RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 DUSP28Q4G0W2 176 aa19.27■□□□□ 0.68
SYNE4-207ENST00000505054 JAKMIP3Q5VZ66 844 aa19.27■□□□□ 0.68
SYNE4-207ENST00000505054 PCNX4Q63HM2 1172 aa19.27■□□□□ 0.68
SYNE4-207ENST00000505054 CXCL17Q6UXB2 119 aa19.27■□□□□ 0.68
SYNE4-207ENST00000505054 SEPT14Q6ZU15 432 aa19.27■□□□□ 0.68
SYNE4-207ENST00000505054 REXO1Q8N1G1 1221 aaKnown RBP19.27■□□□□ 0.68
SYNE4-207ENST00000505054 RASGRP4Q8TDF6 673 aa19.27■□□□□ 0.68
SYNE4-207ENST00000505054 HERVK_113Q902F9 699 aa19.27■□□□□ 0.68
SYNE4-207ENST00000505054 ALG1Q9BT22 464 aa19.27■□□□□ 0.68
SYNE4-207ENST00000505054 HIPK3Q9H422 1215 aa19.27■□□□□ 0.68
SYNE4-207ENST00000505054 PRDM12Q9H4Q4 367 aa19.27■□□□□ 0.68
SYNE4-207ENST00000505054 MSRAQ9UJ68 235 aa19.27■□□□□ 0.68
SYNE4-207ENST00000505054 ZEB2O60315 1214 aa19.26■□□□□ 0.67
SYNE4-207ENST00000505054 FOSP01100 380 aaPredicted RBP19.26■□□□□ 0.67
SYNE4-207ENST00000505054 CYP2C18P33260 490 aa19.26■□□□□ 0.67
SYNE4-207ENST00000505054 NLRP5P59047 1200 aa19.26■□□□□ 0.67
SYNE4-207ENST00000505054 FSCN1Q16658 493 aaKnown RBP19.26■□□□□ 0.67
SYNE4-207ENST00000505054 CCDC62Q6P9F0 684 aa19.26■□□□□ 0.67
SYNE4-207ENST00000505054 FAM177A1Q8N128 213 aaPredicted RBP19.26■□□□□ 0.67
SYNE4-207ENST00000505054 LLPHQ9BRT6 129 aaKnown RBP19.26■□□□□ 0.67
SYNE4-207ENST00000505054 AP5M1Q9H0R1 490 aa19.26■□□□□ 0.67
SYNE4-207ENST00000505054 KCNJ14Q9UNX9 436 aa19.26■□□□□ 0.67
SYNE4-207ENST00000505054 TNFRSF10AO00220 468 aa19.25■□□□□ 0.67
SYNE4-207ENST00000505054 ITGA7Q13683 1181 aa19.25■□□□□ 0.67
SYNE4-207ENST00000505054 XRRA1Q6P2D8 792 aa19.25■□□□□ 0.67
SYNE4-207ENST00000505054 DAGLBQ8NCG7 672 aa19.25■□□□□ 0.67
SYNE4-207ENST00000505054 BICD2Q8TD16 824 aa19.25■□□□□ 0.67
SYNE4-207ENST00000505054 WASF1Q92558 559 aa19.25■□□□□ 0.67
SYNE4-207ENST00000505054 INPP4AQ96PE3 977 aaPredicted RBP19.25■□□□□ 0.67
SYNE4-207ENST00000505054 PHF20Q9BVI0 1012 aa19.25■□□□□ 0.67
SYNE4-207ENST00000505054 THEGQ9P2T0 379 aa19.25■□□□□ 0.67
SYNE4-207ENST00000505054 PCDHA4Q9UN74 947 aa19.25■□□□□ 0.67
SYNE4-207ENST00000505054 TANC1Q9C0D5 1861 aa19.24■□□□□ 0.67
SYNE4-207ENST00000505054 M0R2N6 131 aa19.24■□□□□ 0.67
SYNE4-207ENST00000505054 STAM2O75886 525 aa19.24■□□□□ 0.67
SYNE4-207ENST00000505054 FGBP02675 491 aa19.24■□□□□ 0.67
SYNE4-207ENST00000505054 TXNP10599 105 aaKnown RBP19.24■□□□□ 0.67
SYNE4-207ENST00000505054 SREBF1P36956 1147 aa19.24■□□□□ 0.67
SYNE4-207ENST00000505054 TTLL4Q14679 1199 aa19.24■□□□□ 0.67
SYNE4-207ENST00000505054 ATXN2LQ8WWM7 1075 aaKnown RBP19.24■□□□□ 0.67
SYNE4-207ENST00000505054 COPS5Q92905 334 aa19.24■□□□□ 0.67
SYNE4-207ENST00000505054 NOC4LQ9BVI4 516 aaKnown RBP19.24■□□□□ 0.67
SYNE4-207ENST00000505054 EHMT1Q9H9B1 1298 aa19.24■□□□□ 0.67
SYNE4-207ENST00000505054 RTEL1Q9NZ71 1219 aa19.24■□□□□ 0.67
SYNE4-207ENST00000505054 CXXC1Q9P0U4 656 aaPredicted RBP19.24■□□□□ 0.67
SYNE4-207ENST00000505054 Q9Y3F1 56 aa19.24■□□□□ 0.67
SYNE4-207ENST00000505054 UMODL1Q5DID0 1318 aa19.24■□□□□ 0.67
SYNE4-207ENST00000505054 CHD7Q9P2D1 2997 aa19.23■□□□□ 0.67
SYNE4-207ENST00000505054 DYNC1LI2O43237 492 aaPredicted RBP19.23■□□□□ 0.67
SYNE4-207ENST00000505054 SEMA3FQ13275 785 aa19.23■□□□□ 0.67
SYNE4-207ENST00000505054 LY6KQ17RY6 165 aa19.23■□□□□ 0.67
SYNE4-207ENST00000505054 BLIDQ8IZY5 108 aa19.23■□□□□ 0.67
SYNE4-207ENST00000505054 CRYGNQ8WXF5 182 aa19.23■□□□□ 0.67
SYNE4-207ENST00000505054 PPM1EQ8WY54 764 aa19.23■□□□□ 0.67
SYNE4-207ENST00000505054 NKX2-4Q9H2Z4 354 aa19.23■□□□□ 0.67
SYNE4-207ENST00000505054 DDX41Q9UJV9 622 aaKnown RBP19.23■□□□□ 0.67
SYNE4-207ENST00000505054 UBIAD1Q9Y5Z9 338 aa19.23■□□□□ 0.67
SYNE4-207ENST00000505054 MRVI1Q9Y6F6 885 aa19.23■□□□□ 0.67
SYNE4-207ENST00000505054 NKRFO15226 690 aaKnown RBP eCLIP19.22■□□□□ 0.676e-6■■□□□ 11.7
SYNE4-207ENST00000505054 B4GALT4O60513 344 aa19.22■□□□□ 0.67
SYNE4-207ENST00000505054 XBP1P17861 261 aa19.22■□□□□ 0.67
SYNE4-207ENST00000505054 ITGB5P18084 799 aa19.22■□□□□ 0.67
SYNE4-207ENST00000505054 FOSBP53539 338 aa19.22■□□□□ 0.67
SYNE4-207ENST00000505054 HMGN5P82970 282 aaKnown RBP19.22■□□□□ 0.67
SYNE4-207ENST00000505054 ARHGAP4P98171 946 aa19.22■□□□□ 0.67
SYNE4-207ENST00000505054 MCTP2Q6DN12 878 aa19.22■□□□□ 0.67
SYNE4-207ENST00000505054 GALNT17Q6IS24 598 aa19.22■□□□□ 0.67
SYNE4-207ENST00000505054 WNT8AQ9H1J5 351 aa19.22■□□□□ 0.67
SYNE4-207ENST00000505054 SLC28A3Q9HAS3 691 aa19.22■□□□□ 0.67
SYNE4-207ENST00000505054 GRIN2DO15399 1336 aa19.22■□□□□ 0.67
SYNE4-207ENST00000505054 KIAA1217Q5T5P2 1943 aa19.21■□□□□ 0.67
SYNE4-207ENST00000505054 SCN10AQ9Y5Y9 1956 aa19.21■□□□□ 0.67
SYNE4-207ENST00000505054 UBA1P22314 1058 aaKnown RBP19.21■□□□□ 0.67
SYNE4-207ENST00000505054 ICAM3P32942 547 aa19.21■□□□□ 0.67
SYNE4-207ENST00000505054 CCL23P55773 120 aa19.21■□□□□ 0.67
SYNE4-207ENST00000505054 SP2Q02086 613 aa19.21■□□□□ 0.67
SYNE4-207ENST00000505054 ARHGAP1Q07960 439 aa19.21■□□□□ 0.67
SYNE4-207ENST00000505054 ADGRE1Q14246 886 aa19.21■□□□□ 0.67
SYNE4-207ENST00000505054 GNPTABQ3T906 1256 aa19.21■□□□□ 0.67
SYNE4-207ENST00000505054 OR6J1Q8NGC5 347 aa19.21■□□□□ 0.67
SYNE4-207ENST00000505054 OXER1Q8TDS5 423 aa19.21■□□□□ 0.67
SYNE4-207ENST00000505054 YBX2Q9Y2T7 364 aaKnown RBP19.21■□□□□ 0.67
SYNE4-207ENST00000505054 SCN5AQ14524 2016 aa19.2■□□□□ 0.66
SYNE4-207ENST00000505054 SPATA31C2B4DYI2 1134 aa19.2■□□□□ 0.66
SYNE4-207ENST00000505054 FIBPO43427 364 aa19.2■□□□□ 0.66
SYNE4-207ENST00000505054 EDIL3O43854 480 aa19.2■□□□□ 0.66
SYNE4-207ENST00000505054 OTOP2Q7RTS6 562 aa19.2■□□□□ 0.66
SYNE4-207ENST00000505054 RPUSD2Q8IZ73 545 aaKnown RBP19.2■□□□□ 0.66
SYNE4-207ENST00000505054 CYP2W1Q8TAV3 490 aa19.2■□□□□ 0.66
SYNE4-207ENST00000505054 GPRASP2Q96D09 838 aa19.2■□□□□ 0.66
SYNE4-207ENST00000505054 ASB2Q96Q27 587 aa19.2■□□□□ 0.66
SYNE4-207ENST00000505054 TRPV6Q9H1D0 765 aa19.2■□□□□ 0.66
SYNE4-207ENST00000505054 GH1P01241 217 aa19.19■□□□□ 0.66
SYNE4-207ENST00000505054 CYP3A4P08684 503 aa19.19■□□□□ 0.66
SYNE4-207ENST00000505054 TGFB3P10600 412 aa19.19■□□□□ 0.66
SYNE4-207ENST00000505054 IGFBP4P22692 258 aa19.19■□□□□ 0.66
SYNE4-207ENST00000505054 PSMC6P62333 389 aa19.19■□□□□ 0.66
SYNE4-207ENST00000505054 CUL4AQ13619 759 aa19.19■□□□□ 0.66
SYNE4-207ENST00000505054 KRT40Q6A162 431 aa19.19■□□□□ 0.66
SYNE4-207ENST00000505054 KCNV1Q6PIU1 500 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms