RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 HHIPL2Q6UWX4 724 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 TCEAL8Q8IYN2 117 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 EFHBQ8N7U6 833 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 C1orf162Q8NEQ5 155 aaPredicted RBP5.35□□□□□ -1.55
USP53-204ENST00000507906 NETO1Q8TDF5 533 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 LINC01599Q8WXQ3 324 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 TMEM169Q96HH4 297 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 CD244Q9BZW8 370 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 MARCH2Q9P0N8 246 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 RWDD3Q9Y3V2 267 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 SPEF1Q9Y4P9 236 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 TELO2Q9Y4R8 837 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 X6R8D5 127 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 NOTOA8MTQ0 251 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 H7BY64 318 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 KIF3BO15066 747 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 CYP26A1O43174 497 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 GPR3P46089 330 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 SESN3P58005 492 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 RHBDL3P58872 404 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 BNIP3Q12983 259 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 MLC1Q15049 377 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 NXNQ6DKJ4 435 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 ESRP1Q6NXG1 681 aaKnown RBP5.34□□□□□ -1.55
USP53-204ENST00000507906 CYP2R1Q6VVX0 501 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 OTOP3Q7RTS5 596 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 SLCO6A1Q86UG4 719 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 MAGEB6Q8N7X4 407 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 KIAA1958Q8N8K9 716 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.34□□□□□ -1.55
USP53-204ENST00000507906 TRMT2BQ96GJ1 504 aaKnown RBP5.34□□□□□ -1.55
USP53-204ENST00000507906 FCRL2Q96LA5 508 aaPredicted RBP5.34□□□□□ -1.55
USP53-204ENST00000507906 CAMKK2Q96RR4 588 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 BOCQ9BWV1 1114 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 ADAMTS10Q9H324 1103 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 ZMAT4Q9H898 229 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 ARNT2Q9HBZ2 717 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 ZFP64Q9NPA5 681 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 RIPOR2Q9Y4F9 1068 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 SPO11Q9Y5K1 396 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 SNX11Q9Y5W9 270 aa5.34□□□□□ -1.55
USP53-204ENST00000507906 TMEM265A0A087WTH1 108 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 SLC12A8A0AV02 714 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 GSTA4O15217 222 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 ULK1O75385 1050 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 RFPL1O75677 317 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 RBP3P10745 1247 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 GNAT1P11488 350 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 HTRA3P83110 453 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 IRF9Q00978 393 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 LRRC32Q14392 662 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 AOC3Q16853 763 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 ARHGAP44Q17R89 818 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 RALGPS1Q5JS13 557 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 PGM2L1Q6PCE3 622 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 NBPF11Q86T75 865 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 C11orf74Q86VG3 221 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 WFDC3Q8IUB2 231 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 CPA6Q8N4T0 437 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 LMBR1Q8WVP7 490 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 DLG3Q92796 817 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 RELTQ969Z4 430 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 MAP6Q96JE9 813 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 METTL22Q9BUU2 404 aaPredicted RBP5.33□□□□□ -1.56
USP53-204ENST00000507906 SLC13A1Q9BZW2 595 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 SEMA4AQ9H3S1 761 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 TCF7L1Q9HCS4 588 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 ADGRE2Q9UHX3 823 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 ZBTB21Q9ULJ3 1066 aa5.33□□□□□ -1.56
USP53-204ENST00000507906 LOC102724159A0A0B4J2E5 919 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 E2F8A0AVK6 867 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 FAM90A27PA6NNH2 459 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 SCDO00767 359 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 TPD52L2O43399 206 aaKnown RBP5.32□□□□□ -1.56
USP53-204ENST00000507906 USP2O75604 605 aaPredicted RBP5.32□□□□□ -1.56
USP53-204ENST00000507906 LTFP02788 710 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 APPP05067 770 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 TMEM253P0C7T8 217 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 FOSL1P15407 271 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 GTF2A2P52657 109 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 OCRLQ01968 901 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 MVKQ03426 396 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 PWP2Q15269 919 aaKnown RBP5.32□□□□□ -1.56
USP53-204ENST00000507906 ARTNQ5T4W7 220 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 HLA-DQA1Q5Y7H0 255 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 RASSF3Q86WH2 238 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 NLGN2Q8NFZ4 835 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 TGFBRAP1Q8WUH2 860 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 ZNF496Q96IT1 587 aaPredicted RBP5.32□□□□□ -1.56
USP53-204ENST00000507906 PLCD4Q9BRC7 762 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 CARS2Q9HA77 564 aaKnown RBP5.32□□□□□ -1.56
USP53-204ENST00000507906 LUC7LQ9NQ29 371 aaKnown RBP5.32□□□□□ -1.56
USP53-204ENST00000507906 ANLNQ9NQW6 1124 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 TOMM22Q9NS69 142 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 PIM2Q9P1W9 311 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 TNFRSF10DQ9UBN6 386 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 B3GALT1Q9Y5Z6 326 aa5.32□□□□□ -1.56
USP53-204ENST00000507906 RASSF10A6NK89 507 aa5.31□□□□□ -1.56
USP53-204ENST00000507906 GOLGA8AA7E2F4 631 aa5.31□□□□□ -1.56
USP53-204ENST00000507906 GOLGA8BA8MQT2 603 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms