RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 FAM83BQ5T0W9 1011 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 USP17L2Q6R6M4 530 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 C16orf86Q6ZW13 317 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 TXNRD3Q86VQ6 643 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 NBPF5PQ86XG9 351 aaPredicted RBP16.56■□□□□ 0.24
HERC6-206ENST00000506714 EIF1ADQ8N9N8 165 aaKnown RBP16.56■□□□□ 0.24
HERC6-206ENST00000506714 SNX29Q8TEQ0 813 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 PIGSQ96S52 555 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 RIOX1Q9H6W3 641 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 EPB41L5Q9HCM4 733 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 JAG2Q9Y219 1238 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 ATP6V0A2Q9Y487 856 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 PCDHGC5Q9Y5F6 944 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 MYH4Q9Y623 1939 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 CES2O00748 559 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 NDUFAB1O14561 156 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 GLI1P08151 1106 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 CDK8P49336 464 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 MRPS25P82663 173 aaKnown RBP16.56■□□□□ 0.24
HERC6-206ENST00000506714 SLC18A3Q16572 532 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 MS4A14Q96JA4 679 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 CCDC43Q96MW1 224 aaKnown RBP16.56■□□□□ 0.24
HERC6-206ENST00000506714 CPVLQ9H3G5 476 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 BMP2KQ9NSY1 1161 aaPredicted RBP16.56■□□□□ 0.24
HERC6-206ENST00000506714 NFU1Q9UMS0 254 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 TRAF5O00463 557 aa16.55■□□□□ 0.24
HERC6-206ENST00000506714 PALMO75781 387 aa16.55■□□□□ 0.24
HERC6-206ENST00000506714 INPP5BP32019 993 aa16.55■□□□□ 0.24
HERC6-206ENST00000506714 CARSP49589 748 aaKnown RBP16.55■□□□□ 0.24
HERC6-206ENST00000506714 GUCY2DQ02846 1103 aa16.55■□□□□ 0.24
HERC6-206ENST00000506714 CDC37Q16543 378 aaPredicted RBP16.55■□□□□ 0.24
HERC6-206ENST00000506714 ZCWPW2Q504Y3 356 aa16.55■□□□□ 0.24
HERC6-206ENST00000506714 MEI1Q5TIA1 1274 aa16.55■□□□□ 0.24
HERC6-206ENST00000506714 VAT1LQ9HCJ6 419 aa16.55■□□□□ 0.24
HERC6-206ENST00000506714 NLRC4Q9NPP4 1024 aa16.55■□□□□ 0.24
HERC6-206ENST00000506714 SNED1Q8TER0 1413 aa16.55■□□□□ 0.24
HERC6-206ENST00000506714 KIF13BQ9NQT8 1826 aa16.55■□□□□ 0.24
HERC6-206ENST00000506714 DDX60LQ5H9U9 1706 aaKnown RBP16.54■□□□□ 0.24
HERC6-206ENST00000506714 ADCY7P51828 1080 aa16.54■□□□□ 0.24
HERC6-206ENST00000506714 MARSP56192 900 aaKnown RBP16.54■□□□□ 0.24
HERC6-206ENST00000506714 TNNC1P63316 161 aa16.54■□□□□ 0.24
HERC6-206ENST00000506714 C10orf76Q5T2E6 689 aa16.54■□□□□ 0.24
HERC6-206ENST00000506714 MICALCLQ6ZW33 695 aa16.54■□□□□ 0.24
HERC6-206ENST00000506714 EHD4Q9H223 541 aa16.54■□□□□ 0.24
HERC6-206ENST00000506714 LEMD3Q9Y2U8 911 aa16.54■□□□□ 0.24
HERC6-206ENST00000506714 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.54■□□□□ 0.24
HERC6-206ENST00000506714 SRRM3A6NNA2 597 aaPredicted RBP16.54■□□□□ 0.24
HERC6-206ENST00000506714 NOL4O94818 638 aa16.54■□□□□ 0.24
HERC6-206ENST00000506714 USP8P40818 1118 aa16.54■□□□□ 0.24
HERC6-206ENST00000506714 ATP2B2Q01814 1243 aa16.54■□□□□ 0.24
HERC6-206ENST00000506714 MAPKAPK5Q8IW41 473 aa16.54■□□□□ 0.24
HERC6-206ENST00000506714 IFT81Q8WYA0 676 aa16.54■□□□□ 0.24
HERC6-206ENST00000506714 TMEM260Q9NX78 707 aa16.54■□□□□ 0.24
HERC6-206ENST00000506714 AIPL1Q9NZN9 384 aa16.54■□□□□ 0.24
HERC6-206ENST00000506714 MYH7BA7E2Y1 1941 aa16.54■□□□□ 0.24
HERC6-206ENST00000506714 BTNL10A8MVZ5 291 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 HMGB1P1B2RPK0 211 aaPredicted RBP16.53■□□□□ 0.24
HERC6-206ENST00000506714 SLC37A4O43826 429 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 TLR2O60603 784 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 KRT14P02533 472 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 GUCY2CP25092 1073 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 RXRBP28702 533 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 NOVP48745 357 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 LIG3P49916 1009 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 POLR2FP61218 127 aaKnown RBP16.53■□□□□ 0.24
HERC6-206ENST00000506714 COASYQ13057 564 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 FAM26FQ5R3K3 315 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 PPP4R3AQ6IN85 833 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 TPTE2Q6XPS3 522 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 PAGR1Q9BTK6 254 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 LSM14BQ9BX40 385 aaKnown RBP16.53■□□□□ 0.24
HERC6-206ENST00000506714 EPN3Q9H201 632 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 YY1AP1Q9H869 796 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 SAP30BPQ9UHR5 308 aaKnown RBP16.53■□□□□ 0.24
HERC6-206ENST00000506714 POTEMA6NI47 508 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 ZNF233A6NK53 670 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 KIAA0754O94854 1291 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 PLCG2P16885 1265 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 PDCLQ13371 301 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 LRRC41Q15345 812 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 DIXDC1Q155Q3 683 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 TBC1D5Q92609 795 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 TAF4BQ92750 862 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 DNAJC19Q96DA6 116 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 INPP4AQ96PE3 977 aaPredicted RBP16.53■□□□□ 0.24
HERC6-206ENST00000506714 NT5C3AQ9H0P0 336 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 PANK4Q9NVE7 773 aa16.53■□□□□ 0.24
HERC6-206ENST00000506714 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.53■□□□□ 0.24
HERC6-206ENST00000506714 KLRC1P26715 233 aa16.52■□□□□ 0.24
HERC6-206ENST00000506714 IFI16Q16666 785 aaKnown RBP16.52■□□□□ 0.24
HERC6-206ENST00000506714 KIAA0753Q2KHM9 967 aa16.52■□□□□ 0.24
HERC6-206ENST00000506714 TRIM59Q8IWR1 403 aa16.52■□□□□ 0.24
HERC6-206ENST00000506714 KRT12Q99456 494 aa16.52■□□□□ 0.24
HERC6-206ENST00000506714 KDM3AQ9Y4C1 1321 aa16.52■□□□□ 0.23
HERC6-206ENST00000506714 TNRC6CQ9HCJ0 1690 aaKnown RBP16.52■□□□□ 0.23
HERC6-206ENST00000506714 TDP2O95551 362 aa16.52■□□□□ 0.23
HERC6-206ENST00000506714 FAM153BP0C7A2 387 aa16.52■□□□□ 0.23
HERC6-206ENST00000506714 NR1D1P20393 614 aa16.52■□□□□ 0.23
HERC6-206ENST00000506714 LSP1P33241 339 aa16.52■□□□□ 0.23
HERC6-206ENST00000506714 KLHL30Q0D2K2 578 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms