RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 RRP1P56182 461 aaKnown RBP8.03□□□□□ -1.12
CDH9-202ENST00000505020 ERVK-21P61565 698 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 ZNF267Q14586 743 aaPredicted RBP8.03□□□□□ -1.12
CDH9-202ENST00000505020 ZNF460Q14592 562 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 ANO4Q32M45 955 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 FKBP15Q5T1M5 1219 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 YOD1Q5VVQ6 348 aaPredicted RBP8.03□□□□□ -1.12
CDH9-202ENST00000505020 IQSEC1Q6DN90 963 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 ARHGEF18Q6ZSZ5 1173 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 RUFY3Q7L099 469 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 SV2BQ7L1I2 683 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.03□□□□□ -1.12
CDH9-202ENST00000505020 ALDH16A1Q8IZ83 802 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 KLHL23Q8NBE8 558 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 KIAA1524Q8TCG1 905 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 ASB12Q8WXK4 309 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 KHSRPQ92945 711 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDH9-202ENST00000505020 SLC4A9Q96Q91 983 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 XAB2Q9HCS7 855 aaKnown RBP8.03□□□□□ -1.12
CDH9-202ENST00000505020 BRMS1Q9HCU9 246 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 TCF7L2Q9NQB0 619 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 EXOC1Q9NV70 894 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 RTEL1Q9NZ71 1219 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 KIAA1468Q9P260 1216 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 CLIP2Q9UDT6 1046 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 C19orf53Q9UNZ5 99 aaPredicted RBP8.03□□□□□ -1.12
CDH9-202ENST00000505020 PCDHGB5Q9Y5G0 923 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 USP3Q9Y6I4 520 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 CCDC69A6NI79 296 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 H0YC42 278 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 K7ESF4 209 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 ZBTB43O43298 467 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 NEMFO60524 1076 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 PHACTR2O75167 634 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 ZPR1O75312 459 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 TADA3O75528 432 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 POU2F2P09086 479 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 EEF2P13639 858 aaKnown RBP8.03□□□□□ -1.12
CDH9-202ENST00000505020 PTPREP23469 700 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 HDGFP51858 240 aaKnown RBP8.03□□□□□ -1.12
CDH9-202ENST00000505020 NSUN2Q08J23 767 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDH9-202ENST00000505020 BLMHQ13867 455 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 ZNF423Q2M1K9 1284 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 ZNF362Q5T0B9 420 aaPredicted RBP8.03□□□□□ -1.12
CDH9-202ENST00000505020 CCDC91Q7Z6B0 441 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 RALYLQ86SE5 291 aaKnown RBP8.03□□□□□ -1.12
CDH9-202ENST00000505020 TTC6Q86TZ1 520 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 RBBP8NLQ8NC74 664 aaPredicted RBP8.03□□□□□ -1.12
CDH9-202ENST00000505020 NACC2Q96BF6 587 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 SLC10A4Q96EP9 437 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 TRIM11Q96F44 468 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 FSD1Q9BTV5 496 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 BCL2L12Q9HB09 334 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 WASH6PQ9NQA3 447 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 AIPL1Q9NZN9 384 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 TNPO3Q9Y5L0 923 aaKnown RBP8.03□□□□□ -1.12
CDH9-202ENST00000505020 SLC7A4O43246 635 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 SASH1O94885 1247 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 RPLP1P05386 114 aaKnown RBP8.02□□□□□ -1.13
CDH9-202ENST00000505020 MYCLP12524 364 aaPredicted RBP8.02□□□□□ -1.13
CDH9-202ENST00000505020 ACTN2P35609 894 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 MTHFRP42898 656 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 SESN3P58005 492 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 HTRA3P83110 453 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 MBTPS1Q14703 1052 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 OASLQ15646 514 aaKnown RBP8.02□□□□□ -1.13
CDH9-202ENST00000505020 UTP14CQ5TAP6 766 aaKnown RBP8.02□□□□□ -1.13
CDH9-202ENST00000505020 LIN54Q6MZP7 749 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 TPTE2Q6XPS3 522 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 MYOCDQ8IZQ8 938 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 VPS52Q8N1B4 723 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 LRRC71Q8N4P6 559 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 ZSCAN18Q8TBC5 510 aaPredicted RBP8.02□□□□□ -1.13
CDH9-202ENST00000505020 BTN2A2Q8WVV5 523 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 ZSCAN31Q96LW9 406 aaPredicted RBP8.02□□□□□ -1.13
CDH9-202ENST00000505020 LRRC3Q9BY71 257 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 SIL1Q9H173 461 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 PPP4R2Q9NY27 417 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 ROBO2Q9HCK4 1378 aa8.02□□□□□ -1.13
CDH9-202ENST00000505020 A0A1W2PPH5 198 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 BTBD11A6QL63 1104 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 RNF40O75150 1001 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 STAM2O75886 525 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 STARD3NLO95772 234 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 CCDC172P0C7W6 258 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 GUCY2CP25092 1073 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 PBLDP30039 288 aaPredicted RBP8.01□□□□□ -1.13
CDH9-202ENST00000505020 MAGEA8P43361 318 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 ATN1P54259 1190 aaPredicted RBP8.01□□□□□ -1.13
CDH9-202ENST00000505020 DGKKQ5KSL6 1271 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 TTC39AQ5SRH9 613 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 SYNE3Q6ZMZ3 975 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 KIAA1211Q6ZU35 1233 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 ZBTB34Q8NCN2 500 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 CFAP36Q96G28 342 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 FAXDC2Q96IV6 333 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 CNDP1Q96KN2 507 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 RNF38Q9H0F5 515 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 TRIM39Q9HCM9 518 aa8.01□□□□□ -1.13
CDH9-202ENST00000505020 VTA1Q9NP79 307 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms