown RBP16.06■□□□□ 0.16
DDX41-208ENST00000507955 SEMA3FQ13275 785 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 DGKZQ13574 1117 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 COBLL1Q53SF7 1204 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 RRAGAQ7L523 313 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 ZNF70Q9UC06 446 aaPredicted RBP16.06■□□□□ 0.16
DDX41-208ENST00000507955 CYP3A7-CYP3A51PA0A087WV96 503 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 LRRC53A6NM62 1247 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 H3BQF6 201 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 CYP3A7P24462 503 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 ZNF76P36508 570 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 SLC12A3P55017 1021 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 KCNMA1Q12791 1236 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 MAN2A1Q16706 1144 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 ZCWPW2Q504Y3 356 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 NEK11Q8NG66 645 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 PIGOQ8TEQ8 1089 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 NT5C3AQ9H0P0 336 aa16.06■□□□□ 0.16
DDX41-208ENST00000507955 BMP2KQ9NSY1 1161 aaPredicted RBP16.06■□□□□ 0.16
DDX41-208ENST00000507955 ZNHIT6Q9NWK9 470 aaKnown RBP16.06■□□□□ 0.16
DDX41-208ENST00000507955 C10orf71Q711Q0 1435 aa16.05■□□□□ 0.16
DDX41-208ENST00000507955 FAM193AP78312 1265 aa16.05■□□□□ 0.16
DDX41-208ENST00000507955 DLGAP5Q15398 846 aa16.05■□□□□ 0.16
DDX41-208ENST00000507955 RSBN1LQ6PCB5 846 aaPredicted RBP16.05■□□□□ 0.16
DDX41-208ENST00000507955 NOA1Q8NC60 698 aaKnown RBP16.05■□□□□ 0.16
DDX41-208ENST00000507955 CAPZA3Q96KX2 299 aa16.05■□□□□ 0.16
DDX41-208ENST00000507955 ATRNL1Q5VV63 1379 aa16.05■□□□□ 0.16
DDX41-208ENST00000507955 STAT2P52630 851 aa16.05■□□□□ 0.16
DDX41-208ENST00000507955 LRRC63Q05C16 580 aa16.05■□□□□ 0.16
DDX41-208ENST00000507955 KCNA1Q09470 495 aa16.05■□□□□ 0.16
DDX41-208ENST00000507955 ENOX2Q16206 610 aaKnown RBP16.05■□□□□ 0.16
DDX41-208ENST00000507955 CCDC40Q4G0X9 1142 aa16.05■□□□□ 0.16
DDX41-208ENST00000507955 HYIQ5T013 277 aa16.05■□□□□ 0.16
DDX41-208ENST00000507955 ANKRD13CQ8N6S4 541 aa16.05■□□□□ 0.16
DDX41-208ENST00000507955 JAKMIP2Q96AA8 810 aa16.05■□□□□ 0.16
DDX41-208ENST00000507955 SUGCTQ9HAC7 445 aa16.05■□□□□ 0.16
DDX41-208ENST00000507955 EMILIN3Q9NT22 766 aa16.05■□□□□ 0.16
DDX41-208ENST00000507955 CCDC151A5D8V7 595 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 CTTNQ14247 550 aaKnown RBP16.04■□□□□ 0.16
DDX41-208ENST00000507955 DEFB132Q7Z7B7 95 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 DRC1Q96MC2 740 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 MBOAT7Q96N66 472 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 CAMKK2Q96RR4 588 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 HINFPQ9BQA5 517 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 REEP2Q9BRK0 252 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 NUP58Q9BVL2 599 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 BHMT2Q9H2M3 363 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 CNTNAP1P78357 1384 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 KDM3AQ9Y4C1 1321 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 ZNF185O15231 689 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 DPEP1P16444 411 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 SREBF1P36956 1147 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 EIF4A3P38919 411 aaKnown RBP16.04■□□□□ 0.16
DDX41-208ENST00000507955 PPP1R2P41236 205 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 AMPD2Q01433 879 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 PSMD2Q13200 908 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 AP3B2Q13367 1082 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 NBPF9Q3BBW0 867 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 CCDC42Q96M95 316 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 TSG101Q99816 390 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 WDR18Q9BV38 432 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 STK32BQ9NY57 414 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 MYO6Q9UM54 1294 aa16.04■□□□□ 0.16
DDX41-208ENST00000507955 PCNTO95613 3336 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms