RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 ISCUQ9H1K1 167 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 CARD9Q9H257 536 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 DCLRE1BQ9H816 532 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 ECT2Q9H8V3 914 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 MIS18AQ9NYP9 233 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 CABP1Q9NZU7 370 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 DLGAP2Q9P1A6 1054 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 STOML1Q9UBI4 398 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 KCNH3Q9ULD8 1083 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 CAPN11Q9UMQ6 739 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 MAPK8IP1Q9UQF2 711 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 LUC7L2Q9Y383 392 aaKnown RBP6.52□□□□□ -1.37
LINC01340-201ENST00000504012 TTLL3Q9Y4R7 772 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 KIF20BQ96Q89 1820 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 NEO1Q92859 1461 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 CRB1P82279 1406 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 MROH1Q8NDA8 1641 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 SMIM31A0A1B0GVY4 71 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 SIGLEC16A6NMB1 481 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 PJA2O43164 708 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 STK10O94804 968 aaKnown RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 SUN1O94901 812 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 LCA5LO95447 670 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 GJB6O95452 261 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 EYA4O95677 639 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 ABL1P00519 1130 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 EIF2S1P05198 315 aaKnown RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 PABPC4LP0CB38 370 aaKnown RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 POTEJP0CG39 1038 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 ZNF16P17020 682 aaPredicted RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 EIF2S2P20042 333 aaKnown RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 S100A1P23297 94 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 STIP1P31948 543 aaKnown RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 HOXD12P35452 270 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 VHLP40337 213 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 RFC5P40937 340 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 CACNA2D1P54289 1103 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 RPL26P61254 145 aaKnown RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 USP46P62068 366 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 KCNJ2P63252 427 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 MCL1Q07820 350 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 PDAP1Q13442 181 aaKnown RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 CNPY1Q3B7I2 92 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 PUS10Q3MIT2 529 aaKnown RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 CCDC153Q494R4 210 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 TBC1D10BQ4KMP7 808 aaPredicted RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 PDCD4Q53EL6 469 aaKnown RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 FIGNQ5HY92 759 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 CFAP157Q5JU67 520 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 AKNAD1Q5T1N1 836 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 SLC9C2Q5TAH2 1124 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 RNF220Q5VTB9 566 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 ARHGAP27Q6ZUM4 889 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 PPP1R42Q7Z4L9 355 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 SLC15A3Q8IY34 581 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 SPICE1Q8N0Z3 855 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 PPP1R14CQ8TAE6 165 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 LENG1Q96BZ8 264 aaPredicted RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 GRAMD1AQ96CP6 724 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 PGM2Q96G03 612 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 GSDMAQ96QA5 445 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 MED15Q96RN5 788 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 TCHPQ9BT92 498 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 TMEM109Q9BVC6 243 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 MAK16Q9BXY0 300 aaKnown RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 STMN4Q9H169 189 aaPredicted RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 GGNBP2Q9H3C7 697 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 RXFP1Q9HBX9 757 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 IL1RAPL2Q9NP60 686 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 TIMMDC1Q9NPL8 285 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 SAMSN1Q9NSI8 373 aaKnown RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 TXLNGQ9NUQ3 528 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 SCHIP1Q9P0W5 487 aaPredicted RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 FBXO9Q9UK97 447 aaPredicted RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 SSX2IPQ9Y2D8 614 aa6.51□□□□□ -1.37
LINC01340-201ENST00000504012 USP15Q9Y4E8 981 aaPredicted RBP6.51□□□□□ -1.37
LINC01340-201ENST00000504012 MED1Q15648 1581 aaPredicted RBP6.5□□□□□ -1.37
LINC01340-201ENST00000504012 BCL9LQ86UU0 1499 aa6.5□□□□□ -1.37
LINC01340-201ENST00000504012 A0A1W2PQJ5 194 aa6.5□□□□□ -1.37
LINC01340-201ENST00000504012 TLDC2A0PJX2 215 aa6.5□□□□□ -1.37
LINC01340-201ENST00000504012 BICDL2A1A5D9 508 aa6.5□□□□□ -1.37
LINC01340-201ENST00000504012 POTEFA5A3E0 1075 aa6.5□□□□□ -1.37
LINC01340-201ENST00000504012 PHF20L1A8MW92 1017 aa6.5□□□□□ -1.37
LINC01340-201ENST00000504012 TRAFD1O14545 582 aaPredicted RBP6.5□□□□□ -1.37
LINC01340-201ENST00000504012 ENC1O14682 589 aa6.5□□□□□ -1.37
LINC01340-201ENST00000504012 CETN3O15182 167 aa6.5□□□□□ -1.37
LINC01340-201ENST00000504012 NVLO15381 856 aaKnown RBP6.5□□□□□ -1.37
LINC01340-201ENST00000504012 SNX3O60493 162 aa6.5□□□□□ -1.37
LINC01340-201ENST00000504012 SRGAP2O75044 1071 aa6.5□□□□□ -1.37
LINC01340-201ENST00000504012 UBOX5O94941 541 aa6.5□□□□□ -1.37
LINC01340-201ENST00000504012 TJP3O95049 919 aa6.5□□□□□ -1.37
LINC01340-201ENST00000504012 ITGA2BP08514 1039 aa6.5□□□□□ -1.37
LINC01340-201ENST00000504012 KRT16P08779 473 aa6.5□□□□□ -1.37
LINC01340-201ENST00000504012 FDPSP14324 419 aaKnown RBP6.5□□□□□ -1.37
LINC01340-201ENST00000504012 ALOX15P16050 662 aaPredicted RBP6.5□□□□□ -1.37
LINC01340-201ENST00000504012 PORP16435 677 aaPredicted RBP6.5□□□□□ -1.37
LINC01340-201ENST00000504012 TRIM21P19474 475 aaKnown RBP6.5□□□□□ -1.37
LINC01340-201ENST00000504012 PDIA3P30101 505 aaKnown RBP6.5□□□□□ -1.37
LINC01340-201ENST00000504012 CDC27P30260 824 aa6.5□□□□□ -1.37
LINC01340-201ENST00000504012 HOXA10P31260 410 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms