RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 CLTBP09497 229 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 FAM86B2P0C5J1 330 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 ZNF286BP0CG31 522 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 ARP10275 920 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 KCNA2P16389 499 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 MCM2P49736 904 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 CDK7P50613 346 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 USP11P51784 963 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 HMGN5P82970 282 aaKnown RBP8.31□□□□□ -1.08
USP46-203ENST00000502443 TRIM29Q14134 588 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 NBPF20Q3BBV1 942 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 PRR16Q569H4 304 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 FAM47CQ5HY64 1035 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 NIPA1Q7RTP0 329 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 ANKRD33Q7Z3H0 272 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 PLA2G4DQ86XP0 818 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 OXER1Q8TDS5 423 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 TBCKQ8TEA7 893 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 TMX3Q96JJ7 454 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 TOX2Q96NM4 488 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 SEZ6LQ9BYH1 1024 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 AGO4Q9HCK5 861 aaKnown RBP8.31□□□□□ -1.08
USP46-203ENST00000502443 BRMS1Q9HCU9 246 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 TMEM39AQ9NV64 488 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 SCN10AQ9Y5Y9 1956 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 IGLV3-22A0A075B6J6 115 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 TLR3O15455 904 aaKnown RBP8.3□□□□□ -1.08
USP46-203ENST00000502443 KRT2P35908 639 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 SETQ01105 290 aaPredicted RBP8.3□□□□□ -1.08
USP46-203ENST00000502443 FAAP100Q0VG06 881 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 NONOQ15233 471 aaKnown RBP eCLIP8.3□□□□□ -1.08
USP46-203ENST00000502443 INF2Q27J81 1249 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 KRT40Q6A162 431 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 NFRKBQ6P4R8 1299 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 PPP4R3CPQ6ZMV5 832 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 KRT25Q7Z3Z0 450 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 SH3RF1Q7Z6J0 888 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 FAM126BQ8IXS8 530 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 FAM184AQ8NB25 1140 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 SLC43A3Q8NBI5 491 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 PPP1R13LQ8WUF5 828 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 KAT2BQ92831 832 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 C8orf76Q96K31 380 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 UIMC1Q96RL1 719 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 GPR20Q99678 358 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 LBHD1Q9BQE6 289 aaPredicted RBP8.3□□□□□ -1.08
USP46-203ENST00000502443 SDF4Q9BRK5 362 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 KATNAL1Q9BW62 490 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 JPH1Q9HDC5 661 aaPredicted RBP8.3□□□□□ -1.08
USP46-203ENST00000502443 PDLIM7Q9NR12 457 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 PCDH10Q9P2E7 1040 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 SLC9A2Q9UBY0 812 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 TELO2Q9Y4R8 837 aa8.3□□□□□ -1.08
USP46-203ENST00000502443 TRIM43BA6NCK2 446 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 BTBD18B2RXH4 712 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 H3BRB1 525 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 DDX39AO00148 427 aaKnown RBP8.29□□□□□ -1.08
USP46-203ENST00000502443 IPO5O00410 1097 aaKnown RBP8.29□□□□□ -1.08
USP46-203ENST00000502443 EDIL3O43854 480 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 B4GALT4O60513 344 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 F2P00734 622 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 CD4P01730 458 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 MMP1P03956 469 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 LGALS2P05162 132 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 HOXD8P13378 290 aaPredicted RBP8.29□□□□□ -1.08
USP46-203ENST00000502443 CIITAP33076 1130 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 TCF7P36402 384 aaPredicted RBP8.29□□□□□ -1.08
USP46-203ENST00000502443 PSEN2P49810 448 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 MDM2Q00987 491 aaPredicted RBP8.29□□□□□ -1.08
USP46-203ENST00000502443 GUCY1B3Q02153 619 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 NR5A1Q13285 461 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 ITGB3BPQ13352 177 aaPredicted RBP8.29□□□□□ -1.08
USP46-203ENST00000502443 MFSD10Q14728 455 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 SAFBQ15424 915 aaKnown RBP eCLIP8.29□□□□□ -1.08
USP46-203ENST00000502443 KIAA0753Q2KHM9 967 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 UTP14CQ5TAP6 766 aaKnown RBP8.29□□□□□ -1.08
USP46-203ENST00000502443 PIK3AP1Q6ZUJ8 805 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 C7orf31Q8N865 590 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 SEPT1Q8WYJ6 367 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 TRIM43Q96BQ3 446 aaPredicted RBP8.29□□□□□ -1.08
USP46-203ENST00000502443 ZNF577Q9BSK1 485 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 C16orf70Q9BSU1 422 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 TRPV6Q9H1D0 765 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 TUT1Q9H6E5 874 aaKnown RBP8.29□□□□□ -1.08
USP46-203ENST00000502443 TSHZ2Q9NRE2 1034 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 TRMT13Q9NUP7 481 aaKnown RBP8.29□□□□□ -1.08
USP46-203ENST00000502443 NFASCO94856 1347 aa8.29□□□□□ -1.08
USP46-203ENST00000502443 GSTTP1A0A1W2PQM5 241 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 HAS3O00219 553 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 KIAA0355O15063 1070 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 TDP2O95551 362 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 SUPT20HL2P0C7V6 817 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 RAG1P15918 1043 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 MAGEA10P43363 369 aaPredicted RBP8.28□□□□□ -1.08
USP46-203ENST00000502443 ACTR2P61160 394 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 PTPN11Q06124 597 aaPredicted RBP8.28□□□□□ -1.08
USP46-203ENST00000502443 LETM2Q2VYF4 491 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 EARS2Q5JPH6 523 aaKnown RBP8.28□□□□□ -1.08
USP46-203ENST00000502443 CHRDL2Q6WN34 429 aa8.28□□□□□ -1.08
USP46-203ENST00000502443 NEK8Q86SG6 692 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms