RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 ASIC1P78348 528 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 PDE4DQ08499 809 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 SREBF2Q12772 1141 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 TPD52L1Q16890 204 aaPredicted RBP9.44□□□□□ -0.9
SF3A1-210ENST00000498259 DPCR1Q3MIW9 517 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 TMEM119Q4V9L6 283 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 DLK2Q6UY11 383 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 SLC30A10Q6XR72 485 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 STXBP4Q6ZWJ1 553 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 REM2Q8IYK8 340 aaPredicted RBP9.44□□□□□ -0.9
SF3A1-210ENST00000498259 ABRAQ8N0Z2 381 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 ZNF526Q8TF50 670 aaPredicted RBP9.44□□□□□ -0.9
SF3A1-210ENST00000498259 CCDC43Q96MW1 224 aaKnown RBP9.44□□□□□ -0.9
SF3A1-210ENST00000498259 MMP19Q99542 508 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 ZSWIM4Q9H7M6 989 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 AGO4Q9HCK5 861 aaKnown RBP9.44□□□□□ -0.9
SF3A1-210ENST00000498259 NMRK2Q9NPI5 230 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 KCNG1Q9UIX4 513 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 KIAA1024Q9UPX6 916 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 NFASCO94856 1347 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.43□□□□□ -0.9
SF3A1-210ENST00000498259 ASB14A6NK59 587 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 PP2D1A8MPX8 630 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 WDR64B1ANS9 1081 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 EDIL3O43854 480 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 RHOBTB3O94955 611 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 P4HBP07237 508 aaKnown RBP9.43□□□□□ -0.9
SF3A1-210ENST00000498259 TPM2P07951 284 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 PLA2G4BP0C869 781 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 POTEIP0CG38 1075 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 POTEJP0CG39 1038 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 ITGB5P18084 799 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 ERCC3P19447 782 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 CDK11BP21127 795 aaKnown RBP9.43□□□□□ -0.9
SF3A1-210ENST00000498259 MAPK4P31152 587 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 ERVK-9P63128 1117 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 ERVK-24P63145 666 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 GRB10Q13322 594 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 NEDD9Q14511 834 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 WDR78Q5VTH9 848 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 GPAT2Q6NUI2 795 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 ZNF746Q6NUN9 644 aaPredicted RBP9.43□□□□□ -0.9
SF3A1-210ENST00000498259 RGMBQ6NW40 437 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 UNC13DQ70J99 1090 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 OTUD6AQ7L8S5 288 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 MIER3Q7Z3K6 550 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.43□□□□□ -0.9
SF3A1-210ENST00000498259 LUZP1Q86V48 1076 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 ENOX1Q8TC92 643 aaKnown RBP9.43□□□□□ -0.9
SF3A1-210ENST00000498259 NOC3LQ8WTT2 800 aaKnown RBP9.43□□□□□ -0.9
SF3A1-210ENST00000498259 ATP6V0A1Q93050 837 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 DHTKD1Q96HY7 919 aaPredicted RBP9.43□□□□□ -0.9
SF3A1-210ENST00000498259 HHIPL1Q96JK4 782 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 MS4A4AQ96JQ5 239 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 INPP4AQ96PE3 977 aaPredicted RBP9.43□□□□□ -0.9
SF3A1-210ENST00000498259 CTAGE1Q96RT6 745 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 SENP7Q9BQF6 1050 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 EIF2AK1Q9BQI3 630 aaKnown RBP9.43□□□□□ -0.9
SF3A1-210ENST00000498259 MMTAG2Q9BU76 263 aaKnown RBP9.43□□□□□ -0.9
SF3A1-210ENST00000498259 TIPINQ9BVW5 301 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 MOV10L1Q9BXT6 1211 aaKnown RBP9.43□□□□□ -0.9
SF3A1-210ENST00000498259 TRIM9Q9C026 710 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 TRIM5Q9C035 493 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 BTBD7Q9P203 1132 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 COL20A1Q9P218 1284 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 VAV3Q9UKW4 847 aa9.43□□□□□ -0.9
SF3A1-210ENST00000498259 LOC285556D6RIA3 1793 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 EYA4O95677 639 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 SSBP05455 408 aaKnown RBP eCLIP9.42□□□□□ -0.9
SF3A1-210ENST00000498259 PTMAP06454 111 aaKnown RBP9.42□□□□□ -0.9
SF3A1-210ENST00000498259 PSAPP07602 524 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 PRKCSHP14314 528 aaPredicted RBP9.42□□□□□ -0.9
SF3A1-210ENST00000498259 ICAM3P32942 547 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 ABCD1P33897 745 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 QARSP47897 775 aaKnown RBP9.42□□□□□ -0.9
SF3A1-210ENST00000498259 UBXN2AP68543 259 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 MRPS9P82933 396 aaKnown RBP9.42□□□□□ -0.9
SF3A1-210ENST00000498259 SPAG1Q07617 926 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 SPIRE1Q08AE8 756 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 CUL4BQ13620 913 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 MOGSQ13724 837 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 IQCB1Q15051 598 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 COBLL1Q53SF7 1204 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 HS1BP3Q53T59 392 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 NAALADL2Q58DX5 795 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 SARM1Q6SZW1 724 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 CATSPER3Q86XQ3 398 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 FAM114A1Q8IWE2 563 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 TPH2Q8IWU9 490 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 AOPEPQ8N6M6 819 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 SYT2Q8N9I0 419 aaPredicted RBP9.42□□□□□ -0.9
SF3A1-210ENST00000498259 SLC17A8Q8NDX2 589 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 CYP2W1Q8TAV3 490 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 PPP1R9BQ96SB3 815 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 PLIN2Q99541 437 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 HSD17B14Q9BPX1 270 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 RBPJLQ9UBG7 517 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 MORF4L1Q9UBU8 362 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 RWDD2AQ9UIY3 292 aa9.42□□□□□ -0.9
SF3A1-210ENST00000498259 PCDHA10Q9Y5I2 948 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms