RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 NDST4Q9H3R1 872 aa17.13■□□□□ 0.33
SNCAIP-207ENST00000504884 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-207ENST00000504884 EPN1Q9Y6I3 576 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-207ENST00000504884 A0A1W2PQJ5 194 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 NFKBIEO00221 500 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 KIF5CO60282 957 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 ZBED6P86452 979 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 ZCWPW2Q504Y3 356 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 LRRC55Q6ZSA7 311 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 CCDC84Q86UT8 332 aaPredicted RBP17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 PDCL2Q8N4E4 241 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 GLIS3Q8NEA6 775 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 LPAR1Q92633 364 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 WDR24Q96S15 920 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 ZNF341Q9BYN7 854 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 LZTFL1Q9NQ48 299 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 ZNHIT6Q9NWK9 470 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 NPHP3-ACAD11A0A0J9YXS1 232 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 SHTN1A0MZ66 631 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 RASSF10A6NK89 507 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 FANCGO15287 622 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 GNA14O95837 355 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 PSMC6P62333 389 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 NAA30Q147X3 362 aaPredicted RBP17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 OTOP1Q7RTM1 612 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 PRPF38AQ8NAV1 312 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 CEP63Q96MT8 703 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 TEPSINQ96N21 525 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 CHP1Q99653 195 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 EIF2AK1Q9BQI3 630 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 EMILIN3Q9NT22 766 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 FBXO28Q9NVF7 368 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 RABGAP1Q9Y3P9 1069 aa17.12■□□□□ 0.33
SNCAIP-207ENST00000504884 TRAF5O00463 557 aa17.11■□□□□ 0.33
SNCAIP-207ENST00000504884 CTNND1O60716 968 aaKnown RBP17.11■□□□□ 0.33
SNCAIP-207ENST00000504884 ICAM1P05362 532 aa17.11■□□□□ 0.33
SNCAIP-207ENST00000504884 MAP3K9P80192 1104 aa17.11■□□□□ 0.33
SNCAIP-207ENST00000504884 PABPC4Q13310 644 aaKnown RBP eCLIP17.11■□□□□ 0.33
SNCAIP-207ENST00000504884 GIT2Q14161 759 aa17.11■□□□□ 0.33
SNCAIP-207ENST00000504884 MEA1Q16626 185 aa17.11■□□□□ 0.33
SNCAIP-207ENST00000504884 FER1L6Q2WGJ9 1857 aa17.11■□□□□ 0.33
SNCAIP-207ENST00000504884 ARHGAP29Q52LW3 1261 aa17.11■□□□□ 0.33
SNCAIP-207ENST00000504884 CEP55Q53EZ4 464 aa17.11■□□□□ 0.33
SNCAIP-207ENST00000504884 TUFT1Q9NNX1 390 aa17.11■□□□□ 0.33
SNCAIP-207ENST00000504884 TBC1D7Q9P0N9 293 aa17.11■□□□□ 0.33
SNCAIP-207ENST00000504884 CGNQ9P2M7 1197 aaKnown RBP17.11■□□□□ 0.33
SNCAIP-207ENST00000504884 SMCHD1A6NHR9 2005 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 GOLGB1Q14789 3259 aaKnown RBP17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 MEIS1O00470 390 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 WDR46O15213 610 aaKnown RBP17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 PSMD10O75832 226 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 NDUFA10O95299 355 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 EYA4O95677 639 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 INPP5BP32019 993 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 PPP2R5CQ13362 524 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 WDR59Q6PJI9 974 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 SAMD1Q6SPF0 538 aaPredicted RBP17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 SLC5A5Q92911 643 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 WDR18Q9BV38 432 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 KIAA1683Q9H0B3 1180 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 AGPAT5Q9NUQ2 364 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 COL4A3BPQ9Y5P4 624 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 EML1O00423 815 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 LRCH2Q5VUJ6 765 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 PPP4R3CPQ6ZMV5 832 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 ACRBPQ8NEB7 543 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 SCFD1Q8WVM8 642 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 HSD17B14Q9BPX1 270 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 SLF1Q9BQI6 1058 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 ZHX3Q9H4I2 956 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 MYO1AQ9UBC5 1043 aa17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 PPP1R1BQ9UD71 204 aaPredicted RBP17.1■□□□□ 0.33
SNCAIP-207ENST00000504884 LTBP3Q9NS15 1303 aa17.09■□□□□ 0.33
SNCAIP-207ENST00000504884 MUTP22033 750 aa17.09■□□□□ 0.33
SNCAIP-207ENST00000504884 KLK7P49862 253 aa17.09■□□□□ 0.33
SNCAIP-207ENST00000504884 CDK17Q00537 523 aa17.09■□□□□ 0.33
SNCAIP-207ENST00000504884 SETQ01105 290 aaPredicted RBP17.09■□□□□ 0.33
SNCAIP-207ENST00000504884 CACNB1Q02641 598 aaPredicted RBP17.09■□□□□ 0.33
SNCAIP-207ENST00000504884 CYP4A11Q02928 519 aa17.09■□□□□ 0.33
SNCAIP-207ENST00000504884 RAD51AP2Q09MP3 1159 aa17.09■□□□□ 0.33
SNCAIP-207ENST00000504884 CCDC170Q8IYT3 715 aa17.09■□□□□ 0.33
SNCAIP-207ENST00000504884 MNS1Q8NEH6 495 aa17.09■□□□□ 0.33
SNCAIP-207ENST00000504884 WDR11Q9BZH6 1224 aa17.09■□□□□ 0.33
SNCAIP-207ENST00000504884 IRX2Q9BZI1 471 aaPredicted RBP17.09■□□□□ 0.33
SNCAIP-207ENST00000504884 KCTD10Q9H3F6 313 aa17.09■□□□□ 0.33
SNCAIP-207ENST00000504884 CCPG1Q9ULG6 757 aa17.09■□□□□ 0.33
SNCAIP-207ENST00000504884 SIK3Q9Y2K2 1263 aa17.09■□□□□ 0.33
SNCAIP-207ENST00000504884 CD2APQ9Y5K6 639 aa17.09■□□□□ 0.33
SNCAIP-207ENST00000504884 NKRFO15226 690 aaKnown RBP eCLIP17.08■□□□□ 0.33
SNCAIP-207ENST00000504884 EGFRP00533 1210 aa17.08■□□□□ 0.33
SNCAIP-207ENST00000504884 CYLC1P35663 651 aaPredicted RBP17.08■□□□□ 0.33
SNCAIP-207ENST00000504884 HSD17B4P51659 736 aa17.08■□□□□ 0.33
SNCAIP-207ENST00000504884 KRT83P78385 493 aa17.08■□□□□ 0.33
SNCAIP-207ENST00000504884 TUBB2AQ13885 445 aa17.08■□□□□ 0.33
SNCAIP-207ENST00000504884 EDRF1Q3B7T1 1238 aa17.08■□□□□ 0.33
SNCAIP-207ENST00000504884 KRT26Q7Z3Y9 468 aa17.08■□□□□ 0.33
SNCAIP-207ENST00000504884 MCF2L2Q86YR7 1114 aa17.08■□□□□ 0.33
SNCAIP-207ENST00000504884 MICALL2Q8IY33 904 aa17.08■□□□□ 0.33
SNCAIP-207ENST00000504884 AGBL1Q96MI9 1066 aa17.08■□□□□ 0.33
SNCAIP-207ENST00000504884 TUBB2BQ9BVA1 445 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms