RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 SH3TC2Q8TF17 1288 aa6.54□□□□□ -1.36
UBE3D-205ENST00000503942 SEC14L1Q92503 715 aa6.54□□□□□ -1.36
UBE3D-205ENST00000503942 YTHDC1Q96MU7 727 aaKnown RBP6.54□□□□□ -1.36
UBE3D-205ENST00000503942 DEF6Q9H4E7 631 aa6.54□□□□□ -1.36
UBE3D-205ENST00000503942 MARCH2Q9P0N8 246 aa6.54□□□□□ -1.36
UBE3D-205ENST00000503942 ING1Q9UK53 422 aaPredicted RBP6.54□□□□□ -1.36
UBE3D-205ENST00000503942 TMA7Q9Y2S6 64 aaKnown RBP6.54□□□□□ -1.36
UBE3D-205ENST00000503942 HS3ST3A1Q9Y663 406 aa6.54□□□□□ -1.36
UBE3D-205ENST00000503942 KDM2BQ8NHM5 1336 aa6.53□□□□□ -1.36
UBE3D-205ENST00000503942 PATE3B3GLJ2 98 aa6.53□□□□□ -1.36
UBE3D-205ENST00000503942 ADCY3O60266 1144 aa6.53□□□□□ -1.36
UBE3D-205ENST00000503942 PPM1BO75688 479 aa6.53□□□□□ -1.36
UBE3D-205ENST00000503942 CAPNS1P04632 268 aa6.53□□□□□ -1.36
UBE3D-205ENST00000503942 CYP1A1P04798 512 aaPredicted RBP6.53□□□□□ -1.36
UBE3D-205ENST00000503942 SLC6A11P48066 632 aa6.53□□□□□ -1.36
UBE3D-205ENST00000503942 PRAMEF18Q5VWM3 479 aa6.53□□□□□ -1.36
UBE3D-205ENST00000503942 SDE2Q6IQ49 451 aa6.53□□□□□ -1.36
UBE3D-205ENST00000503942 ADAT2Q7Z6V5 191 aaKnown RBP6.53□□□□□ -1.36
UBE3D-205ENST00000503942 ARHGEF39Q8N4T4 335 aa6.53□□□□□ -1.36
UBE3D-205ENST00000503942 DPF3Q92784 378 aa6.53□□□□□ -1.36
UBE3D-205ENST00000503942 SPATA9Q9BWV2 254 aa6.53□□□□□ -1.36
UBE3D-205ENST00000503942 TCAF1Q9Y4C2 921 aa6.53□□□□□ -1.36
UBE3D-205ENST00000503942 A0A1W2PQU0 124 aa6.52□□□□□ -1.37
UBE3D-205ENST00000503942 MUSKO15146 869 aa6.52□□□□□ -1.37
UBE3D-205ENST00000503942 TBX1O43435 398 aa6.52□□□□□ -1.37
UBE3D-205ENST00000503942 ITGAVP06756 1048 aa6.52□□□□□ -1.37
UBE3D-205ENST00000503942 FAM153BP0C7A2 387 aa6.52□□□□□ -1.37
UBE3D-205ENST00000503942 NAT2P11245 290 aa6.52□□□□□ -1.37
UBE3D-205ENST00000503942 STAT5AP42229 794 aa6.52□□□□□ -1.37
UBE3D-205ENST00000503942 PPP2CBP62714 309 aa6.52□□□□□ -1.37
UBE3D-205ENST00000503942 PPP2CAP67775 309 aa6.52□□□□□ -1.37
UBE3D-205ENST00000503942 SQSTM1Q13501 440 aa6.52□□□□□ -1.37
UBE3D-205ENST00000503942 CR1LQ2VPA4 569 aa6.52□□□□□ -1.37
UBE3D-205ENST00000503942 C2orf27AQ580R0 203 aa6.52□□□□□ -1.37
UBE3D-205ENST00000503942 SPDYAQ5MJ70 313 aa6.52□□□□□ -1.37
UBE3D-205ENST00000503942 ZNF227Q86WZ6 799 aa6.52□□□□□ -1.37
UBE3D-205ENST00000503942 FAM177A1Q8N128 213 aaPredicted RBP6.52□□□□□ -1.37
UBE3D-205ENST00000503942 RCC1LQ96I51 464 aaKnown RBP6.52□□□□□ -1.37
UBE3D-205ENST00000503942 MRGPRX3Q96LB0 322 aa6.52□□□□□ -1.37
UBE3D-205ENST00000503942 SEMA4AQ9H3S1 761 aa6.52□□□□□ -1.37
UBE3D-205ENST00000503942 NGRNQ9NPE2 291 aaKnown RBP6.52□□□□□ -1.37
UBE3D-205ENST00000503942 THBDP07204 575 aa6.51□□□□□ -1.37
UBE3D-205ENST00000503942 SLFN13Q68D06 897 aa6.51□□□□□ -1.37
UBE3D-205ENST00000503942 BVESQ8NE79 360 aa6.51□□□□□ -1.37
UBE3D-205ENST00000503942 THAP3Q8WTV1 239 aaPredicted RBP6.51□□□□□ -1.37
UBE3D-205ENST00000503942 SGSM3Q96HU1 749 aa6.51□□□□□ -1.37
UBE3D-205ENST00000503942 MMP19Q99542 508 aa6.51□□□□□ -1.37
UBE3D-205ENST00000503942 TMEM168Q9H0V1 697 aa6.51□□□□□ -1.37
UBE3D-205ENST00000503942 L2HGDHQ9H9P8 463 aa6.51□□□□□ -1.37
UBE3D-205ENST00000503942 ARHGEF4Q9NR80 690 aa6.51□□□□□ -1.37
UBE3D-205ENST00000503942 CLEC1BQ9P126 229 aa6.51□□□□□ -1.37
UBE3D-205ENST00000503942 EMC9Q9Y3B6 208 aa6.51□□□□□ -1.37
UBE3D-205ENST00000503942 TESMINQ9Y4I5 508 aa6.51□□□□□ -1.37
UBE3D-205ENST00000503942 ESYT3A0FGR9 886 aa6.5□□□□□ -1.37
UBE3D-205ENST00000503942 IQCA1LA6NCM1 817 aa6.5□□□□□ -1.37
UBE3D-205ENST00000503942 FOXB2Q5VYV0 432 aa6.5□□□□□ -1.37
UBE3D-205ENST00000503942 ARHGEF18Q6ZSZ5 1173 aa6.5□□□□□ -1.37
UBE3D-205ENST00000503942 MILR1Q7Z6M3 343 aa6.5□□□□□ -1.37
UBE3D-205ENST00000503942 TEX2Q8IWB9 1127 aa6.5□□□□□ -1.37
UBE3D-205ENST00000503942 KBTBD2Q8IY47 623 aa6.5□□□□□ -1.37
UBE3D-205ENST00000503942 LRRC47Q8N1G4 583 aaKnown RBP6.5□□□□□ -1.37
UBE3D-205ENST00000503942 ZBTB38Q8NAP3 1195 aaPredicted RBP6.5□□□□□ -1.37
UBE3D-205ENST00000503942 SUGT1Q9Y2Z0 365 aa6.5□□□□□ -1.37
UBE3D-205ENST00000503942 CCDC180Q9P1Z9 1646 aa6.5□□□□□ -1.37
UBE3D-205ENST00000503942 C22orf46C9J442 243 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 ENPP3O14638 875 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 PLS3P13797 630 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 IL13P35225 146 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 GRIA2P42262 883 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 PPP2R2AP63151 447 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 NKX3-2P78367 333 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 RIOX2Q8IUF8 465 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 TRIM59Q8IWR1 403 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 COPS5Q92905 334 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 PPP1R14AQ96A00 147 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 MEGF9Q9H1U4 602 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 JADE2Q9NQC1 790 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 TMEM260Q9NX78 707 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 LRP2BPQ9P2M1 347 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 AKT3Q9Y243 479 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 PTCH2Q9Y6C5 1203 aa6.49□□□□□ -1.37
UBE3D-205ENST00000503942 AGRPO00253 132 aa6.48□□□□□ -1.37
UBE3D-205ENST00000503942 ZNF623O75123 536 aa6.48□□□□□ -1.37
UBE3D-205ENST00000503942 MLLT6P55198 1093 aaPredicted RBP6.48□□□□□ -1.37
UBE3D-205ENST00000503942 YOD1Q5VVQ6 348 aaPredicted RBP6.48□□□□□ -1.37
UBE3D-205ENST00000503942 EGFLAMQ63HQ2 1017 aa6.48□□□□□ -1.37
UBE3D-205ENST00000503942 PTPN18Q99952 460 aa6.48□□□□□ -1.37
UBE3D-205ENST00000503942 NOP56O00567 594 aaKnown RBP6.47□□□□□ -1.37
UBE3D-205ENST00000503942 KCNH1O95259 989 aa6.47□□□□□ -1.37
UBE3D-205ENST00000503942 CYP4F3Q08477 520 aa6.47□□□□□ -1.37
UBE3D-205ENST00000503942 HSP90AA2PQ14568 343 aaPredicted RBP6.47□□□□□ -1.37
UBE3D-205ENST00000503942 LONRF2Q1L5Z9 754 aa6.47□□□□□ -1.37
UBE3D-205ENST00000503942 MROH9Q5TGP6 573 aa6.47□□□□□ -1.37
UBE3D-205ENST00000503942 BTN2A2Q8WVV5 523 aa6.47□□□□□ -1.37
UBE3D-205ENST00000503942 ZCCHC14Q8WYQ9 949 aaKnown RBP6.47□□□□□ -1.37
UBE3D-205ENST00000503942 EXOC2Q96KP1 924 aa6.47□□□□□ -1.37
UBE3D-205ENST00000503942 ZSWIM3Q96MP5 696 aa6.47□□□□□ -1.37
UBE3D-205ENST00000503942 CLIC6Q96NY7 704 aa6.47□□□□□ -1.37
UBE3D-205ENST00000503942 YIPF4Q9BSR8 244 aa6.47□□□□□ -1.37
UBE3D-205ENST00000503942 FANCLQ9NW38 375 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms