RNA–Protein interactions for RNA: ENST00000498044.6

CBWD1-218, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-218ENST00000498044 SIT1Q9Y3P8 196 aa6.96□□□□□ -1.3
CBWD1-218ENST00000498044 PCDHB4Q9Y5E5 795 aa6.96□□□□□ -1.3
CBWD1-218ENST00000498044 TRAF5O00463 557 aa6.95□□□□□ -1.3
CBWD1-218ENST00000498044 GAS7O60861 476 aa6.95□□□□□ -1.3
CBWD1-218ENST00000498044 F2P00734 622 aa6.95□□□□□ -1.3
CBWD1-218ENST00000498044 AMY2AP04746 511 aa6.95□□□□□ -1.3
CBWD1-218ENST00000498044 AMY2BP19961 511 aa6.95□□□□□ -1.3
CBWD1-218ENST00000498044 MECP2P51608 486 aaKnown RBP6.95□□□□□ -1.3
CBWD1-218ENST00000498044 PRR5P85299 388 aa6.95□□□□□ -1.3
CBWD1-218ENST00000498044 NFKB2Q00653 900 aa6.95□□□□□ -1.3
CBWD1-218ENST00000498044 ZC3H14Q6PJT7 736 aaKnown RBP6.95□□□□□ -1.3
CBWD1-218ENST00000498044 ZNF552Q9H707 407 aaPredicted RBP6.95□□□□□ -1.3
CBWD1-218ENST00000498044 SRPK3Q9UPE1 567 aa6.95□□□□□ -1.3
CBWD1-218ENST00000498044 NOP58Q9Y2X3 529 aaKnown RBP6.95□□□□□ -1.3
CBWD1-218ENST00000498044 TCRBV5S4A2TA0A5A2 114 aa6.94□□□□□ -1.3
CBWD1-218ENST00000498044 SLC12A8A0AV02 714 aa6.94□□□□□ -1.3
CBWD1-218ENST00000498044 PTPDC1A2A3K4 754 aa6.94□□□□□ -1.3
CBWD1-218ENST00000498044 ZNF503-AS2A6NEH8 195 aa6.94□□□□□ -1.3
CBWD1-218ENST00000498044 PLEKHN1Q494U1 663 aaPredicted RBP6.94□□□□□ -1.3
CBWD1-218ENST00000498044 FIGNQ5HY92 759 aa6.94□□□□□ -1.3
CBWD1-218ENST00000498044 HHIPL2Q6UWX4 724 aa6.94□□□□□ -1.3
CBWD1-218ENST00000498044 OTOP1Q7RTM1 612 aa6.94□□□□□ -1.3
CBWD1-218ENST00000498044 PTRH1Q86Y79 214 aaKnown RBP6.94□□□□□ -1.3
CBWD1-218ENST00000498044 LIN37Q96GY3 246 aaPredicted RBP6.94□□□□□ -1.3
CBWD1-218ENST00000498044 BOCQ9BWV1 1114 aa6.94□□□□□ -1.3
CBWD1-218ENST00000498044 SMURF1Q9HCE7 757 aa6.94□□□□□ -1.3
CBWD1-218ENST00000498044 ASH2LQ9UBL3 628 aa6.94□□□□□ -1.3
CBWD1-218ENST00000498044 CARMIL2Q6F5E8 1435 aa6.93□□□□□ -1.3
CBWD1-218ENST00000498044 hCG_2014768A0A024R1R8 64 aa6.93□□□□□ -1.3
CBWD1-218ENST00000498044 TCRBV5S2A0A599 114 aa6.93□□□□□ -1.3
CBWD1-218ENST00000498044 MAN2B1O00754 1011 aa6.93□□□□□ -1.3
CBWD1-218ENST00000498044 SLC27A2O14975 620 aa6.93□□□□□ -1.3
CBWD1-218ENST00000498044 EPHA5P54756 1037 aa6.93□□□□□ -1.3
CBWD1-218ENST00000498044 ANAPC15P60006 121 aa6.93□□□□□ -1.3
CBWD1-218ENST00000498044 AMPD3Q01432 767 aa6.93□□□□□ -1.3
CBWD1-218ENST00000498044 TUSC3Q13454 348 aa6.93□□□□□ -1.3
CBWD1-218ENST00000498044 SEPT7Q16181 437 aaKnown RBP6.93□□□□□ -1.3
CBWD1-218ENST00000498044 KCTD1Q719H9 257 aa6.93□□□□□ -1.3
CBWD1-218ENST00000498044 AFAP1L2Q8N4X5 818 aa6.93□□□□□ -1.3
CBWD1-218ENST00000498044 SH3RF2Q8TEC5 729 aa6.93□□□□□ -1.3
CBWD1-218ENST00000498044 USP7Q93009 1102 aa6.93□□□□□ -1.3
CBWD1-218ENST00000498044 GPATCH3Q96I76 525 aa6.93□□□□□ -1.3
CBWD1-218ENST00000498044 PDGFDQ9GZP0 370 aaPredicted RBP6.93□□□□□ -1.3
CBWD1-218ENST00000498044 ATP23Q9Y6H3 246 aa6.93□□□□□ -1.3
CBWD1-218ENST00000498044 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.92□□□□□ -1.3
CBWD1-218ENST00000498044 CLASP2O75122 1294 aaKnown RBP6.92□□□□□ -1.3
CBWD1-218ENST00000498044 HIP1RO75146 1068 aa6.92□□□□□ -1.3
CBWD1-218ENST00000498044 TAL1P17542 331 aaPredicted RBP6.92□□□□□ -1.3
CBWD1-218ENST00000498044 GJA4P35212 333 aa6.92□□□□□ -1.3
CBWD1-218ENST00000498044 IGBP1P78318 339 aa6.92□□□□□ -1.3
CBWD1-218ENST00000498044 OCRLQ01968 901 aa6.92□□□□□ -1.3
CBWD1-218ENST00000498044 DSG1Q02413 1049 aa6.92□□□□□ -1.3
CBWD1-218ENST00000498044 STRN3Q13033 797 aa6.92□□□□□ -1.3
CBWD1-218ENST00000498044 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.92□□□□□ -1.3
CBWD1-218ENST00000498044 ZNF605Q86T29 641 aa6.92□□□□□ -1.3
CBWD1-218ENST00000498044 NXPE1Q8N323 547 aa6.92□□□□□ -1.3
CBWD1-218ENST00000498044 ALG3Q92685 438 aa6.92□□□□□ -1.3
CBWD1-218ENST00000498044 TTC1Q99614 292 aa6.92□□□□□ -1.3
CBWD1-218ENST00000498044 CD244Q9BZW8 370 aa6.92□□□□□ -1.3
CBWD1-218ENST00000498044 EPB41L4BQ9H329 900 aa6.92□□□□□ -1.3
CBWD1-218ENST00000498044 NSUN3Q9H649 340 aaKnown RBP6.92□□□□□ -1.3
CBWD1-218ENST00000498044 DCP1AQ9NPI6 582 aaPredicted RBP6.92□□□□□ -1.3
CBWD1-218ENST00000498044 MCM8Q9UJA3 840 aa6.92□□□□□ -1.3
CBWD1-218ENST00000498044 ATP8A1Q9Y2Q0 1164 aa6.92□□□□□ -1.3
CBWD1-218ENST00000498044 ZNF891A8MT65 544 aaPredicted RBP6.91□□□□□ -1.3
CBWD1-218ENST00000498044 H7C1D1 291 aa6.91□□□□□ -1.3
CBWD1-218ENST00000498044 ZEB2O60315 1214 aa6.91□□□□□ -1.3
CBWD1-218ENST00000498044 BRINP1O60477 761 aa6.91□□□□□ -1.3
CBWD1-218ENST00000498044 PEX10O60683 326 aa6.91□□□□□ -1.3
CBWD1-218ENST00000498044 VIPR1P32241 457 aa6.91□□□□□ -1.3
CBWD1-218ENST00000498044 SRSF3P84103 164 aaKnown RBP6.91□□□□□ -1.3
CBWD1-218ENST00000498044 IRF9Q00978 393 aa6.91□□□□□ -1.3
CBWD1-218ENST00000498044 TMC6Q7Z403 805 aa6.91□□□□□ -1.3
CBWD1-218ENST00000498044 STRA8Q7Z7C7 330 aa6.91□□□□□ -1.3
CBWD1-218ENST00000498044 ANKRD13AQ8IZ07 590 aa6.91□□□□□ -1.3
CBWD1-218ENST00000498044 ATL2Q8NHH9 583 aa6.91□□□□□ -1.3
CBWD1-218ENST00000498044 CLEC4DQ8WXI8 215 aa6.91□□□□□ -1.3
CBWD1-218ENST00000498044 PUS7Q96PZ0 661 aaKnown RBP6.91□□□□□ -1.3
CBWD1-218ENST00000498044 DIRC2Q96SL1 478 aa6.91□□□□□ -1.3
CBWD1-218ENST00000498044 YIPF4Q9BSR8 244 aa6.91□□□□□ -1.3
CBWD1-218ENST00000498044 IFT22Q9H7X7 185 aa6.91□□□□□ -1.3
CBWD1-218ENST00000498044 SIRT5Q9NXA8 310 aa6.91□□□□□ -1.3
CBWD1-218ENST00000498044 HCFC2Q9Y5Z7 792 aa6.91□□□□□ -1.3
CBWD1-218ENST00000498044 KCNK3O14649 394 aa6.9□□□□□ -1.3
CBWD1-218ENST00000498044 KRT37O76014 449 aa6.9□□□□□ -1.3
CBWD1-218ENST00000498044 ZBTB48P10074 688 aaPredicted RBP6.9□□□□□ -1.3
CBWD1-218ENST00000498044 IL2P60568 153 aa6.9□□□□□ -1.3
CBWD1-218ENST00000498044 ZNF174Q15697 407 aa6.9□□□□□ -1.3
CBWD1-218ENST00000498044 SKOR2Q2VWA4 1001 aaPredicted RBP6.9□□□□□ -1.3
CBWD1-218ENST00000498044 BTBD8Q5XKL5 378 aa6.9□□□□□ -1.3
CBWD1-218ENST00000498044 TMEM132EQ6IEE7 984 aa6.9□□□□□ -1.3
CBWD1-218ENST00000498044 PRR23BQ6ZRT6 265 aa6.9□□□□□ -1.3
CBWD1-218ENST00000498044 C11orf74Q86VG3 221 aa6.9□□□□□ -1.3
CBWD1-218ENST00000498044 RBM12BQ8IXT5 1001 aaKnown RBP6.9□□□□□ -1.3
CBWD1-218ENST00000498044 ARRDC4Q8NCT1 418 aa6.9□□□□□ -1.3
CBWD1-218ENST00000498044 SMC1BQ8NDV3 1235 aa6.9□□□□□ -1.3
CBWD1-218ENST00000498044 TTLL11Q8NHH1 800 aa6.9□□□□□ -1.3
CBWD1-218ENST00000498044 NGRNQ9NPE2 291 aaKnown RBP6.9□□□□□ -1.3
CBWD1-218ENST00000498044 THG1LQ9NWX6 298 aaKnown RBP6.9□□□□□ -1.3
CBWD1-218ENST00000498044 LRRC10BA6NIK2 292 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms