RNA–Protein interactions for RNA: ENST00000507692.5

SNHG4-205, Transcript of small nucleolar RNA host gene 4, human

TSL 5

Gene SNHG4, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG4-205	ENST00000507692	MDM2	Q00987	491 aa	Predicted RBP	5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	SP2	Q02086	613 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	FAAP100	Q0VG06	881 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	SEMA3F	Q13275	785 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	MTMR1	Q13613	665 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	HSDL1	Q3SXM5	330 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	FAM47C	Q5HY64	1035 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	CELF3	Q5SZQ8	465 aa	Known RBP	5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	MYSM1	Q5VVJ2	828 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	JAKMIP3	Q5VZ66	844 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	NFRKB	Q6P4R8	1299 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	CYFIP1	Q7L576	1253 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	SH3RF1	Q7Z6J0	888 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	FAM126B	Q8IXS8	530 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	FAM177A1	Q8N128	213 aa	Predicted RBP	5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	SLC43A3	Q8NBI5	491 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	WASF1	Q92558	559 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	GTF3C6	Q969F1	213 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	PGBD1	Q96JS3	809 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	SPATA33	Q96N06	139 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	GDF15	Q99988	308 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	SENP7	Q9BQF6	1050 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	KATNAL1	Q9BW62	490 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	JADE2	Q9NQC1	790 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	TMEM39A	Q9NV64	488 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	VPS54	Q9P1Q0	977 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	TPCN1	Q9ULQ1	816 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	COLQ	Q9Y215	455 aa	Predicted RBP	5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	UBIAD1	Q9Y5Z9	338 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	COL4A4	P53420	1690 aa	Predicted RBP	5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	PLXNA4	Q9HCM2	1894 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	EYS	Q5T1H1	3165 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	NCOR1	O75376	2440 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	MTCL1	Q9Y4B5	1905 aa	Known RBP	5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	GRIN2D	O15399	1336 aa		5.74	□□□□□ -1.49
SNHG4-205	ENST00000507692	TRIM43B	A6NCK2	446 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	TIMP1	P01033	207 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	CD4	P01730	458 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	SUPT20HL2	P0C7V6	817 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	ZNF286B	P0CG31	522 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	HOXD8	P13378	290 aa	Predicted RBP	5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	RBM25	P49756	843 aa	Known RBP	5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	NLRP5	P59047	1200 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	CHMP4BP1	P59074	171 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	ARHGAP4	P98171	946 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	PTPN11	Q06124	597 aa	Predicted RBP	5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	ME3	Q16798	604 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	KIAA0753	Q2KHM9	967 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	NBPF20	Q3BBV1	942 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	CEP55	Q53EZ4	464 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	GALNT17	Q6IS24	598 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	METTL7B	Q6UX53	244 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	NIPA1	Q7RTP0	329 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	BLID	Q8IZY5	108 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	NECAB1	Q8N987	351 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	IL27	Q8NEV9	243 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	TRIM43	Q96BQ3	446 aa	Predicted RBP	5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	MXRA8	Q9BRK3	442 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	SDF4	Q9BRK5	362 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	UBE2O	Q9C0C9	1292 aa	Known RBP	5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	PRO3102	Q9H379	93 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	TMEM260	Q9NX78	707 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	ORC3	Q9UBD5	711 aa	Predicted RBP	5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	TBX21	Q9UL17	535 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	PCDHA4	Q9UN74	947 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	LIMCH1	Q9UPQ0	1083 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	GTF3C3	Q9Y5Q9	886 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	TCF20	Q9UGU0	1960 aa	Known RBP	5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	NFASC	O94856	1347 aa		5.73	□□□□□ -1.49
SNHG4-205	ENST00000507692	PRRC2B	Q5JSZ5	2229 aa	Known RBP	5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	MEIS1	O00470	390 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	ST18	O60284	1047 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	B4GALT4	O60513	344 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	ATP9A	O75110	1047 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	LARGE1	O95461	756 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	CTDNEP1	O95476	244 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	F2	P00734	622 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	LGALS2	P05162	132 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	CYP3A4	P08684	503 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	KCNA2	P16389	499 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	ITGB5	P18084	799 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	PSEN2	P49810	448 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	SET	Q01105	290 aa	Predicted RBP	5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	SP4	Q02446	784 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	FPGS	Q05932	587 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	MFSD10	Q14728	455 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	RABEP1	Q15276	862 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	HABP4	Q5JVS0	413 aa	Known RBP	5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	SESTD1	Q86VW0	696 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	TDH	Q8IZJ6	230 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	CCDC155	Q8N6L0	562 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	C7orf31	Q8N865	590 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	DAGLB	Q8NCG7	672 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	CYP2W1	Q8TAV3	490 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	RASGRP4	Q8TDF6	673 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	CRYGN	Q8WXF5	182 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	KAT2B	Q92831	832 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	BAD	Q92934	168 aa		5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	ZSCAN31	Q96LW9	406 aa	Predicted RBP	5.72	□□□□□ -1.49
SNHG4-205	ENST00000507692	AIFM3	Q96NN9	605 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms