RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 NFASCO94856 1347 aa20.62■□□□□ 0.89
DDR1-252ENST00000504152 KIF28PB7ZC32 967 aa20.62■□□□□ 0.89
DDR1-252ENST00000504152 IPO5O00410 1097 aaKnown RBP20.62■□□□□ 0.89
DDR1-252ENST00000504152 CTAGE5O15320 804 aa20.62■□□□□ 0.89
DDR1-252ENST00000504152 STX6O43752 255 aa20.62■□□□□ 0.89
DDR1-252ENST00000504152 TDP2O95551 362 aa20.62■□□□□ 0.89
DDR1-252ENST00000504152 ATP2B1P20020 1258 aa20.62■□□□□ 0.89
DDR1-252ENST00000504152 TRAPPC10P48553 1259 aa20.62■□□□□ 0.89
DDR1-252ENST00000504152 PRPF38BQ5VTL8 546 aaKnown RBP20.62■□□□□ 0.89
DDR1-252ENST00000504152 NECAB2Q7Z6G3 386 aa20.62■□□□□ 0.89
DDR1-252ENST00000504152 AFG1LQ8WV93 481 aa20.62■□□□□ 0.89
DDR1-252ENST00000504152 BCAS3Q9H6U6 928 aa20.62■□□□□ 0.89
DDR1-252ENST00000504152 TBC1D22BQ9NU19 505 aa20.62■□□□□ 0.89
DDR1-252ENST00000504152 POLR3EQ9NVU0 708 aa20.62■□□□□ 0.89
DDR1-252ENST00000504152 FRMPD3Q5JV73 1810 aa20.62■□□□□ 0.89
DDR1-252ENST00000504152 MYADML2A6NDP7 307 aa20.61■□□□□ 0.89
DDR1-252ENST00000504152 MOXD2PA6NHM9 499 aa20.61■□□□□ 0.89
DDR1-252ENST00000504152 NOP56O00567 594 aaKnown RBP20.61■□□□□ 0.89
DDR1-252ENST00000504152 MARCH6O60337 910 aa20.61■□□□□ 0.89
DDR1-252ENST00000504152 SORBS3O60504 671 aa20.61■□□□□ 0.89
DDR1-252ENST00000504152 PPFIA4O75335 1185 aa20.61■□□□□ 0.89
DDR1-252ENST00000504152 FARP2O94887 1054 aaPredicted RBP20.61■□□□□ 0.89
DDR1-252ENST00000504152 IRX5P78411 483 aaPredicted RBP20.61■□□□□ 0.89
DDR1-252ENST00000504152 CCSAPQ6IQ19 270 aaPredicted RBP20.61■□□□□ 0.89
DDR1-252ENST00000504152 PPTC7Q8NI37 304 aa20.61■□□□□ 0.89
DDR1-252ENST00000504152 LENG9Q96B70 501 aa20.61■□□□□ 0.89
DDR1-252ENST00000504152 PAWRQ96IZ0 340 aaKnown RBP20.61■□□□□ 0.89
DDR1-252ENST00000504152 DAXXQ9UER7 740 aaPredicted RBP20.61■□□□□ 0.89
DDR1-252ENST00000504152 BRCA2P51587 3418 aa20.61■□□□□ 0.89
DDR1-252ENST00000504152 MSH4O15457 936 aa20.6■□□□□ 0.89
DDR1-252ENST00000504152 BAG4O95429 457 aaKnown RBP20.6■□□□□ 0.89
DDR1-252ENST00000504152 ASGR1P07306 291 aa20.6■□□□□ 0.89
DDR1-252ENST00000504152 ANP32AP39687 249 aaKnown RBP20.6■□□□□ 0.89
DDR1-252ENST00000504152 MNX1P50219 401 aaPredicted RBP20.6■□□□□ 0.89
DDR1-252ENST00000504152 ACLYP53396 1101 aa20.6■□□□□ 0.89
DDR1-252ENST00000504152 DGKDQ16760 1214 aa20.6■□□□□ 0.89
DDR1-252ENST00000504152 HSDL1Q3SXM5 330 aa20.6■□□□□ 0.89
DDR1-252ENST00000504152 BRAPQ7Z569 592 aa20.6■□□□□ 0.89
DDR1-252ENST00000504152 VTI1AQ96AJ9 217 aa20.6■□□□□ 0.89
DDR1-252ENST00000504152 FAM20AQ96MK3 541 aa20.6■□□□□ 0.89
DDR1-252ENST00000504152 SENP6Q9GZR1 1112 aaPredicted RBP20.6■□□□□ 0.89
DDR1-252ENST00000504152 SLC9A2Q9UBY0 812 aa20.6■□□□□ 0.89
DDR1-252ENST00000504152 PHF24Q9UPV7 400 aa20.6■□□□□ 0.89
DDR1-252ENST00000504152 TBX3O15119 743 aa20.59■□□□□ 0.89
DDR1-252ENST00000504152 CABYRO75952 493 aa20.59■□□□□ 0.89
DDR1-252ENST00000504152 MYL3P08590 195 aa20.59■□□□□ 0.89
DDR1-252ENST00000504152 ITGB3BPQ13352 177 aaPredicted RBP20.59■□□□□ 0.89
DDR1-252ENST00000504152 RILPL1Q5EBL4 403 aa20.59■□□□□ 0.89
DDR1-252ENST00000504152 SEPT1Q8WYJ6 367 aa20.59■□□□□ 0.89
DDR1-252ENST00000504152 UIMC1Q96RL1 719 aa20.59■□□□□ 0.89
DDR1-252ENST00000504152 RIT2Q99578 217 aa20.59■□□□□ 0.89
DDR1-252ENST00000504152 C11orf49Q9H6J7 331 aa20.59■□□□□ 0.89
DDR1-252ENST00000504152 JPH1Q9HDC5 661 aaPredicted RBP20.59■□□□□ 0.89
DDR1-252ENST00000504152 TCEAL9Q9UHQ7 104 aa20.59■□□□□ 0.89
DDR1-252ENST00000504152 MTMR6Q9Y217 621 aa20.59■□□□□ 0.89
DDR1-252ENST00000504152 DHX15O43143 795 aaKnown RBP20.58■□□□□ 0.89
DDR1-252ENST00000504152 MMP3P08254 477 aa20.58■□□□□ 0.89
DDR1-252ENST00000504152 ORC2Q13416 577 aaPredicted RBP20.58■□□□□ 0.89
DDR1-252ENST00000504152 TTC38Q5R3I4 469 aa20.58■□□□□ 0.89
DDR1-252ENST00000504152 SLC5A5Q92911 643 aa20.58■□□□□ 0.89
DDR1-252ENST00000504152 FERMT2Q96AC1 680 aa20.58■□□□□ 0.89
DDR1-252ENST00000504152 GLT1D1Q96MS3 346 aa20.58■□□□□ 0.89
DDR1-252ENST00000504152 GPR20Q99678 358 aa20.58■□□□□ 0.89
DDR1-252ENST00000504152 ZSCAN16Q9H4T2 348 aaPredicted RBP20.58■□□□□ 0.89
DDR1-252ENST00000504152 SLC37A4O43826 429 aa20.57■□□□□ 0.88
DDR1-252ENST00000504152 NEMFO60524 1076 aa20.57■□□□□ 0.88
DDR1-252ENST00000504152 GAS7O60861 476 aa20.57■□□□□ 0.88
DDR1-252ENST00000504152 MCM7P33993 719 aa20.57■□□□□ 0.88
DDR1-252ENST00000504152 SP4Q02446 784 aa20.57■□□□□ 0.88
DDR1-252ENST00000504152 ZNF174Q15697 407 aa20.57■□□□□ 0.88
DDR1-252ENST00000504152 LRCH2Q5VUJ6 765 aa20.57■□□□□ 0.88
DDR1-252ENST00000504152 FERMT3Q86UX7 667 aa20.57■□□□□ 0.88
DDR1-252ENST00000504152 SLFN12Q8IYM2 578 aa20.57■□□□□ 0.88
DDR1-252ENST00000504152 DIS3LQ8TF46 1054 aaKnown RBP20.57■□□□□ 0.88
DDR1-252ENST00000504152 MTG1Q9BT17 334 aaPredicted RBP20.57■□□□□ 0.88
DDR1-252ENST00000504152 DOCK5Q9H7D0 1870 aa20.56■□□□□ 0.88
DDR1-252ENST00000504152 A0A1W2PQ45 241 aaPredicted RBP20.56■□□□□ 0.88
DDR1-252ENST00000504152 A0A1W2PQY0 241 aa20.56■□□□□ 0.88
DDR1-252ENST00000504152 DDX39AO00148 427 aaKnown RBP20.56■□□□□ 0.88
DDR1-252ENST00000504152 COL6A1P12109 1028 aa20.56■□□□□ 0.88
DDR1-252ENST00000504152 TOB1P50616 345 aaPredicted RBP20.56■□□□□ 0.88
DDR1-252ENST00000504152 PURAQ00577 322 aaKnown RBP20.56■□□□□ 0.88
DDR1-252ENST00000504152 KRT76Q01546 638 aa20.56■□□□□ 0.88
DDR1-252ENST00000504152 CALCRLQ16602 461 aa20.56■□□□□ 0.88
DDR1-252ENST00000504152 CXCL17Q6UXB2 119 aa20.56■□□□□ 0.88
DDR1-252ENST00000504152 UBE2Q1Q7Z7E8 422 aa20.56■□□□□ 0.88
DDR1-252ENST00000504152 ETNPPLQ8TBG4 499 aa20.56■□□□□ 0.88
DDR1-252ENST00000504152 TEKT3Q9BXF9 490 aa20.56■□□□□ 0.88
DDR1-252ENST00000504152 KCNMB3Q9NPA1 279 aa20.56■□□□□ 0.88
DDR1-252ENST00000504152 ELP1O95163 1332 aa20.55■□□□□ 0.88
DDR1-252ENST00000504152 GSTTP1A0A1W2PQM5 241 aa20.55■□□□□ 0.88
DDR1-252ENST00000504152 PSMD10O75832 226 aa20.55■□□□□ 0.88
DDR1-252ENST00000504152 ACTR2P61160 394 aa20.55■□□□□ 0.88
DDR1-252ENST00000504152 ZNF746Q6NUN9 644 aaPredicted RBP20.55■□□□□ 0.88
DDR1-252ENST00000504152 POTEDQ86YR6 584 aa20.55■□□□□ 0.88
DDR1-252ENST00000504152 STARD7Q9NQZ5 370 aa20.55■□□□□ 0.88
DDR1-252ENST00000504152 WNT7AO00755 349 aa20.54■□□□□ 0.88
DDR1-252ENST00000504152 ATG7O95352 703 aa20.54■□□□□ 0.88
DDR1-252ENST00000504152 HOXD8P13378 290 aaPredicted RBP20.54■□□□□ 0.88
DDR1-252ENST00000504152 TCF7P36402 384 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms