RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 RETREG3Q86VR2 466 aa10.63□□□□□ -0.71
DHFR-202ENST00000504396 TICAM2Q86XR7 235 aa10.63□□□□□ -0.71
DHFR-202ENST00000504396 OTUD7AQ8TE49 926 aaPredicted RBP10.63□□□□□ -0.71
DHFR-202ENST00000504396 LRFN3Q9BTN0 628 aa10.63□□□□□ -0.71
DHFR-202ENST00000504396 MAF1Q9H063 256 aa10.63□□□□□ -0.71
DHFR-202ENST00000504396 ANAPC4Q9UJX5 808 aa10.63□□□□□ -0.71
DHFR-202ENST00000504396 PRRC2BQ5JSZ5 2229 aaKnown RBP10.62□□□□□ -0.71
DHFR-202ENST00000504396 ORC4O43929 436 aa10.62□□□□□ -0.71
DHFR-202ENST00000504396 MX1P20591 662 aa10.62□□□□□ -0.71
DHFR-202ENST00000504396 WDR5P61964 334 aaKnown RBP10.62□□□□□ -0.71
DHFR-202ENST00000504396 PTPN11Q06124 597 aaPredicted RBP10.62□□□□□ -0.71
DHFR-202ENST00000504396 VPS53Q5VIR6 699 aa10.62□□□□□ -0.71
DHFR-202ENST00000504396 FAM117BQ6P1L5 589 aa10.62□□□□□ -0.71
DHFR-202ENST00000504396 SEPT14Q6ZU15 432 aa10.62□□□□□ -0.71
DHFR-202ENST00000504396 LRRC8DQ7L1W4 858 aa10.62□□□□□ -0.71
DHFR-202ENST00000504396 SPRED2Q7Z698 418 aa10.62□□□□□ -0.71
DHFR-202ENST00000504396 CAGE1Q8TC20 777 aa10.62□□□□□ -0.71
DHFR-202ENST00000504396 PI4K2BQ8TCG2 481 aa10.62□□□□□ -0.71
DHFR-202ENST00000504396 CLEC4DQ8WXI8 215 aa10.62□□□□□ -0.71
DHFR-202ENST00000504396 TMEM47Q9BQJ4 181 aa10.62□□□□□ -0.71
DHFR-202ENST00000504396 PTPRSQ13332 1948 aa10.61□□□□□ -0.71
DHFR-202ENST00000504396 LCHNA4D1U4 455 aa10.61□□□□□ -0.71
DHFR-202ENST00000504396 A6NJR5 290 aa10.61□□□□□ -0.71
DHFR-202ENST00000504396 NRG2O14511 850 aaPredicted RBP10.61□□□□□ -0.71
DHFR-202ENST00000504396 FGRP09769 529 aa10.61□□□□□ -0.71
DHFR-202ENST00000504396 PDHBP11177 359 aa10.61□□□□□ -0.71
DHFR-202ENST00000504396 DNERQ8NFT8 737 aa10.61□□□□□ -0.71
DHFR-202ENST00000504396 AFAP1L1Q8TED9 768 aa10.61□□□□□ -0.71
DHFR-202ENST00000504396 AFG1LQ8WV93 481 aa10.61□□□□□ -0.71
DHFR-202ENST00000504396 WDR19Q8NEZ3 1342 aa10.61□□□□□ -0.71
DHFR-202ENST00000504396 TRIP12Q14669 1992 aaPredicted RBP10.61□□□□□ -0.71
DHFR-202ENST00000504396 FOXP2O15409 715 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 DHX16O60231 1041 aaKnown RBP10.6□□□□□ -0.71
DHFR-202ENST00000504396 ARIH2O95376 493 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 MMP3P08254 477 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 SELPP16109 830 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 JUNDP17535 347 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 RPIAP49247 311 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 NT5C2P49902 561 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 HAND2P61296 217 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 DEFB103AP81534 67 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 ALX1Q15699 326 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 LY6KQ17RY6 165 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 GDF6Q6KF10 455 aaPredicted RBP10.6□□□□□ -0.71
DHFR-202ENST00000504396 CNKSR3Q6P9H4 555 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 C7orf31Q8N865 590 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 ALG1Q9BT22 464 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 TCP11L1Q9NUJ3 509 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 ZMYM6O95789 1325 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 BDP1A6H8Y1 2624 aa10.6□□□□□ -0.71
DHFR-202ENST00000504396 LPXNO60711 386 aa10.59□□□□□ -0.71
DHFR-202ENST00000504396 GH1P01241 217 aa10.59□□□□□ -0.71
DHFR-202ENST00000504396 GOLGA8HP0CJ92 632 aa10.59□□□□□ -0.71
DHFR-202ENST00000504396 PCP11498 1178 aaKnown RBP10.59□□□□□ -0.71
DHFR-202ENST00000504396 CASTP20810 708 aaKnown RBP10.59□□□□□ -0.71
DHFR-202ENST00000504396 EDNRBP24530 442 aa10.59□□□□□ -0.71
DHFR-202ENST00000504396 ZNF543Q08ER8 600 aa10.59□□□□□ -0.71
DHFR-202ENST00000504396 DHX37Q8IY37 1157 aaKnown RBP10.59□□□□□ -0.71
DHFR-202ENST00000504396 TTC14Q96N46 770 aa10.59□□□□□ -0.71
DHFR-202ENST00000504396 TGS1Q96RS0 853 aaKnown RBP10.59□□□□□ -0.71
DHFR-202ENST00000504396 PCDHB15Q9Y5E8 787 aa10.59□□□□□ -0.71
DHFR-202ENST00000504396 SIP14410 1827 aa10.59□□□□□ -0.71
DHFR-202ENST00000504396 TET1Q8NFU7 2136 aa10.59□□□□□ -0.71
DHFR-202ENST00000504396 ZBTB24O43167 697 aaPredicted RBP10.58□□□□□ -0.72
DHFR-202ENST00000504396 PARNO95453 639 aaKnown RBP10.58□□□□□ -0.72
DHFR-202ENST00000504396 ZNF286BP0CG31 522 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 CKBP12277 381 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 KCNA5P22460 613 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 IKBKEQ14164 716 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 CDC37Q16543 378 aaPredicted RBP10.58□□□□□ -0.72
DHFR-202ENST00000504396 DGKDQ16760 1214 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 MFSD6Q6ZSS7 791 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 EP400NLQ6ZTU2 488 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 RGS22Q8NE09 1264 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 EVI5LQ96CN4 794 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 UIMC1Q96RL1 719 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 ZKSCAN3Q9BRR0 538 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 KATNAL1Q9BW62 490 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 CPVLQ9H3G5 476 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 UBE2ZQ9H832 354 aaPredicted RBP10.58□□□□□ -0.72
DHFR-202ENST00000504396 HELLSQ9NRZ9 838 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 KIAA1217Q5T5P2 1943 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 ABHD14A-ACY1A0A1B0GW23 586 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 SPTLC1O15269 473 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 SORBS3O60504 671 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 NBNO60934 754 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 GJB5O95377 273 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 FGAP02671 866 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 EIF2AK2P19525 551 aaKnown RBP10.58□□□□□ -0.72
DHFR-202ENST00000504396 ARHGAP1Q07960 439 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 STXBP2Q15833 593 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 CSPP1Q1MSJ5 1256 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 GPATCH4Q5T3I0 446 aaKnown RBP10.58□□□□□ -0.72
DHFR-202ENST00000504396 ARHGEF16Q5VV41 709 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 MYSM1Q5VVJ2 828 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 NSUN6Q8TEA1 469 aaKnown RBP10.58□□□□□ -0.72
DHFR-202ENST00000504396 DHX38Q92620 1227 aaKnown RBP10.58□□□□□ -0.72
DHFR-202ENST00000504396 FAM227BQ96M60 508 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 RAD9AQ99638 391 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 UBA5Q9GZZ9 404 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms